BLASTX nr result
ID: Coptis21_contig00000979
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00000979
(1733 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003537681.1| PREDICTED: ubiquilin-1-like [Glycine max] 188 1e-92
ref|XP_003612325.1| Ubiquilin [Medicago truncatula] gi|355513660... 184 2e-87
ref|XP_003519686.1| PREDICTED: ubiquilin-1-like [Glycine max] 182 6e-87
ref|XP_003629155.1| Ubiquilin-1 [Medicago truncatula] gi|3555231... 182 5e-84
ref|XP_003612326.1| Ubiquilin [Medicago truncatula] gi|355513661... 184 3e-61
>ref|XP_003537681.1| PREDICTED: ubiquilin-1-like [Glycine max]
Length = 541
Score = 188 bits (478), Expect(2) = 1e-92
Identities = 89/109 (81%), Positives = 104/109 (95%)
Frame = -1
Query: 1298 NSDMMRDIMNMPAIQNMMNNGDIVRDLIMSNPQMREVIDRNPELAHILNDPATLRQTLEA 1119
N ++MRDIMN PA+QN++NN DIVR+LIM+NPQM+E++DRNPELAHILNDP+TLRQTLEA
Sbjct: 173 NPNLMRDIMNTPAMQNLINNPDIVRNLIMNNPQMQELMDRNPELAHILNDPSTLRQTLEA 232
Query: 1118 SRNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEPLMNATTMA 972
+RNPE+MREMMRNTDRAMSNIE+SPEGFNMLRRMYE VQEP +NATTMA
Sbjct: 233 TRNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMA 281
Score = 180 bits (456), Expect(2) = 1e-92
Identities = 110/233 (47%), Positives = 130/233 (55%), Gaps = 19/233 (8%)
Frame = -3
Query: 849 PNTNPLPNPWSNAGAAGVTQRNIARSTRA---XXXXXXXXXXXXXLPNMD---------- 709
PNTNPLPNPWS+ G G Q N RST LP+++
Sbjct: 310 PNTNPLPNPWSSTGTGGGGQTNTRRSTTTGGDARQPAPTGLGGLGLPDLEGMMGGMPDTA 369
Query: 708 ---QFVPTPAVAQRIQSLLSNPQAMNRVLG--PQMQNMLDSNHQLREMMQNPNFVSRLTS 544
Q + PA++Q +QS+LSNPQ MN++LG + + M D N LRE+MQNP F+ +S
Sbjct: 370 MLTQLMQNPAISQMMQSILSNPQTMNQILGVNNEQRGMPDLN-SLREVMQNPEFLRLFSS 428
Query: 543 PET-XXXXXXXXXXXXXXXXXXXXXXXXXXXTGEGGLNNMGLDFWMNMLGFLGAAGVNVP 367
PET G G LNNMGL+ +M G LGA + VP
Sbjct: 429 PETLQQLLSFQQTLLSQLGQQQSAQEPGQTGGGTGPLNNMGLEMLSSMFGGLGAGSLAVP 488
Query: 366 NTPNVPAEQLYANQLSQLQEMGFFDTQENIRALSVTAGNVHAAVERLLGNPGQ 208
N N P EQLYA QLSQLQEMGFFDTQENIRAL T+GNVHAAVERLLGNPGQ
Sbjct: 489 NRSNEPPEQLYATQLSQLQEMGFFDTQENIRALIATSGNVHAAVERLLGNPGQ 541
Score = 88.2 bits (217), Expect = 6e-15
Identities = 42/79 (53%), Positives = 57/79 (72%)
Frame = -3
Query: 1653 TMSGDVSSSEKVNLNVVHVSKFSVEISLDSSVLEFKNVLAQNLNIPAQQQRLIYKGRVLK 1474
T + ++ +N+ + SKFSV+I LDS+V FK +A N +I + QQRLIYKGR+LK
Sbjct: 12 TTERNAANEVNINIRCSNGSKFSVQIGLDSTVRSFKEAVAHNCDISSDQQRLIYKGRILK 71
Query: 1473 DDRTLNSYGLQADHSVHLV 1417
DD+ L SYGL+ADH+VHLV
Sbjct: 72 DDQPLQSYGLEADHTVHLV 90
>ref|XP_003612325.1| Ubiquilin [Medicago truncatula] gi|355513660|gb|AES95283.1| Ubiquilin
[Medicago truncatula]
