BLASTX nr result

ID: Coptis21_contig00000902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000902
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144291.1| PREDICTED: UPF0392 protein At1g27200-like [C...   233   6e-59
ref|XP_002272531.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   229   6e-58
emb|CBI40723.3| unnamed protein product [Vitis vinifera]              229   6e-58
ref|XP_003527638.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   216   6e-54
ref|XP_002510683.1| conserved hypothetical protein [Ricinus comm...   215   2e-53

>ref|XP_004144291.1| PREDICTED: UPF0392 protein At1g27200-like [Cucumis sativus]
            gi|449489430|ref|XP_004158309.1| PREDICTED: UPF0392
            protein At1g27200-like [Cucumis sativus]
          Length = 577

 Score =  233 bits (594), Expect = 6e-59
 Identities = 131/303 (43%), Positives = 187/303 (61%), Gaps = 24/303 (7%)
 Frame = +3

Query: 210  FFFGQKLHLSPST---IKSLQHNNLIKEEVEEDS--------HRLVRNPPLVKYVQPESV 356
            FFFG  L++S S+   + S   N+++   + E +        HR      ++  +   S+
Sbjct: 29   FFFGADLNISSSSSNLLPSRSANSVVHYALHETNLDFPQQLTHRTRHVSSILDPIPTVSL 88

Query: 357  LLPDWEVLFVSS---PHSIWSKDNEYTCVFQNNETSPGEYTGFLQSSNRTVFKCEVPDSV 527
            LLPDWEVL +SS   P S      ++ C+FQNN TS   ++G L  + R  FKC +P+SV
Sbjct: 89   LLPDWEVLLISSIDTPLSSPDSFRDFLCLFQNNATSSANFSGVLDFTGRVTFKCLMPESV 148

Query: 528  RCIRPLLKPILTKSDE---NITFSNGSNAVEMIRWSFFVYESLSTENDVILFAKGLNNRQ 698
            R +RP  +P+LTKS +   + + S+ S A E++RW+FF YE+  TE DV+LF KG+NNRQ
Sbjct: 149  RRLRPFFQPLLTKSPDKEFSSSLSSSSPAPELMRWTFFAYEAFETEEDVVLFVKGVNNRQ 208

Query: 699  GVNRSPEELLCVFDNGVGYSVKTSVVTSAQEVFRCNHPTETELGSLFKDGDEKIKISLEI 878
            G NR P +L CVF +G   +++T+V +S QEVFRC HP  T       +  +K KI+LEI
Sbjct: 209  GSNRQPTDLNCVFGDG-DDAIRTAVTSSVQEVFRCRHPNLTT-----SEDHDKFKITLEI 262

Query: 879  VGRR--PVRVPSVAYYVPKSSIEDG-----EGKAQLCACTMVYNVAKFLKEWVIYNSKLG 1037
            +  R   + VPSVAYY P+ S + G     E ++ +CACTMVYNV KFL+EWV+Y S++G
Sbjct: 263  LDARGKNILVPSVAYYSPRRSGDGGGLVETEAQSMICACTMVYNVGKFLREWVMYYSRIG 322

Query: 1038 VEK 1046
            VEK
Sbjct: 323  VEK 325


>ref|XP_002272531.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
          Length = 595

 Score =  229 bits (585), Expect = 6e-58
 Identities = 122/235 (51%), Positives = 153/235 (65%), Gaps = 2/235 (0%)
 Frame = +3

Query: 348  ESVLLPDWEVLFVSSPHSIWSKDN--EYTCVFQNNETSPGEYTGFLQSSNRTVFKCEVPD 521
            ESVL PDWEVL + SP    S ++  +Y CVF NN TSP         + R  FKC +P 
Sbjct: 111  ESVLFPDWEVLIIVSPEGEVSSESGEDYQCVFHNNATSPARPAWVFPFTKRRTFKCVIPR 170

