BLASTX nr result

ID: Coptis21_contig00000922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000922
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531622.1| conserved hypothetical protein [Ricinus comm...   159   1e-36
ref|XP_002282662.1| PREDICTED: uncharacterized protein LOC100266...   158   2e-36
gb|ADK13069.1| conserved hypothetical protein 12 [Hevea brasilie...   153   7e-35
gb|ABW74476.1| unknown [Paeonia suffruticosa]                         152   1e-34
gb|ADK13070.1| conserved hypothetical protein 13 [Hevea brasilie...   152   2e-34

>ref|XP_002531622.1| conserved hypothetical protein [Ricinus communis]
           gi|223528740|gb|EEF30750.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 189

 Score =  159 bits (402), Expect = 1e-36
 Identities = 95/190 (50%), Positives = 117/190 (61%), Gaps = 14/190 (7%)
 Frame = +3

Query: 96  MTQCVYQQNALAAACEEASSYS---NDRRDCVVCPKPRRLGVLNHSMND-PIRTLRWQLS 263
           M QC  Q +A +   E  SS S   ++RRD VVCPKPRR G+ N S+ND P+R+LRW LS
Sbjct: 1   MKQCAIQTSAFSTREEIRSSVSGTMSERRDPVVCPKPRRFGLFNASVNDHPVRSLRWHLS 60

Query: 264 HQVELNESKAGVDLMELILSKGG-NGAEQSAATHVA-XXXXXXXXXXXXRATNPLIQDAR 437
           HQ E+ ESKAG DL+++IL+KGG  G EQ + T VA             R  NPLIQDAR
Sbjct: 61  HQTEICESKAGNDLLDIILTKGGCYGVEQQSCTQVASSPPPFFCGSPPSRVANPLIQDAR 120

Query: 438 FGEEKXXXXXXXXXXXXXXXXXXTT--------RKGCVRAKFGHKPAAVRIEGFDCLDRD 593
           FGEE+                  ++        + GCVRA FG+KP AVR+EGFDCLDRD
Sbjct: 121 FGEEELSPISPLMPMPIQPPSSSSSSSPTSSGRKGGCVRANFGNKP-AVRVEGFDCLDRD 179

Query: 594 RRNCSIPAVA 623
           RR+CSIPA+A
Sbjct: 180 RRSCSIPALA 189


>ref|XP_002282662.1| PREDICTED: uncharacterized protein LOC100266248 [Vitis vinifera]
           gi|297737814|emb|CBI27015.3| unnamed protein product
           [Vitis vinifera]
          Length = 174

 Score =  158 bits (400), Expect = 2e-36
 Identities = 89/175 (50%), Positives = 112/175 (64%), Gaps = 6/175 (3%)
 Frame = +3

Query: 117 QNALAAACEEA--SSYSNDRRDCVVCPKPRRLGVLNHSMNDPIRTLRWQLSHQVELNESK 290
           Q    AACEE   S  +++RR  VVCPKPRRLG+LN ++ DP+R +RW LS+Q EL++SK
Sbjct: 3   QYCALAACEEMRRSVPASERRAPVVCPKPRRLGLLNATIVDPLRPIRWHLSNQTELSDSK 62

Query: 291 AGVDLMELILSKGGNGAEQSAATHVAXXXXXXXXXXXXRATNPLIQDARFGEEKXXXXXX 470
           +G DL+++IL+KGG GAE  + T VA            R  NPLIQDARFG+EK      
Sbjct: 63  SGTDLLDIILAKGGYGAE--SCTQVASSPPFFSGSPPSRVANPLIQDARFGDEKLNPISP 120

Query: 471 XXXXXXXXXXXXTT----RKGCVRAKFGHKPAAVRIEGFDCLDRDRRNCSIPAVA 623
                        +    + GC+RA FG+ P AVRIEGFDCLDRDRRNCSIPA+A
Sbjct: 121 PLVSVPSGLSSSPSSSARKGGCIRANFGNNP-AVRIEGFDCLDRDRRNCSIPALA 174


>gb|ADK13069.1| conserved hypothetical protein 12 [Hevea brasiliensis]
          Length = 176

 Score =  153 bits (387), Expect = 7e-35
 Identities = 88/181 (48%), Positives = 113/181 (62%), Gaps = 5/181 (2%)
 Frame = +3