Length = 542
Score = 184 bits (468), Expect(2) = 2e-87
Identities = 86/109 (78%), Positives = 104/109 (95%)
Frame = -1
Query: 1298 NSDMMRDIMNMPAIQNMMNNGDIVRDLIMSNPQMREVIDRNPELAHILNDPATLRQTLEA 1119
N +++R+IMN PA+QN++NN +IVR+L+MSNPQM+E++DRNPELAHILNDP+TLRQTLEA
Sbjct: 170 NPNLVREIMNSPAMQNLLNNPEIVRNLLMSNPQMQELMDRNPELAHILNDPSTLRQTLEA 229
Query: 1118 SRNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEPLMNATTMA 972
+RNPE+MREMMRNTDRAMSNIE+SPEGFNMLRRMYE VQEP +NATTMA
Sbjct: 230 TRNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMA 278
Score = 166 bits (420), Expect(2) = 2e-87
Identities = 101/233 (43%), Positives = 124/233 (53%), Gaps = 19/233 (8%)
Frame = -3
Query: 849 PNTNPLPNPWSNAGAAGVTQRNIARSTRAXXXXXXXXXXXXXLPNMD------------- 709
PNTNPLPNPWS+A G Q N+ RST M
Sbjct: 312 PNTNPLPNPWSSAPTGGA-QTNVRRSTPTAADARQQTPTGLGGLGMPDLEGMLGGMPDAG 370
Query: 708 ---QFVPTPAVAQRIQSLLSNPQAMNRVLG--PQMQNMLDSNHQLREMMQNPNFVSRLTS 544
Q + PA++Q +QS++SNPQ MN++LG + M D N +RE+MQNP F+ +S
Sbjct: 371 SLTQLMQNPAISQMMQSIMSNPQTMNQILGMNTDQRGMPDMN-SMREVMQNPEFLRMFSS 429
Query: 543 PET-XXXXXXXXXXXXXXXXXXXXXXXXXXXTGEGGLNNMGLDFWMNMLGFLGAAGVNVP 367
PET G G +NN+GL+ +M G LGA + VP
Sbjct: 430 PETMQQLLSMQQALMTQLGQQQSTQEPGQTGGGTGPVNNLGLEMLSSMFGGLGAGSLAVP 489
Query: 366 NTPNVPAEQLYANQLSQLQEMGFFDTQENIRALSVTAGNVHAAVERLLGNPGQ 208
N N P E LYA QL+QLQEMGFFDTQEN+RAL T+GNVHAAVERLLGN GQ
Sbjct: 490 NRSNEPPETLYATQLTQLQEMGFFDTQENLRALIATSGNVHAAVERLLGNSGQ 542
Score = 99.4 bits (246), Expect = 3e-18
Identities = 47/69 (68%), Positives = 60/69 (86%)
Frame = -3
Query: 1623 KVNLNVVHVSKFSVEISLDSSVLEFKNVLAQNLNIPAQQQRLIYKGRVLKDDRTLNSYGL 1444
K+N+ + SKFSV+ISLDS+V+ FK+V+AQN +I A QQRLIYKGR+LKDD+TL SYGL
Sbjct: 21 KINIRCSNGSKFSVQISLDSTVVSFKDVIAQNCDISADQQRLIYKGRILKDDQTLQSYGL 80
Query: 1443 QADHSVHLV 1417
+ADH+VHLV
Sbjct: 81 EADHTVHLV 89
>ref|XP_003519686.1| PREDICTED: ubiquilin-1-like [Glycine max]
Length = 545
Score = 182 bits (461), Expect(2) = 6e-87
Identities = 84/109 (77%), Positives = 103/109 (94%)
Frame = -1
Query: 1298 NSDMMRDIMNMPAIQNMMNNGDIVRDLIMSNPQMREVIDRNPELAHILNDPATLRQTLEA 1119
N +++R+IMN P +QN++NN +IVR+LIM+NPQM+E++DRNPELAHILNDP+TLRQTLEA
Sbjct: 166 NPNLVREIMNSPTMQNLINNPEIVRNLIMNNPQMQELMDRNPELAHILNDPSTLRQTLEA 225
Query: 1118 SRNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEPLMNATTMA 972
+RNPE+MREMMRNTDRAMSNIE+SPEGFNMLRRMYE +QEP +NATTMA
Sbjct: 226 TRNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENIQEPFLNATTMA 274
Score = 167 bits (423), Expect(2) = 6e-87
Identities = 104/235 (44%), Positives = 129/235 (54%), Gaps = 21/235 (8%)
