BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000966
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518343.1| methylmalonate-semialdehyde dehydrogenase, p...   513   e-143
ref|XP_002266390.1| PREDICTED: methylmalonate-semialdehyde dehyd...   513   e-143
ref|XP_002313217.1| predicted protein [Populus trichocarpa] gi|2...   511   e-142
gb|ABK95002.1| unknown [Populus trichocarpa]                          511   e-142
ref|XP_002300008.1| predicted protein [Populus trichocarpa] gi|2...   507   e-141

>ref|XP_002518343.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus
            communis] gi|223542563|gb|EEF44103.1|
            methylmalonate-semialdehyde dehydrogenase, putative
            [Ricinus communis]
          Length = 541

 Score =  513 bits (1322), Expect = e-143
 Identities = 256/301 (85%), Positives = 278/301 (92%), Gaps = 1/301 (0%)
 Frame = -2

Query: 1238 VLNIVHGFKEIVNNICDDKDIRAISFVGSNTAGMHIYSRAAAKGKRVQANMGAKNHGIIV 1059
            VLNIVHG  +IVN ICDD DIRAISFVGSNTAGMHIY RA+AKGKRVQ+NMGAKNHGI++
Sbjct: 240  VLNIVHGTNDIVNAICDDDDIRAISFVGSNTAGMHIYGRASAKGKRVQSNMGAKNHGIVL 299

Query: 1058 PDANIDATLNALVAAGFGAAGQRCMALSTVVFVGDSKPWVDGLIEHAKALKVNAGCEPGA 879
            PDAN+DATLNALVAAGFGAAGQRCMALSTVVFVGDS+ W + L+E AKALKVNAG EP A
Sbjct: 300  PDANMDATLNALVAAGFGAAGQRCMALSTVVFVGDSQSWENKLVERAKALKVNAGTEPDA 359

Query: 878  DLGPVISKQAKDRICRLVQSGVESGASLDLDGRNIVVPGYEDGNFVGPTILSNVTSDMDC 699
            DLGPVISKQAK+R+ RL+QSGVESGA L LDGRNIVVPGYE GNF+GPTILS VT+DM+C
Sbjct: 360  DLGPVISKQAKERVHRLIQSGVESGAKLLLDGRNIVVPGYELGNFIGPTILSGVTADMEC 419

Query: 698  YKEEIFGPVLLCMQADSLEEAIDIVNKNEYGNGASIFTSSGVAARKFQNEIEAGQVGINV 519
            YKEEIFGPVLLCMQADS EEAI+IVN+N+YGNGA+IFT+SG AARKFQ EIEAGQVGINV
Sbjct: 420  YKEEIFGPVLLCMQADSFEEAINIVNRNKYGNGAAIFTTSGAAARKFQTEIEAGQVGINV 479

Query: 518  PIPVPLPFFSFTGSKASFAGDLNFYGKAGVQFFTQIKTVTQQWKDLPV-QGVSLAMPTSQ 342
            PIPVPLPFFSFTGSKASFAGDLNFYGKAGV F+TQIKT+TQQWKDLP   GVSLAMPTSQ
Sbjct: 480  PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTITQQWKDLPSGSGVSLAMPTSQ 539

Query: 341  K 339
            K
Sbjct: 540  K 540


>ref|XP_002266390.1| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating],
            mitochondrial [Vitis vinifera]
            gi|296085606|emb|CBI29381.3| unnamed protein product
            [Vitis vinifera]
          Length = 539

 Score =  513 bits (1320), Expect = e-143
 Identities = 254/302 (84%), Positives = 282/302 (93%), Gaps = 1/302 (0%)
 Frame = -2

Query: 1238 VLNIVHGFKEIVNNICDDKDIRAISFVGSNTAGMHIYSRAAAKGKRVQANMGAKNHGIIV 1059
            VLNIVHG + IVN ICDD+DIRA+SFVGSNTAGMHIYSRA+AKGKRVQ+NMGAKNH I++
Sbjct: 237  VLNIVHGTRNIVNAICDDEDIRAVSFVGSNTAGMHIYSRASAKGKRVQSNMGAKNHAIVL 296

Query: 1058 PDANIDATLNALVAAGFGAAGQRCMALSTVVFVGDSKPWVDGLIEHAKALKVNAGCEPGA 879
            PDA++DATLNALVAAGFGAAGQRCMALSTVVFVGDSK W D L+E AKALKVN+G EP A
Sbjct: 297  PDASLDATLNALVAAGFGAAGQRCMALSTVVFVGDSKSWEDKLLERAKALKVNSGTEPDA 356

