BLASTX nr result

ID: Coptis21_contig00000970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000970
         (1411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS46232.1| methionine sulfoxide reductase A [Populus trichoc...   322   2e-85
ref|XP_002322323.1| methionine sulfoxide reductase type [Populus...   320   4e-85
gb|AEN03272.1| methionine sulfoxide reductase A4 [Solanum lycope...   319   1e-84
pdb|2J89|A Chain A, Functional And Structural Aspects Of Poplar ...   318   3e-84
ref|XP_002332320.1| methionine sulfoxide reductase type [Populus...   316   8e-84

>gb|AAS46232.1| methionine sulfoxide reductase A [Populus trichocarpa x Populus
            deltoides]
          Length = 261

 Score =  322 bits (824), Expect = 2e-85
 Identities = 149/186 (80%), Positives = 162/186 (87%)
 Frame = -2

Query: 1275 TMASPIAQGPDSDTPLPGQNFAQFGAGCFWSVELAYQRVPGVTKTEVGYTQGILDSPTYH 1096
            TM   I QGPD D P PGQ FAQFGAGCFW VELA+QRVPGVTKTEVGYTQG+L +PTY 
Sbjct: 76   TMDPTIPQGPDDDLPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYE 135

Query: 1095 DVCSGSTKHAEVVRVQYDPKECSFDTLLDVFWGKHDPTTLNRQGGDVGTQYRSGIYFYTA 916
            DVC+G+T H EVVRVQYDPKECSFDTL+DV W +HDPTTLNRQG DVGTQYRSGIY+YT 
Sbjct: 136  DVCTGTTNHNEVVRVQYDPKECSFDTLIDVLWARHDPTTLNRQGNDVGTQYRSGIYYYTP 195

Query: 915  EQEQKAKESLEKQQKILNRNIVTEILPAKKYYIAEEYHQQYLAKGGRAGSKQSSEKGCTD 736
            EQE+ AKESLE+QQK+LNR IVTEILPAKK+Y AEEYHQQYLAKGGR G  QS+EKGC D
Sbjct: 196  EQEKAAKESLERQQKLLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFMQSAEKGCND 255

Query: 735  PIRCYG 718
            PIRCYG
Sbjct: 256  PIRCYG 261


>ref|XP_002322323.1| methionine sulfoxide reductase type [Populus trichocarpa]
            gi|222869319|gb|EEF06450.1| methionine sulfoxide
            reductase type [Populus trichocarpa]
          Length = 203

 Score =  320 bits (821), Expect = 4e-85
 Identities = 149/186 (80%), Positives = 161/186 (86%)
 Frame = -2

Query: 1275 TMASPIAQGPDSDTPLPGQNFAQFGAGCFWSVELAYQRVPGVTKTEVGYTQGILDSPTYH 1096
            TM   I QGPD D P PGQ FAQFGAGCFW VELA+QRVPGVTKTEVGYTQG+L +PTY 
Sbjct: 18   TMDPTIPQGPDDDLPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYE 77

Query: 1095 DVCSGSTKHAEVVRVQYDPKECSFDTLLDVFWGKHDPTTLNRQGGDVGTQYRSGIYFYTA 916
            DVCSG+T H EVVRVQYDPKECSFDTLLDV W +HDPT LNRQG DVGTQYRSGIY+YT 
Sbjct: 78   DVCSGTTNHNEVVRVQYDPKECSFDTLLDVLWARHDPTALNRQGNDVGTQYRSGIYYYTP 137

Query: 915  EQEQKAKESLEKQQKILNRNIVTEILPAKKYYIAEEYHQQYLAKGGRAGSKQSSEKGCTD 736
            EQE+ AKESLE+QQK+LNR IVTEILPAKK+Y AEEYHQQYLAKGGR G  QS+EKGC D
Sbjct: 138  EQEKAAKESLERQQKLLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFMQSAEKGCND 197

Query: 735  PIRCYG 718
            PI+CYG
Sbjct: 198  PIKCYG 203


>gb|AEN03272.1| methionine sulfoxide reductase A4 [Solanum lycopersicum]
          Length = 257

 Score =  319 bits (817), Expect = 1e-84
 Identities = 147/184 (79%), Positives = 163/184 (88%)
 Frame = -2

Query: 1269 ASPIAQGPDSDTPLPGQNFAQFGAGCFWSVELAYQRVPGVTKTEVGYTQGILDSPTYHDV 1090
            +S I QGPD+D P PGQ F QFGAGCFW VELA+QRVPGVTKTEVGY+QG LD+PTY D+
Sbjct: 74   SSAIPQGPDTDIPAPGQQFVQFGAGCFWGVELAFQRVPGVTKTEVGYSQGYLDNPTYEDI 133