Frame = -3
Query: 849 PNTNPLPNPWSNAGAAGVTQRNIARSTRA---XXXXXXXXXXXXXLPNMD---------- 709
PNTNPLPNPWS+ G G Q N RS LP+++
Sbjct: 313 PNTNPLPNPWSSTGTGG-AQNNSRRSLTTGVDARQQGPTGLGGHGLPDLESMLGGSAMPD 371
Query: 708 -----QFVPTPAVAQRIQSLLSNPQAMNRVLG--PQMQNMLDSNHQLREMMQNPNFVSRL 550
Q + PA++Q +QS+LSNPQ +N++LG + + M D N LRE+MQNP F+
Sbjct: 372 PALLTQLMQNPAISQMMQSMLSNPQTLNQILGANTEQRGMPDLN-SLREVMQNPEFLRLF 430
Query: 549 TSPET-XXXXXXXXXXXXXXXXXXXXXXXXXXXTGEGGLNNMGLDFWMNMLGFLGAAGVN 373
+SPET G G +NN+GL+ +M G LGA +
Sbjct: 431 SSPETLQQLLSFQQTLMSQLGQQQSTWESGQTGGGTGPMNNLGLEMLSSMFGGLGAGSLA 490
Query: 372 VPNTPNVPAEQLYANQLSQLQEMGFFDTQENIRALSVTAGNVHAAVERLLGNPGQ 208
VPN N P EQLYA+QLSQLQEMGFFD+QENIRAL T+GNVHAAVERLLGN GQ
Sbjct: 491 VPNRSNEPPEQLYASQLSQLQEMGFFDSQENIRALIATSGNVHAAVERLLGNSGQ 545
Score = 94.0 bits (232), Expect = 1e-16
Identities = 50/84 (59%), Positives = 65/84 (77%), Gaps = 6/84 (7%)
Frame = -3
Query: 1650 MSGD--VSSSEKVNLNV----VHVSKFSVEISLDSSVLEFKNVLAQNLNIPAQQQRLIYK 1489
M GD V SE VN+N+ + SKFSV+I++DS+V FK+ A + +IPA+QQRLIYK
Sbjct: 1 MGGDSAVEESEGVNVNINVRCSNGSKFSVQIAVDSTVSSFKDAAACSCDIPAEQQRLIYK 60
Query: 1488 GRVLKDDRTLNSYGLQADHSVHLV 1417
GR+LKDD+TL SYGL+ADH+VHLV
Sbjct: 61 GRILKDDQTLRSYGLEADHTVHLV 84
>ref|XP_003629155.1| Ubiquilin-1 [Medicago truncatula] gi|355523177|gb|AET03631.1|
Ubiquilin-1 [Medicago truncatula]
Length = 539
Score = 182 bits (461), Expect(2) = 5e-84
Identities = 84/109 (77%), Positives = 104/109 (95%)
Frame = -1
Query: 1298 NSDMMRDIMNMPAIQNMMNNGDIVRDLIMSNPQMREVIDRNPELAHILNDPATLRQTLEA 1119
N ++MR++MN PA+QN+++N +IVR+LIM+NPQM+E++DRNPELAH+LNDP+TLRQTLEA
Sbjct: 163 NPNLMREMMNSPAMQNLVSNPEIVRNLIMNNPQMQELMDRNPELAHVLNDPSTLRQTLEA 222
Query: 1118 SRNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEPLMNATTMA 972
+RNPE+MREMMRNTDRAMSNIE+SPEGFNMLRRMYE VQEP +NATTMA
Sbjct: 223 TRNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMA 271
Score = 157 bits (398), Expect(2) = 5e-84
Identities = 103/237 (43%), Positives = 123/237 (51%), Gaps = 23/237 (9%)
Frame = -3
Query: 849 PNTNPLPNPWSNAGAAGVTQRNIARSTRA--XXXXXXXXXXXXXLPNMD----------- 709
PN NPLPNPWS+ G G Q N ST LP ++
Sbjct: 305 PNANPLPNPWSSTG-TGAPQNNTRSSTTGGDARQQAPTGLGGLGLPGLEGMLGGSGMPDP 363
Query: 708 ----QFVPTPAVAQRIQSLLSNPQAMNRVLG----PQMQNMLDSNHQLREMMQNPNFVSR 553
Q + PA++Q +QS+LSNPQ ++++LG Q M D N LR++MQNP F+
Sbjct: 364 ALLTQLMQNPAISQMMQSMLSNPQTLSQILGAANTEQRGGMPDLN-SLRDVMQNPEFLRL 422
Query: 552 LTSPET-XXXXXXXXXXXXXXXXXXXXXXXXXXXTGEGGLNNMGLDFWMNMLGFLGAAGV 376
SPET G G NNMGL+ +M G LGA G+
Sbjct: 423 FQSPETMQQLMSFQQALLSQQQSTRESGQTGQTGGGTGPFNNMGLEMLSSMFGGLGAGGL 482
