BLASTX nr result

ID: Coptis21_contig00000906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000906
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328083.1| vitamin-b12 independent methionine synthase,...   634   e-179
ref|XP_002515852.1| 5-methyltetrahydropteroyltriglutamate--homoc...   632   e-179
ref|XP_002525709.1| 5-methyltetrahydropteroyltriglutamate--homoc...   631   e-179
gb|ABI35986.1| methionine synthase [Orobanche ramosa]                 628   e-178
ref|XP_002325856.1| vitamin-b12 independent methionine synthase,...   628   e-178

>ref|XP_002328083.1| vitamin-b12 independent methionine synthase,
            5-methyltetrahydropteroyltriglutamate-homocysteine
            [Populus trichocarpa] gi|222837598|gb|EEE75963.1|
            vitamin-b12 independent methionine synthase,
            5-methyltetrahydropteroyltriglutamate-homocysteine
            [Populus trichocarpa]
          Length = 765

 Score =  634 bits (1634), Expect = e-179
 Identities = 320/351 (91%), Positives = 325/351 (92%)
 Frame = +3

Query: 3    AQKVVEVNALAKALAGQKDEXXXXXXXXXXXXXXXXPRVNNEAVQKAAAALKGSDHRRAT 182
            AQKVVEVNALAKALAGQ+DE                PRV NEAVQKAA ALKGSDHRRAT
Sbjct: 355  AQKVVEVNALAKALAGQQDEAFFSANAAAQASRKSSPRVTNEAVQKAAVALKGSDHRRAT 414

Query: 183  NVSARLDAQQKKLNLPILPTTTIGSFPQTADLRRVRREYKAKKISEDNYVSAIKEEISKV 362
            NVSARLDAQQKKLNLPILPTTTIGSFPQT DLRRVRREYKAKKISE NYV AIKEEI+KV
Sbjct: 415  NVSARLDAQQKKLNLPILPTTTIGSFPQTMDLRRVRREYKAKKISEQNYVEAIKEEINKV 474

Query: 363  VKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSR 542
            VK+QEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPP+IYGDVSR
Sbjct: 475  VKIQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSR 534

Query: 543  PKAMTVFWSSMAQSMTARPMKGMLTGPVTILNWSFVRNDQPRSETCYQIALAIKDEVEDL 722
            PKAMTVFWSSMAQSMT RPMKGMLTGPVTILNWSFVRNDQPR ETCYQIALAIKDEVEDL
Sbjct: 535  PKAMTVFWSSMAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDL 594

Query: 723  EKAGITVIQIDEAALREGLPLRKSEEAFYLEWAVHSFRITNVGVKDTTQIHTHMCYSNFN 902
            EKAGITVIQIDEAALREGLPLRKSE AFYL WAVHSFRITN GV+DTTQIHTHMCYSNFN
Sbjct: 595  EKAGITVIQIDEAALREGLPLRKSEHAFYLNWAVHSFRITNCGVEDTTQIHTHMCYSNFN 654

Query: 903  DIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRI 1055
            DIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRI
Sbjct: 655  DIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRI 705


>ref|XP_002515852.1| 5-methyltetrahydropteroyltriglutamate--homocysteine
            methyltransferase, putative [Ricinus communis]
            gi|223545007|gb|EEF46521.1|
            5-methyltetrahydropteroyltriglutamate--homocysteine
            methyltransferase, putative [Ricinus communis]
          Length = 815

 Score =  632 bits (1631), Expect = e-179
 Identities = 318/351 (90%), Positives = 328/351 (93%)
 Frame = +3

Query: 3    AQKVVEVNALAKALAGQKDEXXXXXXXXXXXXXXXXPRVNNEAVQKAAAALKGSDHRRAT 182
            AQKV+EVNALAKALAG +DE                PRV NEAVQ+AAAALKGSDHRRAT
Sbjct: 405  AQKVLEVNALAKALAGNRDEAFFSSNALAHASRKSSPRVTNEAVQQAAAALKGSDHRRAT 464

