BLASTX nr result

ID: Coptis21_contig00001016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001016
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526507.1| malic enzyme, putative [Ricinus communis] gi...   122   4e-26
ref|XP_002302483.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_002265765.1| PREDICTED: NAD-dependent malic enzyme 62 kDa...   118   6e-25
ref|XP_002326881.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
sp|P37221.1|MAOM_SOLTU RecName: Full=NAD-dependent malic enzyme ...   107   8e-22

>ref|XP_002526507.1| malic enzyme, putative [Ricinus communis]
           gi|223534182|gb|EEF35898.1| malic enzyme, putative
           [Ricinus communis]
          Length = 626

 Score =  122 bits (305), Expect = 4e-26
 Identities = 62/98 (63%), Positives = 79/98 (80%), Gaps = 4/98 (4%)
 Frame = -1

Query: 283 MSNFSHQLRLTSSSLVKRLRNQMS----MFERRSFTSTEGSRPSIVHKRSIDILHDPWFN 116
           MSNFS+Q+R  S+SL+KRL+++++    + + RSFT+TEG RP+IVHKRS+DILHDPWFN
Sbjct: 1   MSNFSNQIR-ASASLIKRLKDRLANPALLNQSRSFTTTEGHRPTIVHKRSLDILHDPWFN 59

Query: 115 KGTAFSMTEXXXXXXXXXLPPSVMSSQQQIERFMVDLK 2
           KGTAFSMTE         LPP++MSS+QQIERFM DLK
Sbjct: 60  KGTAFSMTERDRLDLRGLLPPNIMSSEQQIERFMADLK 97


>ref|XP_002302483.1| predicted protein [Populus trichocarpa] gi|222844209|gb|EEE81756.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score =  119 bits (299), Expect = 2e-25
 Identities = 64/99 (64%), Positives = 76/99 (76%), Gaps = 5/99 (5%)
 Frame = -1

Query: 283 MSNFSHQLRLTSSSLVKRLRNQMS-----MFERRSFTSTEGSRPSIVHKRSIDILHDPWF 119
           M NFS+Q+R  SSSL+KRL+ +M+     M   RSFT+ EG RP+IVHKRS+DILHDPWF
Sbjct: 1   MPNFSNQIR-ASSSLIKRLQQRMTNPAALMQATRSFTTLEGHRPTIVHKRSLDILHDPWF 59

Query: 118 NKGTAFSMTEXXXXXXXXXLPPSVMSSQQQIERFMVDLK 2
           NKGTAFSMTE         LPP+VMSS+QQI+RFMVDLK
Sbjct: 60  NKGTAFSMTERDRLDIRGLLPPNVMSSEQQIQRFMVDLK 98


>ref|XP_002265765.1| PREDICTED: NAD-dependent malic enzyme 62 kDa isoform, mitochondrial
           [Vitis vinifera] gi|297734678|emb|CBI16729.3| unnamed
           protein product [Vitis vinifera]
          Length = 625

 Score =  118 bits (295), Expect = 6e-25
 Identities = 62/97 (63%), Positives = 75/97 (77%), Gaps = 3/97 (3%)
 Frame = -1

Query: 283 MSNFSHQLRLTSSSLVKRLRNQMS---MFERRSFTSTEGSRPSIVHKRSIDILHDPWFNK 113
           MSNF  Q++L SS L++RL+++ S   +  RRSFT+TEG RPS+VHKRS+DILHDPWFNK
Sbjct: 1   MSNFCRQIKLPSS-LIRRLKHRSSNSMLSGRRSFTTTEGHRPSLVHKRSLDILHDPWFNK 59

Query: 112 GTAFSMTEXXXXXXXXXLPPSVMSSQQQIERFMVDLK 2
           GTAFSMTE         LPP+VMS + QIERFMVDLK
Sbjct: 60  GTAFSMTERDRLDLRGLLPPTVMSPEMQIERFMVDLK 96


>ref|XP_002326881.1| predicted protein [Populus trichocarpa] gi|222835196|gb|EEE73631.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score =  115 bits (287), Expect = 5e-24
 Identities = 61/99 (61%), Positives = 74/99 (74%), Gaps = 5/99 (5%)
 Frame = -1

Query: 283 MSNFSHQLRLTSSSLVKRLRNQMS-----MFERRSFTSTEGSRPSIVHKRSIDILHDPWF 119
           MSNFS+Q+R  SSSL+KRL+ +M+     M   R FT+ EG RP+IVHKRS+DILHDPWF
Sbjct: 1   MSNFSNQIR-ASSSLIKRLKQRMTNPAALMQATRHFTTLEGHRPTIVHKRSLDILHDPWF 59

Query: 118 NKGTAFSMTEXXXXXXXXXLPPSVMSSQQQIERFMVDLK 2
           NKGTAFSMTE         LPP+VM+S+QQI+RF  DLK
Sbjct: 60  NKGTAFSMTERDRLDLRGLLPPNVMTSEQQIQRFAADLK 98


>sp|P37221.1|MAOM_SOLTU RecName: Full=NAD-dependent malic enzyme 62 kDa isoform,
           mitochondrial; Short=NAD-ME; Flags: Precursor
           gi|438249|emb|CAA80559.1| malate dehydrogenase [Solanum
           tuberosum]
          Length = 626

 Score =  107 bits (268), Expect = 8e-22
 Identities = 58/98 (59%), Positives = 72/98 (73%), Gaps = 4/98 (4%)
 Frame = -1

Query: 283 MSNFSHQLRLTSSSLVKRLRNQMSMF----ERRSFTSTEGSRPSIVHKRSIDILHDPWFN 116
           M+ FS+Q+RL SS+L+KRL  +++        R+FT+TEG RP+IVHKRS+DILHDPWFN
Sbjct: 1   MAIFSNQMRL-SSTLLKRLHQRVAAAVNSSSSRNFTTTEGHRPTIVHKRSLDILHDPWFN 59

Query: 115 KGTAFSMTEXXXXXXXXXLPPSVMSSQQQIERFMVDLK 2
           KGTAFS TE         LPP+VMS +QQI RFM DLK
Sbjct: 60  KGTAFSFTERDRLHIRGLLPPNVMSFEQQIARFMADLK 97