Query: 96  MTQCVYQQNALAAACEEASSYSN----DRRDCVVCPKPRRLGVLNHSMNDPIRTLRWQLS 263
           M Q    +NA+A+ C++  +       D +  VVCPKPRR+G+L    N+P R LRW +S
Sbjct: 1   MNQFNLHKNAIAS-CDQTETRGLVSIFDSKGPVVCPKPRRVGIL---ANNPSRPLRWHMS 56

Query: 264 HQVELNESKAGVDLMELILSKGGNGAEQSAATHVAXXXXXXXXXXXXRATNPLIQDARFG 443
           HQ E+ +SKAG +L+++IL K G+G EQSA  HVA            RA NP+IQDARFG
Sbjct: 57  HQAEMCDSKAGAELLDIILMKDGHGTEQSA-NHVASPLPFFCGSPPTRAANPVIQDARFG 115

Query: 444 EEKXXXXXXXXXXXXXXXXXXTTRKG-CVRAKFGHKPAAVRIEGFDCLDRDRRNCSIPAV 620
           +EK                  T+RKG CVR KFG KPAAVR+EGFDCL+RDR+N SIPA+
Sbjct: 116 DEKLTPVSPLLIPSPSSLSSPTSRKGGCVRMKFGLKPAAVRVEGFDCLNRDRQNSSIPAM 175

Query: 621 A 623
           A
Sbjct: 176 A 176


>gb|ABW74476.1| unknown [Paeonia suffruticosa]
          Length = 183

 Score =  152 bits (385), Expect = 1e-34
 Identities = 88/185 (47%), Positives = 111/185 (60%), Gaps = 9/185 (4%)
 Frame = +3

Query: 96  MTQCVYQQNALAAACEEASSY----SNDRRDCVVCPKPRRLGVLNHSMNDPIRTLRWQLS 263
           M  C  QQ  + AA EE  S      +DRRD VVCPKPRR+G+L+ +++DPIR LRW LS
Sbjct: 1   MNHCAIQQQNVYAAREEMRSPVSIPMSDRRDSVVCPKPRRMGLLDSTISDPIRPLRWHLS 60

Query: 264 -HQVELNESKAGVDLMELILSKGGNGAEQSAATHVAXXXXXXXXXXXXRATNPLIQDARF 440
            HQ E ++S+AG DL+++ILSKGG   EQS    +A            R  NP++ DARF
Sbjct: 61  HHQSEYSDSRAGTDLLDIILSKGGYSVEQS-GNQLASSPPFFSGSPPSRVANPVVLDARF 119

Query: 441 GEEKXXXXXXXXXXXXXXXXXXTT----RKGCVRAKFGHKPAAVRIEGFDCLDRDRRNCS 608
           G+EK                   +    + GC+RA +G KP  VRIEGFDCLDRDRRNCS
Sbjct: 120 GDEKITPSAPLQPLLSPGPSSSPSSSARKGGCLRANYGSKP-VVRIEGFDCLDRDRRNCS 178

Query: 609 IPAVA 623
           IPA+A
Sbjct: 179 IPALA 183


>gb|ADK13070.1| conserved hypothetical protein 13 [Hevea brasiliensis]
          Length = 176

 Score =  152 bits (383), Expect = 2e-34
 Identities = 82/154 (53%), Positives = 101/154 (65%), Gaps = 1/154 (0%)
 Frame = +3

Query: 165 DRRDCVVCPKPRRLGVLNHSMNDPIRTLRWQLSHQVELNESKAGVDLMELILSKGGNGAE 344
           D +  VVCPKPRR+G+L    N+P R LRW +SHQ E+ +SKAG +L+++IL K G+G E
Sbjct: 27  DSKGPVVCPKPRRVGIL---ANNPSRPLRWHMSHQAEMCDSKAGAELLDIILMKDGHGTE 83

Query: 345 QSAATHVAXXXXXXXXXXXXRATNPLIQDARFGEEKXXXXXXXXXXXXXXXXXXTTRKG- 521
           QSA  HVA            RA NP+IQDARFG+EK                  T+RKG 
Sbjct: 84  QSA-NHVASPLPFFCGSPPTRAANPVIQDARFGDEKLTPVSPLLIPSPSSLSSPTSRKGG 142

Query: 522 CVRAKFGHKPAAVRIEGFDCLDRDRRNCSIPAVA 623
           CVR KFG KPAAVR+EGFDCL+RDR+N SIPA+A
Sbjct: 143 CVRMKFGLKPAAVRVEGFDCLNRDRQNSSIPAMA 176


Top