Query: 183  NVSARLDAQQKKLNLPILPTTTIGSFPQTADLRRVRREYKAKKISEDNYVSAIKEEISKV 362
            NVSARLDAQQKKLNLPILPTTTIGSFPQT DLRRVRREYKAKKISED+YV AIKEEISKV
Sbjct: 465  NVSARLDAQQKKLNLPILPTTTIGSFPQTLDLRRVRREYKAKKISEDDYVKAIKEEISKV 524

Query: 363  VKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSR 542
            VK+QEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPP+IYGDVSR
Sbjct: 525  VKIQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSR 584

Query: 543  PKAMTVFWSSMAQSMTARPMKGMLTGPVTILNWSFVRNDQPRSETCYQIALAIKDEVEDL 722
            PKAMTVFWSSMAQSMT+RPMKGMLTGPVTILNWSFVRNDQPR ETCYQIALAIKDEVEDL
Sbjct: 585  PKAMTVFWSSMAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDL 644

Query: 723  EKAGITVIQIDEAALREGLPLRKSEEAFYLEWAVHSFRITNVGVKDTTQIHTHMCYSNFN 902
            EKAGITVIQIDEAALREGLPLRKSE AFYL+WAVHSFRITN GV+DTTQIHTHMCYSNFN
Sbjct: 645  EKAGITVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVEDTTQIHTHMCYSNFN 704

Query: 903  DIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRI 1055
            DIIHSII+MDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRI
Sbjct: 705  DIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRI 755


>ref|XP_002525709.1| 5-methyltetrahydropteroyltriglutamate--homocysteine
            methyltransferase, putative [Ricinus communis]
            gi|223535009|gb|EEF36692.1|
            5-methyltetrahydropteroyltriglutamate--homocysteine
            methyltransferase, putative [Ricinus communis]
          Length = 765

 Score =  631 bits (1628), Expect = e-179
 Identities = 317/351 (90%), Positives = 326/351 (92%)
 Frame = +3

Query: 3    AQKVVEVNALAKALAGQKDEXXXXXXXXXXXXXXXXPRVNNEAVQKAAAALKGSDHRRAT 182
            AQK+VEVNALAKALAG+KDE                PRV NEAVQKAAAALKGSDHRRAT
Sbjct: 355  AQKIVEVNALAKALAGEKDEAFFSANAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRAT 414

Query: 183  NVSARLDAQQKKLNLPILPTTTIGSFPQTADLRRVRREYKAKKISEDNYVSAIKEEISKV 362
            NVSARLDAQQKKLNLPILPTTTIGSFPQT +LRRVRREYKAKK+SED+YV AIKEEISKV
Sbjct: 415  NVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKVSEDDYVKAIKEEISKV 474

Query: 363  VKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSR 542
            VKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFT NGWVQSYGSRCVKPP+IYGDVSR
Sbjct: 475  VKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSR 534

Query: 543  PKAMTVFWSSMAQSMTARPMKGMLTGPVTILNWSFVRNDQPRSETCYQIALAIKDEVEDL 722
            P  MTVFWSS AQSMTARPMKGMLTGPVTILNWSFVRNDQPR ETCYQIALAIKDEVEDL
Sbjct: 535  PNPMTVFWSSTAQSMTARPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDL 594

Query: 723  EKAGITVIQIDEAALREGLPLRKSEEAFYLEWAVHSFRITNVGVKDTTQIHTHMCYSNFN 902
            EKAGI VIQIDEAALREGLPLRKSE+AFYL+WAVHSFRITNVGV+DTTQIHTHMCYSNFN
Sbjct: 595  EKAGINVIQIDEAALREGLPLRKSEQAFYLDWAVHSFRITNVGVQDTTQIHTHMCYSNFN 654

Query: 903  DIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRI 1055
            DIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRI
Sbjct: 655  DIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRI 705


>gb|ABI35986.1| methionine synthase [Orobanche ramosa]
          Length = 765

 Score =  628 bits (1620), Expect = e-178
 Identities = 316/351 (90%), Positives = 326/351 (92%)
 Frame = +3

Query: 3    AQKVVEVNALAKALAGQKDEXXXXXXXXXXXXXXXXPRVNNEAVQKAAAALKGSDHRRAT 182
            AQKVVEVNALAKALAG+KDE                PRV NEAVQKAAAALKGSDHRRAT
Sbjct: 355  AQKVVEVNALAKALAGEKDEAFFSANAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRAT 414