Query: 522  SVRCIRPLLKPILTKSDENITFSNGSNAVEMIRWSFFVYESLSTENDVILFAKGLNNRQG 701
             +R  RP  +P LT++         S   E+ RW+F  YESLST+NDV+LF KG+NNRQG
Sbjct: 171  RIRRFRPYFQPALTRAAPAKQREIHSFTRELFRWTFLAYESLSTQNDVVLFVKGVNNRQG 230

Query: 702  VNRSPEELLCVFDNGVGYSVKTSVVTSAQEVFRCNHPTETELGSLFKDGDEKIKISLEIV 881
            VNRSP +L CVF N    +V+T+V TS+QEVFRC HP    L S  +  +E+IKISLEI 
Sbjct: 231  VNRSPSQLRCVFGNDATIAVRTAVTTSSQEVFRCRHPDLRAL-SHGEIENERIKISLEIS 289

Query: 882  GRRPVRVPSVAYYVPKSSIEDGEGKAQLCACTMVYNVAKFLKEWVIYNSKLGVEK 1046
                V VPSVAYY P  ++   E K+QLCA TM+YN AKFLKEWV+Y+S++GVEK
Sbjct: 290  DENRV-VPSVAYYTPMRTVATLEPKSQLCASTMIYNAAKFLKEWVVYHSRIGVEK 343


>emb|CBI40723.3| unnamed protein product [Vitis vinifera]
          Length = 565

 Score =  229 bits (585), Expect = 6e-58
 Identities = 122/235 (51%), Positives = 153/235 (65%), Gaps = 2/235 (0%)
 Frame = +3

Query: 348  ESVLLPDWEVLFVSSPHSIWSKDN--EYTCVFQNNETSPGEYTGFLQSSNRTVFKCEVPD 521
            ESVL PDWEVL + SP    S ++  +Y CVF NN TSP         + R  FKC +P 
Sbjct: 81   ESVLFPDWEVLIIVSPEGEVSSESGEDYQCVFHNNATSPARPAWVFPFTKRRTFKCVIPR 140

Query: 522  SVRCIRPLLKPILTKSDENITFSNGSNAVEMIRWSFFVYESLSTENDVILFAKGLNNRQG 701
             +R  RP  +P LT++         S   E+ RW+F  YESLST+NDV+LF KG+NNRQG
Sbjct: 141  RIRRFRPYFQPALTRAAPAKQREIHSFTRELFRWTFLAYESLSTQNDVVLFVKGVNNRQG 200

Query: 702  VNRSPEELLCVFDNGVGYSVKTSVVTSAQEVFRCNHPTETELGSLFKDGDEKIKISLEIV 881
            VNRSP +L CVF N    +V+T+V TS+QEVFRC HP    L S  +  +E+IKISLEI 
Sbjct: 201  VNRSPSQLRCVFGNDATIAVRTAVTTSSQEVFRCRHPDLRAL-SHGEIENERIKISLEIS 259

Query: 882  GRRPVRVPSVAYYVPKSSIEDGEGKAQLCACTMVYNVAKFLKEWVIYNSKLGVEK 1046
                V VPSVAYY P  ++   E K+QLCA TM+YN AKFLKEWV+Y+S++GVEK
Sbjct: 260  DENRV-VPSVAYYTPMRTVATLEPKSQLCASTMIYNAAKFLKEWVVYHSRIGVEK 313


>ref|XP_003527638.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max]
          Length = 585

 Score =  216 bits (551), Expect = 6e-54
 Identities = 119/242 (49%), Positives = 159/242 (65%), Gaps = 11/242 (4%)
 Frame = +3

Query: 351  SVLLPDWEVLFVSSPHSIWSKDNEYTCVFQNNETSPGEYTGFLQSSNRTVFKCEVPDSVR 530
            SVL+PDWE+L + +P++  S  +   C+F NN +SP +++G L  +NRT FKC++P+ VR
Sbjct: 84   SVLIPDWEILVIVAPNTPLSSSDTPHCLFPNNASSPAKFSGVLPFTNRTTFKCDLPEPVR 143

