BLASTX nr result

ID: Coptis21_contig00001003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001003
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269322.1| PREDICTED: uncharacterized protein At4g22758...   172   8e-41
emb|CAN83835.1| hypothetical protein VITISV_009604 [Vitis vinifera]   168   2e-39
ref|XP_004145782.1| PREDICTED: uncharacterized protein LOC101204...   167   4e-39
ref|XP_002880964.1| hypothetical protein ARALYDRAFT_481720 [Arab...   166   1e-38
ref|XP_002328077.1| predicted protein [Populus trichocarpa] gi|2...   165   1e-38

>ref|XP_002269322.1| PREDICTED: uncharacterized protein At4g22758 [Vitis vinifera]
          Length = 196

 Score =  172 bits (437), Expect = 8e-41
 Identities = 94/165 (56%), Positives = 115/165 (69%), Gaps = 5/165 (3%)
 Frame = -2

Query: 653 AASFHG---RNQANQPILRRPKTDPDLLSNRKLAGMLSETMPKLTKLLLNVTIERSLGAV 483
           ++SFH       A Q  LRRPKT PDLLS R ++G+  E  P+LTKLLLNVT++RSLG V
Sbjct: 24  SSSFHSGIPMTMAPQAELRRPKTLPDLLSGRSVSGLSPEGGPRLTKLLLNVTVQRSLGPV 83

Query: 482 HVVMSPESTVGDLVAAAVRQYNKEGRRPFLSTPEASHFDLHYSPFSLESLDREEKLLKLG 303
            VVMSP+STVGDL+AA +RQY KEGRR  L T + + FDLHYS FSLESLDR EKL+ LG
Sbjct: 84  QVVMSPDSTVGDLIAAVLRQYAKEGRRLVLPTTDPAGFDLHYSQFSLESLDRNEKLMTLG 143

Query: 302 SRNFFMCRSKAADAAPNSRGTSAK--CSSTCSKQAEKASKTPFEW 174
           SRNFF+C  K+      S   +++   SSTCS +A+K SK    W
Sbjct: 144 SRNFFLCCKKSEPDVGESAAEASETTSSSTCSTEADKVSKISVPW 188


>emb|CAN83835.1| hypothetical protein VITISV_009604 [Vitis vinifera]
          Length = 197

 Score =  168 bits (426), Expect = 2e-39
 Identities = 94/166 (56%), Positives = 114/166 (68%), Gaps = 6/166 (3%)
 Frame = -2

Query: 653 AASFHG---RNQANQPILRRPKTDPDLLSNRK-LAGMLSETMPKLTKLLLNVTIERSLGA 486
           ++SFH       A Q  LRRPKT PDLLS R+ ++G+  E  P+LTKLLLNVT++RSLG 
Sbjct: 24  SSSFHSGIPMTMAPQAELRRPKTLPDLLSGRRSVSGLSPEGGPRLTKLLLNVTVQRSLGP 83

Query: 485 VHVVMSPESTVGDLVAAAVRQYNKEGRRPFLSTPEASHFDLHYSPFSLESLDREEKLLKL 306
           V VVMSP+STVGDL+AA +RQY KEGRR  L T + + FDLHYS FSLESLDR EKL+ L
Sbjct: 84  VQVVMSPDSTVGDLIAAVLRQYAKEGRRLVLPTTDPAGFDLHYSQFSLESLDRNEKLMTL 143

Query: 305 GSRNFFMCRSKAADAAPNS--RGTSAKCSSTCSKQAEKASKTPFEW 174
           GSRNFF+C  K+      S    +    SSTCS +A+K SK    W
Sbjct: 144 GSRNFFLCCKKSEPDVGESAXEASETTSSSTCSTEADKVSKISVPW 189


>ref|XP_004145782.1| PREDICTED: uncharacterized protein LOC101204625 [Cucumis sativus]
           gi|449496238|ref|XP_004160081.1| PREDICTED:
           uncharacterized LOC101204625 [Cucumis sativus]
          Length = 187

 Score =  167 bits (422), Expect = 4e-39
 Identities = 93/168 (55%), Positives = 120/168 (71%), Gaps = 7/168 (4%)
 Frame = -2