Query: 375 N-VPNTPNVPAEQLYANQLSQLQEMGFFDTQENIRALSVTAGNVHAAVERLLGNPGQ 208
PN N P EQLYA QL+QLQEMGFFDTQENIRAL T+GNVHAAVERLLGN GQ
Sbjct: 483 GAAPNRSNEPPEQLYATQLTQLQEMGFFDTQENIRALIATSGNVHAAVERLLGNTGQ 539
Score = 96.3 bits (238), Expect = 2e-17
Identities = 47/74 (63%), Positives = 64/74 (86%), Gaps = 2/74 (2%)
Frame = -3
Query: 1632 SSEKVNLNV--VHVSKFSVEISLDSSVLEFKNVLAQNLNIPAQQQRLIYKGRVLKDDRTL 1459
S +VN+NV + +K+SV++SLDS+V FK+++A+N +IPAQQQRLIYKGR+LKDD+TL
Sbjct: 14 SKTEVNINVRCSNGTKYSVQVSLDSTVGSFKDLIARNCDIPAQQQRLIYKGRILKDDQTL 73
Query: 1458 NSYGLQADHSVHLV 1417
SYGL+ADH+VHLV
Sbjct: 74 QSYGLEADHAVHLV 87
>ref|XP_003612326.1| Ubiquilin [Medicago truncatula] gi|355513661|gb|AES95284.1| Ubiquilin
[Medicago truncatula]
Length = 503
Score = 184 bits (468), Expect(3) = 3e-61
Identities = 86/109 (78%), Positives = 104/109 (95%)
Frame = -1
Query: 1298 NSDMMRDIMNMPAIQNMMNNGDIVRDLIMSNPQMREVIDRNPELAHILNDPATLRQTLEA 1119
N +++R+IMN PA+QN++NN +IVR+L+MSNPQM+E++DRNPELAHILNDP+TLRQTLEA
Sbjct: 170 NPNLVREIMNSPAMQNLLNNPEIVRNLLMSNPQMQELMDRNPELAHILNDPSTLRQTLEA 229
Query: 1118 SRNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEPLMNATTMA 972
+RNPE+MREMMRNTDRAMSNIE+SPEGFNMLRRMYE VQEP +NATTMA
Sbjct: 230 TRNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMA 278
Score = 77.0 bits (188), Expect(3) = 3e-61
Identities = 54/169 (31%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Frame = -3
Query: 849 PNTNPLPNPWSNAGAAGVTQRNIARSTRAXXXXXXXXXXXXXLPNMD------------- 709
PNTNPLPNPWS+A G Q N+ RST M
Sbjct: 312 PNTNPLPNPWSSAPTGGA-QTNVRRSTPTAADARQQTPTGLGGLGMPDLEGMLGGMPDAG 370
Query: 708 ---QFVPTPAVAQRIQSLLSNPQAMNRVLG--PQMQNMLDSNHQLREMMQNPNFVSRLTS 544
Q + PA++Q +QS++SNPQ MN++LG + M D N +RE+MQNP F+ +S
Sbjct: 371 SLTQLMQNPAISQMMQSIMSNPQTMNQILGMNTDQRGMPDMN-SMREVMQNPEFLRMFSS 429
Query: 543 PET-XXXXXXXXXXXXXXXXXXXXXXXXXXXTGEGGLNNMGLDFWMNML 400
PET G G +NN+GL+ N +
Sbjct: 430 PETMQQLLSMQQALMTQLGQQQSTQEPGQTGGGTGPVNNLGLEMLSNQM 478
Score = 23.1 bits (48), Expect(3) = 3e-61
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 7/29 (24%)
Frame = -1
Query: 347 LNNFMQISCH-------SFKKWVSLTPKR 282
L+N M + H SFK+W SLT KR
Sbjct: 474 LSNQMSLQRHCMLPSLPSFKRWDSLTHKR 502
Score = 99.4 bits (246), Expect = 3e-18
Identities = 47/69 (68%), Positives = 60/69 (86%)
Frame = -3
Query: 1623 KVNLNVVHVSKFSVEISLDSSVLEFKNVLAQNLNIPAQQQRLIYKGRVLKDDRTLNSYGL 1444
K+N+ + SKFSV+ISLDS+V+ FK+V+AQN +I A QQRLIYKGR+LKDD+TL SYGL
Sbjct: 21 KINIRCSNGSKFSVQISLDSTVVSFKDVIAQNCDISADQQRLIYKGRILKDDQTLQSYGL 80
Query: 1443 QADHSVHLV 1417
+ADH+VHLV
Sbjct: 81 EADHTVHLV 89