Query: 531  CIRPLLKPILTKSDENITFSNGSNAVEMIRWSFFVYESLSTENDVILFAKGLNNRQGVNR 710
              R   +P+L  S  + T    S A E+++W+F VYES STENDV++FAKG+N+R G NR
Sbjct: 144  RRRMFSQPMLVTSPTSET-EFPSPAPELLKWNFLVYESFSTENDVVVFAKGVNHRNGDNR 202

Query: 711  SPEELLCVFDNGVGYSVKTSVVTSAQEVFRCNHPTETELGSLFKDG-DEKIKISLEIVGR 887
            SPEEL CVFD G G  +  +V +S QEVFRC HP  +EL      G   +I ISLEIV  
Sbjct: 203  SPEELRCVFDLGSGV-LNVAVTSSVQEVFRCPHPDPSELDFDSHYGLPNRIGISLEIVSE 261

Query: 888  RPVRVPSVAYYVPKSSIE----------DGEGKAQLCACTMVYNVAKFLKEWVIYNSKLG 1037
              V VPSVAYY+PK  ++              K  LCACTMVYNVAK L+EWV+Y++K+G
Sbjct: 262  NTV-VPSVAYYIPKPGLKPKLMTNDLSVQARPKYFLCACTMVYNVAKVLREWVMYHAKVG 320

Query: 1038 VE 1043
            VE
Sbjct: 321  VE 322


>ref|XP_002510683.1| conserved hypothetical protein [Ricinus communis]
            gi|223551384|gb|EEF52870.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 604

 Score =  215 bits (547), Expect = 2e-53
 Identities = 135/299 (45%), Positives = 185/299 (61%), Gaps = 15/299 (5%)
 Frame = +3

Query: 195  YVVRNFFFG-QKLHLSPSTIKSLQHNNLIKEEVEEDSHRLVRNPPLVKYVQPESVLLPDW 371
            Y  RN  +  Q L+ SP+ +     NN I+E +  + +   R    + +    SVL PDW
Sbjct: 62   YFSRNSIYTTQVLYPSPNLVPP---NNAIQESIILNLNHPQRVQDSI-FTPSVSVLFPDW 117

Query: 372  EVLFVSSP--HSIWS--KDNEYTCVFQNNETSPGEYTGFLQSSNRTVFKCEVPDSVRCIR 539
            EVL + SP  HS +     +  TC + NN TSP  ++  L S+N+T FKC +P S R   
Sbjct: 118  EVLVIVSPEIHSDFPFLSAHNLTCFYPNNATSPARFSEILPSTNQTTFKCLLPRSSRRRL 177

Query: 540  PLLKPILTKSDEN---ITFSNGSNAVEMIRWSFFVYESLSTENDVILFAKGLNNRQGVNR 710
            P + P+L +  E    I     S   E++RWS  VYES S ENDV+LFAKGLNNRQG+NR
Sbjct: 178  PFVAPVLMRLLEKELPIPRPLSSPPEEILRWSKLVYESFSAENDVVLFAKGLNNRQGINR 237

Query: 711  SPEELLCVF----DNGVGYSVKTSVVTSAQEVFRCNHPTETELGSLFKDGDE--KIKISL 872
            SP EL CVF    DN +   VKT+V +S QEVFRC+HP  T L S  ++G++  K+K+SL
Sbjct: 238  SPSELRCVFIHESDNNI--IVKTAVTSSIQEVFRCDHPDLTALVSGVEEGEDPIKLKVSL 295

Query: 873  EIVGRRPVRVPSVAYYVPKSSIEDGE-GKAQLCACTMVYNVAKFLKEWVIYNSKLGVEK 1046
            E++  + V +P+V+YY P   I + E  K+QLCA TMVYNV K+L+EWV+Y+SK+G+EK
Sbjct: 296  EVLEVKKV-MPTVSYYNPWRKIANPETKKSQLCATTMVYNVGKYLREWVMYHSKIGIEK 353


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