BLASTX nr result

ID: Coptis21_contig00000927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000927
         (1140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271306.1| PREDICTED: ferredoxin-thioredoxin reductase,...   137   5e-30
ref|XP_003524574.1| PREDICTED: ferredoxin-thioredoxin reductase,...   132   2e-28
ref|NP_001235107.1| uncharacterized protein LOC100305930 [Glycin...   130   8e-28
ref|XP_002513160.1| lipoic acid synthetase, putative [Ricinus co...   128   2e-27
gb|AFK46976.1| unknown [Lotus japonicus]                              128   3e-27

>ref|XP_002271306.1| PREDICTED: ferredoxin-thioredoxin reductase, variable chain,
           chloroplastic [Vitis vinifera]
           gi|147820518|emb|CAN76575.1| hypothetical protein
           VITISV_024425 [Vitis vinifera]
          Length = 168

 Score =  137 bits (345), Expect = 5e-30
 Identities = 72/122 (59%), Positives = 85/122 (69%), Gaps = 10/122 (8%)
 Frame = -1

Query: 708 SSWICRGRRSIVSCEVALKADXXXXXXXXXXXS----------KIGARVRVKVPLKVYHV 559
           SS +   RR  +SCEVAL++D                      KIGARVRVKVPLKV+HV
Sbjct: 45  SSAVVHRRRRTISCEVALRSDSATSSSSAAFEQVQEDAAEEAGKIGARVRVKVPLKVFHV 104

Query: 558 PKVPELDLSGMEGELKQYVGFWKGKHISANLPFKVQFFAQVPDRDGPVKFFAHLKEDEFD 379
           P+VPE+DL+GMEG LKQYVG WKGK ISANLPFK+ F A +  R GPVKFFAHLK+DEF+
Sbjct: 105 PRVPEVDLTGMEGVLKQYVGVWKGKRISANLPFKIGFVADIEGR-GPVKFFAHLKDDEFE 163

Query: 378 YL 373
           Y+
Sbjct: 164 YV 165


>ref|XP_003524574.1| PREDICTED: ferredoxin-thioredoxin reductase, variable chain-like
           [Glycine max]
          Length = 145

 Score =  132 bits (331), Expect = 2e-28
 Identities = 68/107 (63%), Positives = 78/107 (72%)
 Frame = -1

Query: 693 RGRRSIVSCEVALKADXXXXXXXXXXXSKIGARVRVKVPLKVYHVPKVPELDLSGMEGEL 514
           +  R  + CEVA+ A            SKIGARV+VK  +KVYHVPKV ELDL+G+EGE+
Sbjct: 43  KSARGGIRCEVAINA---VDESTTSPESKIGARVKVKAGVKVYHVPKVAELDLTGLEGEI 99

Query: 513 KQYVGFWKGKHISANLPFKVQFFAQVPDRDGPVKFFAHLKEDEFDYL 373
           KQYVG W GK ISANLP+KVQF   +P R GPVKFFAHLKEDEFDYL
Sbjct: 100 KQYVGLWNGKRISANLPYKVQFLTDIPAR-GPVKFFAHLKEDEFDYL 145


>ref|NP_001235107.1| uncharacterized protein LOC100305930 [Glycine max]
           gi|255627015|gb|ACU13852.1| unknown [Glycine max]
          Length = 153

 Score =  130 bits (326), Expect = 8e-28
 Identities = 72/125 (57%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
 Frame = -1

Query: 744 TVVAKSQQHFTSSSWICRGRRSIVSCEVALKADXXXXXXXXXXXSKIGARVRVK-VPLKV 568
           T +A +   F+ +  I + +R  + CEVA+ A            +KIGARV+VK   LKV
Sbjct: 32  TAMAMAMAPFSLAMKI-KSKRGGIRCEVAINA-VDEESRTSPEETKIGARVKVKEAGLKV 89

Query: 567 YHVPKVPELDLSGMEGELKQYVGFWKGKHISANLPFKVQFFAQVPDRDGPVKFFAHLKED 388
           YHVPKV ELDL+G+EGE+KQYVG W GK ISANLP+KVQF   +P R GPVKFFAHLKED
Sbjct: 90  YHVPKVGELDLTGLEGEIKQYVGLWNGKRISANLPYKVQFLTDIPGR-GPVKFFAHLKED 148

Query: 387 EFDYL 373
           EFDYL
Sbjct: 149 EFDYL 153


>ref|XP_002513160.1| lipoic acid synthetase, putative [Ricinus communis]
           gi|223548171|gb|EEF49663.1| lipoic acid synthetase,
           putative [Ricinus communis]
          Length = 184

 Score =  128 bits (322), Expect = 2e-27
 Identities = 66/111 (59%), Positives = 76/111 (68%), Gaps = 7/111 (6%)
 Frame = -1

Query: 684 RSIVSCEVALKADXXXXXXXXXXXS-------KIGARVRVKVPLKVYHVPKVPELDLSGM 526
           R ++SCEVA                       KIGARV+VKVPLKVYHVP+VPE+DL+G 
Sbjct: 74  RRLISCEVASPTSSSSTTLAQGEGEEPAVGENKIGARVKVKVPLKVYHVPRVPEVDLTGK 133

Query: 525 EGELKQYVGFWKGKHISANLPFKVQFFAQVPDRDGPVKFFAHLKEDEFDYL 373
           EG LKQYV  WKGK ISANLP+KV+F   +  R GPVKFFAHLKEDEFD+L
Sbjct: 134 EGHLKQYVALWKGKRISANLPYKVEFLVDIEGR-GPVKFFAHLKEDEFDFL 183


>gb|AFK46976.1| unknown [Lotus japonicus]
          Length = 166

 Score =  128 bits (321), Expect = 3e-27
 Identities = 67/109 (61%), Positives = 77/109 (70%), Gaps = 5/109 (4%)
 Frame = -1

Query: 684 RSIVSCEVALK-----ADXXXXXXXXXXXSKIGARVRVKVPLKVYHVPKVPELDLSGMEG 520
           RSI  CEVA++     +            SK+GARVRVKVPLKVYHVPKVPE DL G EG
Sbjct: 59  RSITRCEVAVEESSPSSTSSSSESEEAESSKVGARVRVKVPLKVYHVPKVPEFDLEGAEG 118

Query: 519 ELKQYVGFWKGKHISANLPFKVQFFAQVPDRDGPVKFFAHLKEDEFDYL 373
           E+KQYV  WKGK ISAN P+KVQF  ++  R G VKFFAHLKEDEF++L
Sbjct: 119 EIKQYVALWKGKKISANFPYKVQFVTEIEGR-GAVKFFAHLKEDEFEFL 166


Top