Query: 878  DLGPVISKQAKDRICRLVQSGVESGASLDLDGRNIVVPGYEDGNFVGPTILSNVTSDMDC 699
            DLGPVISK+AK+RIC+L+Q+GV+SGA L LDGRNIVVPGYE GNF+GPTILS+VT+DM+C
Sbjct: 357  DLGPVISKEAKERICKLIQNGVDSGARLVLDGRNIVVPGYEHGNFIGPTILSDVTADMEC 416

Query: 698  YKEEIFGPVLLCMQADSLEEAIDIVNKNEYGNGASIFTSSGVAARKFQNEIEAGQVGINV 519
            YKEEIFGPVLLC+QADSL+EAI+IVN+N+YGNGASIFTSSGV ARKFQ EIEAGQVGINV
Sbjct: 417  YKEEIFGPVLLCIQADSLDEAINIVNRNKYGNGASIFTSSGVDARKFQTEIEAGQVGINV 476

Query: 518  PIPVPLPFFSFTGSKASFAGDLNFYGKAGVQFFTQIKTVTQQWKDLPV-QGVSLAMPTSQ 342
            PIPVPLPFFSFTGSKASFAGDLNFYGKAGVQF+TQIKTVTQQWK L    GVSLAMPTSQ
Sbjct: 477  PIPVPLPFFSFTGSKASFAGDLNFYGKAGVQFYTQIKTVTQQWKGLASGSGVSLAMPTSQ 536

Query: 341  KT 336
            K+
Sbjct: 537  KS 538


>ref|XP_002313217.1| predicted protein [Populus trichocarpa] gi|222849625|gb|EEE87172.1|
            predicted protein [Populus trichocarpa]
          Length = 496

 Score =  511 bits (1315), Expect = e-142
 Identities = 253/301 (84%), Positives = 276/301 (91%), Gaps = 1/301 (0%)
 Frame = -2

Query: 1238 VLNIVHGFKEIVNNICDDKDIRAISFVGSNTAGMHIYSRAAAKGKRVQANMGAKNHGIIV 1059
            VLNIVHG  +IVN ICDD DIRAISFVGSNTAGMHIYSRA+AKGKRVQ+NMGAKNH I++
Sbjct: 196  VLNIVHGTNDIVNAICDDDDIRAISFVGSNTAGMHIYSRASAKGKRVQSNMGAKNHAIVL 255

Query: 1058 PDANIDATLNALVAAGFGAAGQRCMALSTVVFVGDSKPWVDGLIEHAKALKVNAGCEPGA 879
            PDAN DATLNALVAAGFGAAGQRCMALSTVVFVGDS+ W + L+E AK+LKVNAG EP A
Sbjct: 256  PDANTDATLNALVAAGFGAAGQRCMALSTVVFVGDSQSWENKLVECAKSLKVNAGTEPDA 315

Query: 878  DLGPVISKQAKDRICRLVQSGVESGASLDLDGRNIVVPGYEDGNFVGPTILSNVTSDMDC 699
            DLGPVISKQAK+R+C+L++SGVESGA L LDGRNIVVPGYEDGNF+GPTILS VT+DMDC
Sbjct: 316  DLGPVISKQAKERVCKLIESGVESGARLLLDGRNIVVPGYEDGNFIGPTILSGVTADMDC 375

Query: 698  YKEEIFGPVLLCMQADSLEEAIDIVNKNEYGNGASIFTSSGVAARKFQNEIEAGQVGINV 519
            YKEEIFGPVLLC +ADS EEAI  VN+N+YGNGA+IFT+SG AARKFQ EIEAGQVGINV
Sbjct: 376  YKEEIFGPVLLCKEADSFEEAIHFVNRNKYGNGAAIFTTSGAAARKFQTEIEAGQVGINV 435

Query: 518  PIPVPLPFFSFTGSKASFAGDLNFYGKAGVQFFTQIKTVTQQWKDLP-VQGVSLAMPTSQ 342
            PIPVPLPFFSFTGSKASFAGDLNFYGKAGV F+TQIKT+TQQWKDLP   GVSLAMPTSQ
Sbjct: 436  PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTITQQWKDLPGGSGVSLAMPTSQ 495

Query: 341  K 339
            K
Sbjct: 496  K 496


>gb|ABK95002.1| unknown [Populus trichocarpa]
          Length = 542

 Score =  511 bits (1315), Expect = e-142
 Identities = 253/301 (84%), Positives = 276/301 (91%), Gaps = 1/301 (0%)
 Frame = -2

Query: 1238 VLNIVHGFKEIVNNICDDKDIRAISFVGSNTAGMHIYSRAAAKGKRVQANMGAKNHGIIV 1059
            VLNIVHG  +IVN ICDD DIRAISFVGSNTAGMHIYSRA+AKGKRVQ+NMGAKNH I++
Sbjct: 241  VLNIVHGTNDIVNAICDDDDIRAISFVGSNTAGMHIYSRASAKGKRVQSNMGAKNHAIVL 300

