BLASTX nr result

ID: Coptis21_contig00000908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000908
         (1226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531676.1| PREDICTED: uncharacterized protein LOC100812...    65   4e-08
gb|ABK26319.1| unknown [Picea sitchensis]                              61   5e-07
gb|AFK37283.1| unknown [Medicago truncatula]                           61   7e-07
ref|XP_003604485.1| hypothetical protein MTR_4g012950 [Medicago ...    59   3e-06
ref|XP_002304198.1| predicted protein [Populus trichocarpa] gi|2...    58   4e-06

>ref|XP_003531676.1| PREDICTED: uncharacterized protein LOC100812629 [Glycine max]
          Length = 167

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 54/147 (36%), Positives = 71/147 (48%), Gaps = 39/147 (26%)
 Frame = -3

Query: 1077 AAKEENSILGSIRAPRLEDAGLEDSALSPNSIKQAFFKAANSLREETTN----------- 931
            + KE++ +L  I  PRLEDAGLED AL P+SI +AF KAA +++    +           
Sbjct: 3    STKEQSGMLHKILPPRLEDAGLEDPALPPDSIHEAFLKAAAAVKSRAASIFSSTDDDNDG 62

Query: 930  ---SNPDP------------------PGSCGNEK--EAIGDEVGLVGVKGDGE-----DG 835
               S+P P                  PGSC  E+  E + DEV + G  GD       +G
Sbjct: 63   GCVSDPWPSAKDASDAVIGVESENELPGSCIVERGVEPVADEVKVAGEGGDASADVVVEG 122

Query: 834  FDKLVGLDVKESDGKKACVDGLEGLKI 754
             DKL G DV      +ACVD L+GL I
Sbjct: 123  GDKL-GEDV------EACVDELQGLDI 142


>gb|ABK26319.1| unknown [Picea sitchensis]
          Length = 193

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 46/139 (33%), Positives = 60/139 (43%), Gaps = 37/139 (26%)
 Frame = -3

Query: 1062 NSILGSIRAPRLEDAGLEDSALSPNSIKQAFFKAANSLREETTN---------------- 931
            N+I+ SI  PRLEDAGLED ALS   IK+AF +AA +++ + +N                
Sbjct: 37   NNIITSIIPPRLEDAGLEDCALSAEGIKEAFLRAAEAMKSKASNVFHDGECIEDTGSSNG 96

Query: 930  -------SNPDPPGSCGNEKEAIGDEVGLVGVKGDGEDGFDKLVG--------------L 814
                    N   P      +  +G  VG     G  E+G DKLV               L
Sbjct: 97   EWTDSLEENSRIPNEADESQSCVGSRVG-----GLVEEGTDKLVDLGSNEVQDEVIDAQL 151

Query: 813  DVKESDGKKACVDGLEGLK 757
             VK      ACV GLEG++
Sbjct: 152  SVKHPGEDGACVQGLEGME 170


>gb|AFK37283.1| unknown [Medicago truncatula]
          Length = 104

 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 42/106 (39%), Positives = 58/106 (54%)
 Frame = -3

Query: 1077 AAKEENSILGSIRAPRLEDAGLEDSALSPNSIKQAFFKAANSLREETTNSNPDPPGSCGN 898
            + +++  +L  I  PRLEDAGLED AL P SI +AF KAA +++     S+        +
Sbjct: 3    STEKQPGLLQQIVPPRLEDAGLEDPALPPKSIHEAFLKAAAAVKSRIFTSS--------D 54

Query: 897  EKEAIGDEVGLVGVKGDGEDGFDKLVGLDVKESDGKKACVDGLEGL 760
            E + I D       K  GED  D +VG+   E+    ACVDGL+GL
Sbjct: 55   EDDCIDDP------KPSGEDVSD-VVGVIELENKEPGACVDGLQGL 93


>ref|XP_003604485.1| hypothetical protein MTR_4g012950 [Medicago truncatula]
            gi|355505540|gb|AES86682.1| hypothetical protein
            MTR_4g012950 [Medicago truncatula]
          Length = 150

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 40/106 (37%), Positives = 56/106 (52%)
 Frame = -3

Query: 1077 AAKEENSILGSIRAPRLEDAGLEDSALSPNSIKQAFFKAANSLREETTNSNPDPPGSCGN 898
            + +++  +L  I  PRLEDA LED AL P SI +AF KA  +++     S+        +
Sbjct: 3    STEKQPGLLQQIVPPRLEDACLEDPALPPESIHEAFLKAVAAMKSRIFTSS--------D 54

Query: 897  EKEAIGDEVGLVGVKGDGEDGFDKLVGLDVKESDGKKACVDGLEGL 760
            E + I D       K  GED  D +VG+   E +   ACVDGL+GL
Sbjct: 55   EDDCIDDP------KPGGEDASD-VVGVIESEKEEPGACVDGLQGL 93


>ref|XP_002304198.1| predicted protein [Populus trichocarpa] gi|222841630|gb|EEE79177.1|
            predicted protein [Populus trichocarpa]
          Length = 168

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
 Frame = -3

Query: 1077 AAKEENSILGSIRAPRLEDAGLEDSALSPNSIKQAFFKAANSLREETTN--SNPDPPGSC 904
            A KE   +L  I  PRLEDAGLED AL P+ IK+AF KAA++++   T+  S+ D    C
Sbjct: 3    ATKEGTGLLDKIVPPRLEDAGLEDCALPPDLIKEAFLKAASAVKSRATSIFSDEDESAEC 62

Query: 903  GNE------KEAIGDEVGLVGVKGDGEDGFDKLVGLDV-KESDGKKACV 778
              +      K A    VG+  V G      D LVG+++ KE+ G  +CV
Sbjct: 63   VQDPWPEGAKFASDKLVGVPPVPG----ASDALVGIEMGKETPG--SCV 105


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