Query: 183  NVSARLDAQQKKLNLPILPTTTIGSFPQTADLRRVRREYKAKKISEDNYVSAIKEEISKV 362
            NVSARLDAQQKKLNLPILPTTTIGSFPQT +LRRVRREYKAKKISE+ Y+ AIKEEI+KV
Sbjct: 415  NVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYIKAIKEEINKV 474

Query: 363  VKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSR 542
            VKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPP+IYGDVSR
Sbjct: 475  VKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSR 534

Query: 543  PKAMTVFWSSMAQSMTARPMKGMLTGPVTILNWSFVRNDQPRSETCYQIALAIKDEVEDL 722
            PK MTVFWS+ AQSMT RPMKGMLTGPVTILNWSFVRNDQPR ETCYQIALAIKDEVEDL
Sbjct: 535  PKPMTVFWSTAAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDL 594

Query: 723  EKAGITVIQIDEAALREGLPLRKSEEAFYLEWAVHSFRITNVGVKDTTQIHTHMCYSNFN 902
            EKAGITVIQIDEAALREGLPLRKSE AFYL+WAVHSFRITNVGV+DTTQIHTHMCYSNFN
Sbjct: 595  EKAGITVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNVGVEDTTQIHTHMCYSNFN 654

Query: 903  DIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRI 1055
            DIIHSII+MDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRI
Sbjct: 655  DIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRI 705


>ref|XP_002325856.1| vitamin-b12 independent methionine synthase,
            5-methyltetrahydropteroyltriglutamate-homocysteine
            [Populus trichocarpa] gi|222862731|gb|EEF00238.1|
            vitamin-b12 independent methionine synthase,
            5-methyltetrahydropteroyltriglutamate-homocysteine
            [Populus trichocarpa]
          Length = 765

 Score =  628 bits (1619), Expect = e-178
 Identities = 315/351 (89%), Positives = 327/351 (93%)
 Frame = +3

Query: 3    AQKVVEVNALAKALAGQKDEXXXXXXXXXXXXXXXXPRVNNEAVQKAAAALKGSDHRRAT 182
            AQKVVEVNALAKALAGQKDE                PRVNNEAVQKAAAALKGSDHRRAT
Sbjct: 355  AQKVVEVNALAKALAGQKDEEIFSANAAALASRKSSPRVNNEAVQKAAAALKGSDHRRAT 414

Query: 183  NVSARLDAQQKKLNLPILPTTTIGSFPQTADLRRVRREYKAKKISEDNYVSAIKEEISKV 362
            NVSARLDAQQKKLNLPILPTTTIGSFPQT +LR+VRREYKAKK+SED+YV AIKEEI KV
Sbjct: 415  NVSARLDAQQKKLNLPILPTTTIGSFPQTMELRKVRREYKAKKVSEDDYVKAIKEEIRKV 474

Query: 363  VKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSR 542
            VKLQEE DIDVLVHGEPERNDMVEYFGEQLSGFAF+ANGWVQSYGSRCVKPP+IYGDVSR
Sbjct: 475  VKLQEEFDIDVLVHGEPERNDMVEYFGEQLSGFAFSANGWVQSYGSRCVKPPIIYGDVSR 534

Query: 543  PKAMTVFWSSMAQSMTARPMKGMLTGPVTILNWSFVRNDQPRSETCYQIALAIKDEVEDL 722
            PK+MTVFWS++AQSMTARPMKGMLTGPVTILNWSFVRNDQPR ETCYQIALAIKDEVEDL
Sbjct: 535  PKSMTVFWSTLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRYETCYQIALAIKDEVEDL 594

Query: 723  EKAGITVIQIDEAALREGLPLRKSEEAFYLEWAVHSFRITNVGVKDTTQIHTHMCYSNFN 902
            EK GITVIQIDEAALREGLPLRKSE+AFYL+WAVHSFRITN GV+DTTQIHTHMCYSNFN
Sbjct: 595  EKNGITVIQIDEAALREGLPLRKSEQAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFN 654

Query: 903  DIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRI 1055
            DII SIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRI
Sbjct: 655  DIIQSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRI 705


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