BLASTX nr result

ID: Coptis21_contig00000910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000910
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269239.1| PREDICTED: uncharacterized protein LOC100258...   311   8e-83
ref|XP_004142670.1| PREDICTED: uncharacterized protein LOC101209...   311   1e-82
ref|XP_002531808.1| conserved hypothetical protein [Ricinus comm...   310   2e-82
gb|ABK93697.1| unknown [Populus trichocarpa] gi|118486849|gb|ABK...   304   1e-80
ref|XP_002323685.1| predicted protein [Populus trichocarpa] gi|2...   301   1e-79

>ref|XP_002269239.1| PREDICTED: uncharacterized protein LOC100258770 [Vitis vinifera]
          Length = 351

 Score =  311 bits (797), Expect = 8e-83
 Identities = 156/206 (75%), Positives = 174/206 (84%), Gaps = 6/206 (2%)
 Frame = +3

Query: 3   MASRPNFGLNELDFVFSTLVVGSIMNFVLMYLLAPTMGASSSNLPAIFASCPTSHMFEPG 182
           MASRPNFGLNELDFVFSTLVVGSIMNFVLMYLLAPT  + + NLPAIFA CP  HMFE G
Sbjct: 135 MASRPNFGLNELDFVFSTLVVGSIMNFVLMYLLAPTASSVTPNLPAIFAGCPPGHMFESG 194

Query: 183 AFGVLDRFGTFVYKGLVFACVGFAAGLVGTAISNGLIVLRKKMDPSFETPNKAPPTILNA 362
           ++GVL+RFGTFVYKG++FA VGFAAGLVGTAISNGLI +RKKMDP+F TPNK PPT+LNA
Sbjct: 195 SYGVLNRFGTFVYKGVLFATVGFAAGLVGTAISNGLISMRKKMDPNFVTPNKPPPTVLNA 254

Query: 363 LTWSAHMGLSSNFRYQTLNGIEFVLAKGVPPAVFKGLVVILRCLNNVLGGVSFVTLARLT 542
           +TW+ HMGLSSNFRYQTLNGIEF+LAKG+PP  FK  VV+LRC NN+LGG+SFV LARLT
Sbjct: 255 ITWAIHMGLSSNFRYQTLNGIEFLLAKGLPPLAFKSSVVVLRCFNNILGGMSFVLLARLT 314

Query: 543 GSQKVLDSGKT------DSEEKEKLV 602
           GSQ V + GK          EKEKLV
Sbjct: 315 GSQSV-EEGKVVLAEAGSDAEKEKLV 339


>ref|XP_004142670.1| PREDICTED: uncharacterized protein LOC101209534 isoform 1 [Cucumis
           sativus] gi|449449837|ref|XP_004142671.1| PREDICTED:
           uncharacterized protein LOC101209534 isoform 2 [Cucumis
           sativus] gi|449510965|ref|XP_004163824.1| PREDICTED:
           uncharacterized protein LOC101229310 isoform 1 [Cucumis
           sativus] gi|449510969|ref|XP_004163825.1| PREDICTED:
           uncharacterized protein LOC101229310 isoform 2 [Cucumis
           sativus]
          Length = 370

 Score =  311 bits (796), Expect = 1e-82
 Identities = 158/211 (74%), Positives = 177/211 (83%), Gaps = 11/211 (5%)
 Frame = +3

Query: 3   MASRPNFGLNELDFVFSTLVVGSIMNFVLMYLLAPTM--GASSSNLPAIFASCPTSHMFE 176
           MASRPNFGLNELDFVFSTLVVGSI+NF LMYLLAPT   G ++  LP+IFASCPTSHMFE
Sbjct: 148 MASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAAAGVAAQRLPSIFASCPTSHMFE 207

Query: 177 PGAFGVLDRFGTFVYKGLVFACVGFAAGLVGTAISNGLIVLRKKMDPSFETPNKAPPTIL 356
           PGAF +LDR GTFVYKG VFA VG AAGLVGTA+SNGLI+LRKKMDP FETPNKAPPT+L
Sbjct: 208 PGAFTLLDRVGTFVYKGTVFAAVGLAAGLVGTALSNGLIMLRKKMDPGFETPNKAPPTLL 267

Query: 357 NALTWSAHMGLSSNFRYQTLNGIEFVLAKGVPPAVFKGLVVILRCLNNVLGGVSFVTLAR 536
           NA+TW+ HMG+SSN RYQTLNG+E+VLAKG+PP  FK  VV+LRCLNNVLGG+SFV LAR
Sbjct: 268 NAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPLAFKSSVVVLRCLNNVLGGMSFVVLAR 327

Query: 537 LTGSQKV---------LDSGKTDSEEKEKLV 602
           +TGSQ V         LDSG    +EKEKL+
Sbjct: 328 MTGSQSVEGPKTAGVELDSG----DEKEKLL 354


>ref|XP_002531808.1| conserved hypothetical protein [Ricinus communis]
            gi|223528542|gb|EEF30565.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 680

 Score =  310 bits (793), Expect = 2e-82
 Identities = 152/201 (75%), Positives = 174/201 (86%)
 Frame = +3