Query: 1089 CSGSTKHAEVVRVQYDPKECSFDTLLDVFWGKHDPTTLNRQGGDVGTQYRSGIYFYTAEQ 910
            CSG+T H+EVVRVQYDPKEC+FDTLLDVFW +HDPTTLNRQG DVGTQYRSGIYFYT EQ
Sbjct: 134  CSGNTFHSEVVRVQYDPKECNFDTLLDVFWDRHDPTTLNRQGNDVGTQYRSGIYFYTPEQ 193

Query: 909  EQKAKESLEKQQKILNRNIVTEILPAKKYYIAEEYHQQYLAKGGRAGSKQSSEKGCTDPI 730
            E+ A E+ ++QQKILNRNIVTEILPAKK+Y AEEYHQQYLAKGGR G +QS EKGC DPI
Sbjct: 194  EKAALEARDRQQKILNRNIVTEILPAKKFYRAEEYHQQYLAKGGRFGFRQSVEKGCNDPI 253

Query: 729  RCYG 718
            RCYG
Sbjct: 254  RCYG 257


>pdb|2J89|A Chain A, Functional And Structural Aspects Of Poplar Cytosolic And
            Plastidial Type A Methionine Sulfoxide Reductases
          Length = 261

 Score =  318 bits (814), Expect = 3e-84
 Identities = 148/186 (79%), Positives = 161/186 (86%)
 Frame = -2

Query: 1275 TMASPIAQGPDSDTPLPGQNFAQFGAGCFWSVELAYQRVPGVTKTEVGYTQGILDSPTYH 1096
            TM   I QGPD D P PGQ FAQFGAGCFW VELA+QRVPGVTKTEVGYTQG+L +PTY 
Sbjct: 76   TMDPTIPQGPDDDLPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYE 135

Query: 1095 DVCSGSTKHAEVVRVQYDPKECSFDTLLDVFWGKHDPTTLNRQGGDVGTQYRSGIYFYTA 916
            DV +G+T H EVVRVQYDPKECSFDTL+DV W +HDPTTLNRQG DVGTQYRSGIY+YT 
Sbjct: 136  DVXTGTTNHNEVVRVQYDPKECSFDTLIDVLWARHDPTTLNRQGNDVGTQYRSGIYYYTP 195

Query: 915  EQEQKAKESLEKQQKILNRNIVTEILPAKKYYIAEEYHQQYLAKGGRAGSKQSSEKGCTD 736
            EQE+ AKESLE+QQK+LNR IVTEILPAKK+Y AEEYHQQYLAKGGR G  QS+EKGC D
Sbjct: 196  EQEKAAKESLERQQKLLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFMQSAEKGCND 255

Query: 735  PIRCYG 718
            PIRCYG
Sbjct: 256  PIRCYG 261


>ref|XP_002332320.1| methionine sulfoxide reductase type [Populus trichocarpa]
            gi|222832567|gb|EEE71044.1| methionine sulfoxide
            reductase type [Populus trichocarpa]
          Length = 203

 Score =  316 bits (810), Expect = 8e-84
 Identities = 147/186 (79%), Positives = 162/186 (87%)
 Frame = -2

Query: 1275 TMASPIAQGPDSDTPLPGQNFAQFGAGCFWSVELAYQRVPGVTKTEVGYTQGILDSPTYH 1096
            TM   I QGPD D P PGQ FAQFGAGCFW VELA+QRVPGVTKTEVGYTQG+  +P+Y 
Sbjct: 18   TMDPTIPQGPDDDLPAPGQQFAQFGAGCFWGVELAFQRVPGVTKTEVGYTQGLSHNPSYE 77

Query: 1095 DVCSGSTKHAEVVRVQYDPKECSFDTLLDVFWGKHDPTTLNRQGGDVGTQYRSGIYFYTA 916
            DVC+G+TKH+EVVRVQYDPKE SF+TLLD FW +HDPTTLNRQG DVGTQYRSGIY+YT 
Sbjct: 78   DVCTGTTKHSEVVRVQYDPKEGSFETLLDAFWARHDPTTLNRQGNDVGTQYRSGIYYYTP 137

Query: 915  EQEQKAKESLEKQQKILNRNIVTEILPAKKYYIAEEYHQQYLAKGGRAGSKQSSEKGCTD 736
            EQE+ AKES+E+QQK+ NR IVTEILPAKK+Y AEEYHQQYLAKGGR G KQSSEKGC D
Sbjct: 138  EQEKAAKESMEQQQKLSNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQSSEKGCND 197

Query: 735  PIRCYG 718
            PIRCYG
Sbjct: 198  PIRCYG 203


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