Query: 1058 PDANIDATLNALVAAGFGAAGQRCMALSTVVFVGDSKPWVDGLIEHAKALKVNAGCEPGA 879
            PDAN DATLNALVAAGFGAAGQRCMALSTVVFVGDS+ W + L+E AK+LKVNAG EP A
Sbjct: 301  PDANTDATLNALVAAGFGAAGQRCMALSTVVFVGDSQSWENKLVECAKSLKVNAGTEPDA 360

Query: 878  DLGPVISKQAKDRICRLVQSGVESGASLDLDGRNIVVPGYEDGNFVGPTILSNVTSDMDC 699
            DLGPVISKQAK+R+C+L++SGVESGA L LDGRNIVVPGYEDGNF+GPTILS VT+DMDC
Sbjct: 361  DLGPVISKQAKERVCKLIESGVESGARLLLDGRNIVVPGYEDGNFIGPTILSGVTADMDC 420

Query: 698  YKEEIFGPVLLCMQADSLEEAIDIVNKNEYGNGASIFTSSGVAARKFQNEIEAGQVGINV 519
            YKEEIFGPVLLC +ADS EEAI  VN+N+YGNGA+IFT+SG AARKFQ EIEAGQVGINV
Sbjct: 421  YKEEIFGPVLLCKEADSFEEAIHFVNRNKYGNGAAIFTTSGAAARKFQTEIEAGQVGINV 480

Query: 518  PIPVPLPFFSFTGSKASFAGDLNFYGKAGVQFFTQIKTVTQQWKDLP-VQGVSLAMPTSQ 342
            PIPVPLPFFSFTGSKASFAGDLNFYGKAGV F+TQIKT+TQQWKDLP   GVSLAMPTSQ
Sbjct: 481  PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTITQQWKDLPGGSGVSLAMPTSQ 540

Query: 341  K 339
            K
Sbjct: 541  K 541


>ref|XP_002300008.1| predicted protein [Populus trichocarpa] gi|222847266|gb|EEE84813.1|
            predicted protein [Populus trichocarpa]
          Length = 497

 Score =  507 bits (1306), Expect = e-141
 Identities = 249/301 (82%), Positives = 277/301 (92%), Gaps = 1/301 (0%)
 Frame = -2

Query: 1238 VLNIVHGFKEIVNNICDDKDIRAISFVGSNTAGMHIYSRAAAKGKRVQANMGAKNHGIIV 1059
            VLNIVHG  ++VN ICDD DIRAISFVGSNTAGMHIYSRA+AKGKRVQ+NMGAKNH I++
Sbjct: 196  VLNIVHGTNDVVNAICDDDDIRAISFVGSNTAGMHIYSRASAKGKRVQSNMGAKNHAIVL 255

Query: 1058 PDANIDATLNALVAAGFGAAGQRCMALSTVVFVGDSKPWVDGLIEHAKALKVNAGCEPGA 879
            PDAN+DATLNALVAAGFGAAGQRCMALSTVVFVGD + W + L+E AK+LKVN+G EP A
Sbjct: 256  PDANVDATLNALVAAGFGAAGQRCMALSTVVFVGDPQSWENKLVERAKSLKVNSGMEPDA 315

Query: 878  DLGPVISKQAKDRICRLVQSGVESGASLDLDGRNIVVPGYEDGNFVGPTILSNVTSDMDC 699
            DLGPVISKQAK+R+CRL+QSGVESGA L LDGRNIVVPG+E GNF+GPTILS VT+DM+C
Sbjct: 316  DLGPVISKQAKERVCRLIQSGVESGARLLLDGRNIVVPGFEHGNFIGPTILSGVTADMEC 375

Query: 698  YKEEIFGPVLLCMQADSLEEAIDIVNKNEYGNGASIFTSSGVAARKFQNEIEAGQVGINV 519
            YKEEIFGPVLLCM+A S EEAI+I+N+N+YGNGA+IFT+SG AARKFQ EIEAGQVGINV
Sbjct: 376  YKEEIFGPVLLCMEAGSFEEAINILNRNKYGNGAAIFTASGAAARKFQTEIEAGQVGINV 435

Query: 518  PIPVPLPFFSFTGSKASFAGDLNFYGKAGVQFFTQIKTVTQQWKDLP-VQGVSLAMPTSQ 342
            PIPVPLPFFSFTGSKASFAGDLNFYGKAGV F+TQIKT+TQQWKDLP   GVSLAMPTSQ
Sbjct: 436  PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTITQQWKDLPGGSGVSLAMPTSQ 495

Query: 341  K 339
            K
Sbjct: 496  K 496