Query: 3    MASRPNFGLNELDFVFSTLVVGSIMNFVLMYLLAPTMGASSSNLPAIFASCPTSHMFEPG 182
            MASRPNFGLNELDFVFSTLVVGSI+NF LMYLLAPT  A+S+ LPAIFA+CP SHMFEPG
Sbjct: 468  MASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAASATLPAIFANCPASHMFEPG 527

Query: 183  AFGVLDRFGTFVYKGLVFACVGFAAGLVGTAISNGLIVLRKKMDPSFETPNKAPPTILNA 362
            AF +++R GT VYKG +FA VGFAAGLVGTA+SNGLI +RKKMDP+FETPNK PPTILNA
Sbjct: 528  AFTLMNRLGTAVYKGTIFAAVGFAAGLVGTALSNGLITMRKKMDPTFETPNKPPPTILNA 587

Query: 363  LTWSAHMGLSSNFRYQTLNGIEFVLAKGVPPAVFKGLVVILRCLNNVLGGVSFVTLARLT 542
            +TW+ HMG+SSN RYQTLNG+EFVL KG+PP  FK  VV+LRCLNNVLGG+SFV LARLT
Sbjct: 588  VTWALHMGISSNLRYQTLNGVEFVLEKGLPPLAFKSSVVVLRCLNNVLGGMSFVILARLT 647

Query: 543  GSQKVLDSGKTDSEEKEKLVN 605
            GSQ V ++ K    EKEKL++
Sbjct: 648  GSQSVAEA-KPVLAEKEKLLD 667


>gb|ABK93697.1| unknown [Populus trichocarpa] gi|118486849|gb|ABK95259.1| unknown
           [Populus trichocarpa]
          Length = 357

 Score =  304 bits (779), Expect = 1e-80
 Identities = 150/207 (72%), Positives = 173/207 (83%), Gaps = 6/207 (2%)
 Frame = +3

Query: 3   MASRPNFGLNELDFVFSTLVVGSIMNFVLMYLLAPTMGASSSNLPAIFASCPTSHMFEPG 182
           MASRPNFGL+ELDFVFSTLVVG I+NF LMYLLAPT  A+S  LPAIFA+CPTSHMFEPG
Sbjct: 138 MASRPNFGLDELDFVFSTLVVGCILNFTLMYLLAPTAAATSQTLPAIFANCPTSHMFEPG 197

Query: 183 AFGVLDRFGTFVYKGLVFACVGFAAGLVGTAISNGLIVLRKKMDPSFETPNKAPPTILNA 362
           A+G+++R GTFVYKG +FA VGFAAGLVGTA+SNGLI +RKKMDP+FETPNKAPPT+LNA
Sbjct: 198 AYGLMNRLGTFVYKGTIFAAVGFAAGLVGTALSNGLIKMRKKMDPTFETPNKAPPTVLNA 257

Query: 363 LTWSAHMGLSSNFRYQTLNGIEFVLAKGVPPAVFKGLVVILRCLNNVLGGVSFVTLARLT 542
           LTW+ HMG SSN RYQTLNG EF+L KG+ P  FK  VV+LRCLNNVLGG+SFV LAR+T
Sbjct: 258 LTWAIHMGFSSNLRYQTLNGAEFLLEKGLSPLAFKTSVVVLRCLNNVLGGMSFVILARMT 317

Query: 543 GSQKVLDSGKTD------SEEKEKLVN 605
           GSQ V +    D      + EKEKL++
Sbjct: 318 GSQSVEEPKLVDVDVGLAAPEKEKLLD 344


>ref|XP_002323685.1| predicted protein [Populus trichocarpa] gi|222868315|gb|EEF05446.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  301 bits (770), Expect = 1e-79
 Identities = 142/188 (75%), Positives = 165/188 (87%)
 Frame = +3

Query: 3   MASRPNFGLNELDFVFSTLVVGSIMNFVLMYLLAPTMGASSSNLPAIFASCPTSHMFEPG 182
           MASRPNFGLNELDFVFSTLVVG+I+NF LMYLLAPT  A+S  LPAIFA+CPTSHMFEPG
Sbjct: 74  MASRPNFGLNELDFVFSTLVVGAILNFTLMYLLAPTAAATSQTLPAIFANCPTSHMFEPG 133

Query: 183 AFGVLDRFGTFVYKGLVFACVGFAAGLVGTAISNGLIVLRKKMDPSFETPNKAPPTILNA 362
           A+ ++ R GT VYKG++FA VGFAAGLVGT +SNGLI +RKKMDPSFETPNK PPT+LNA
Sbjct: 134 AYSLMSRLGTLVYKGIIFAAVGFAAGLVGTELSNGLIKMRKKMDPSFETPNKPPPTVLNA 193

Query: 363 LTWSAHMGLSSNFRYQTLNGIEFVLAKGVPPAVFKGLVVILRCLNNVLGGVSFVTLARLT 542
           LTW+ HMG+SSN RYQ+LNG+EF+LA G+PP  FK  VV+LRCLNNVLGG++FV LAR+T
Sbjct: 194 LTWAIHMGVSSNLRYQSLNGVEFLLANGLPPFAFKSSVVVLRCLNNVLGGMTFVILARMT 253

Query: 543 GSQKVLDS 566
           GSQ V +S
Sbjct: 254 GSQSVEES 261


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