Query: 653 AASFHGRNQANQP-ILRRPKTDPDLLSNRKLAGMLS----ETMPKLTKLLLNVTIERSLG 489
           ++SFHG +      +LRRPKTDP+LLS + L    S    +  PK+TKLLLNVTI+ SLG
Sbjct: 16  SSSFHGESSTKTATMLRRPKTDPELLSFKNLGLSASAPSLDGRPKMTKLLLNVTIQGSLG 75

Query: 488 AVHVVMSPESTVGDLVAAAVRQYNKEGRRPFLSTPEASHFDLHYSPFSLESLDREEKLLK 309
            V V+MSPE TV DLV+A VRQY KEGRRP L T + S FDLHYS FSLESL++EEKL+ 
Sbjct: 76  PVQVLMSPEMTVADLVSATVRQYLKEGRRPILPTADPSAFDLHYSQFSLESLNKEEKLIA 135

Query: 308 LGSRNFFMCRSKAADAAPNSRGTSAKCSSTCSKQAEKASK--TPFEWF 171
           LGSRNFF+C  K+ D   N+   ++  SS+CSK+A++++K  + F WF
Sbjct: 136 LGSRNFFLCPKKSDD---NNDLIASSSSSSCSKEAKESAKSSSSFSWF 180


>ref|XP_002880964.1| hypothetical protein ARALYDRAFT_481720 [Arabidopsis lyrata subsp.
           lyrata] gi|297326803|gb|EFH57223.1| hypothetical protein
           ARALYDRAFT_481720 [Arabidopsis lyrata subsp. lyrata]
          Length = 190

 Score =  166 bits (419), Expect = 1e-38
 Identities = 93/165 (56%), Positives = 115/165 (69%), Gaps = 5/165 (3%)
 Frame = -2

Query: 653 AASFHGRNQ---ANQPILRRPKTDPDLLSN-RKLAGMLSETMP-KLTKLLLNVTIERSLG 489
           A SFHGR     +N   LRRPKT P+L S  + + G ++E+ P +LTKLLLNVT++ SLG
Sbjct: 24  AMSFHGRGTTPVSNPGELRRPKTLPELFSTGQSITGPVTESFPPRLTKLLLNVTVQGSLG 83

Query: 488 AVHVVMSPESTVGDLVAAAVRQYNKEGRRPFLSTPEASHFDLHYSPFSLESLDREEKLLK 309
           AV +++SPESTV DL+ AA+RQY KE RRPFL   E S FDLHYS FSLES+ REEKL+ 
Sbjct: 84  AVQIIISPESTVSDLIDAAIRQYVKEARRPFLPESEPSRFDLHYSQFSLESIGREEKLIS 143

Query: 308 LGSRNFFMCRSKAADAAPNSRGTSAKCSSTCSKQAEKASKTPFEW 174
           LGSRNFF+C  K         G+S   S +CSK+AEK +KT F W
Sbjct: 144 LGSRNFFLCGRKETGGFIGG-GSS---SESCSKEAEKVAKTGFHW 184


>ref|XP_002328077.1| predicted protein [Populus trichocarpa] gi|222837592|gb|EEE75957.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  165 bits (418), Expect = 1e-38
 Identities = 87/158 (55%), Positives = 114/158 (72%), Gaps = 6/158 (3%)
 Frame = -2

Query: 653 AASFHGRNQANQPI--LRRPKTDPDLLSNRKLAGMLSETMPKLTKLLLNVTIERSLGAVH 480
           A+SFHG+  A  P   +RRPKT PDLL+ R L     E  PKLTK+L+NVT++ S+GAV 
Sbjct: 28  ASSFHGKIPAEIPEARIRRPKTLPDLLAGRNLTAKAPEVRPKLTKVLVNVTVQGSVGAVQ 87

Query: 479 VVMSPESTVGDLVAAAVRQYNKEGRRPFLSTPEASHFDLHYSPFSLESLDREEKLLKLGS 300
           V+MSPESTVG+L++AA++QY KEGRRP ++    S F+LHYS FSLESLDREEK++ LGS
Sbjct: 88  VLMSPESTVGELISAAIQQYKKEGRRPIIAND--SRFNLHYSQFSLESLDREEKVMALGS 145

Query: 299 RNFFMCRSKA----ADAAPNSRGTSAKCSSTCSKQAEK 198
           RNFF+C+ K+    A  +  S G +   S +CSK+ EK
Sbjct: 146 RNFFLCQKKSGMDGASCSSGSGGLTTTSSPSCSKEVEK 183


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