BLASTX nr result

ID: Coptis21_contig00000960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000960
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275967.1| PREDICTED: uncharacterized protein LOC100258...    69   3e-10
ref|XP_002523315.1| conserved hypothetical protein [Ricinus comm...    64   2e-08
ref|XP_004171239.1| PREDICTED: uncharacterized protein LOC101231...    62   7e-08
ref|XP_004145950.1| PREDICTED: uncharacterized protein LOC101207...    62   7e-08
ref|XP_002454814.1| hypothetical protein SORBIDRAFT_04g037960 [S...    62   7e-08

>ref|XP_002275967.1| PREDICTED: uncharacterized protein LOC100258972 [Vitis vinifera]
          Length = 75

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/78 (56%), Positives = 46/78 (58%), Gaps = 8/78 (10%)
 Frame = +2

Query: 44  MENSSLTTY------ANWLGTSVASAFFASLERCSCINLSTT--XXXXXXXXXAKDRPLM 199
           MENSS  +Y      A W+GTSVASAFFASLERCSCINLST            AKDRPLM
Sbjct: 1   MENSSFLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTADMDDDNDDGEEAKDRPLM 60

Query: 200 LTKPIQHHDNHDVDKLPV 253
           LT         DV  LPV
Sbjct: 61  LT---NESPKSDVVNLPV 75


>ref|XP_002523315.1| conserved hypothetical protein [Ricinus communis]
           gi|223537403|gb|EEF39031.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 88

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/59 (59%), Positives = 41/59 (69%)
 Frame = +2

Query: 59  LTTYANWLGTSVASAFFASLERCSCINLSTTXXXXXXXXXAKDRPLMLTKPIQHHDNHD 235
           L   A+W+G++VASAFFASLERCSCINL+T          AKDRPLML+KP    DN D
Sbjct: 17  LDRVASWVGSNVASAFFASLERCSCINLNTA-DPEDDDEEAKDRPLMLSKPTV-RDNSD 73


>ref|XP_004171239.1| PREDICTED: uncharacterized protein LOC101231567 [Cucumis sativus]
          Length = 107

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 34/57 (59%), Positives = 37/57 (64%)
 Frame = +2

Query: 29  NQSIEMENSSLTTYANWLGTSVASAFFASLERCSCINLSTTXXXXXXXXXAKDRPLM 199
           NQS  +    L   A W+GTSVASAFFASLERCSCINLST+         A DRPLM
Sbjct: 31  NQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTS-DDHEDPEEAHDRPLM 86


>ref|XP_004145950.1| PREDICTED: uncharacterized protein LOC101207351 [Cucumis sativus]
          Length = 124

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 34/57 (59%), Positives = 37/57 (64%)
 Frame = +2

Query: 29  NQSIEMENSSLTTYANWLGTSVASAFFASLERCSCINLSTTXXXXXXXXXAKDRPLM 199
           NQS  +    L   A W+GTSVASAFFASLERCSCINLST+         A DRPLM
Sbjct: 41  NQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTS-DDHEDPEEAHDRPLM 96


>ref|XP_002454814.1| hypothetical protein SORBIDRAFT_04g037960 [Sorghum bicolor]
           gi|241934645|gb|EES07790.1| hypothetical protein
           SORBIDRAFT_04g037960 [Sorghum bicolor]
          Length = 86

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
 Frame = +2

Query: 59  LTTYANWLGTSVASAFFASLERCSCINLST--TXXXXXXXXXAKDRPLMLTKPIQHHD 226
           + ++A W+GTSV SAFFASLERCSCINLST            AKDRPL+L    +H D
Sbjct: 1   MESWATWVGTSVTSAFFASLERCSCINLSTDDDDDDDRDHDEAKDRPLILAAAPRHDD 58


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