BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000893
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266663.1| PREDICTED: exosome complex component CSL4 [V...   228   3e-58
ref|XP_003590923.1| Ammonium transporter [Medicago truncatula] g...   217   7e-55
dbj|BAJ88393.1| predicted protein [Hordeum vulgare subsp. vulgare]    215   3e-54
gb|ACU17429.1| unknown [Glycine max]                                  215   3e-54
ref|NP_001148354.1| 3-5 exoribonuclease CSL4 [Zea mays] gi|19561...   214   4e-54

>ref|XP_002266663.1| PREDICTED: exosome complex component CSL4 [Vitis vinifera]
           gi|296085148|emb|CBI28643.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  228 bits (582), Expect = 3e-58
 Identities = 115/142 (80%), Positives = 127/142 (89%)
 Frame = +2

Query: 5   PHKRTVHASITGRRNFIPPSSNSTDQRPTVEVTGNKAHGAVPEAGSIVIARVVKVMPRMA 184
           P   TV+AS+TGRR+ IPPS  S+DQRPTVEVTG+ AHGA+PE GSIVIARV KVM RMA
Sbjct: 33  PQNGTVYASLTGRRSLIPPSPLSSDQRPTVEVTGHSAHGAIPEPGSIVIARVTKVMARMA 92

Query: 185 SADIMCVGAKSVREKFNGVIRQQDVRATEIDKVEMHSSFRPGDVVKAQVLSLGDARAYYL 364
           SADIMCVG KSVREKF G+IRQQDVRATEIDKV+MHSSFRPGD+V+A VLSLGDARAY+L
Sbjct: 93  SADIMCVGPKSVREKFTGIIRQQDVRATEIDKVDMHSSFRPGDIVRALVLSLGDARAYFL 152

Query: 365 STAKDELGVVSAESTAGGTMVP 430
           STAK+ELGVVSAES AG TMVP
Sbjct: 153 STAKNELGVVSAESAAGATMVP 174


>ref|XP_003590923.1| Ammonium transporter [Medicago truncatula]
           gi|355479971|gb|AES61174.1| Ammonium transporter
           [Medicago truncatula]
          Length = 1109

 Score =  217 bits (553), Expect = 7e-55
 Identities = 109/143 (76%), Positives = 125/143 (87%)
 Frame = +2

Query: 2   SPHKRTVHASITGRRNFIPPSSNSTDQRPTVEVTGNKAHGAVPEAGSIVIARVVKVMPRM 181
           S H  TV+AS+TG R+ IPP+S+S DQRP VEVTG+KAHG VPE GS+VI RV KVM ++
Sbjct: 29  STHNNTVYASLTGFRHTIPPASDSPDQRPIVEVTGHKAHGPVPEPGSVVIVRVTKVMTKI 88

Query: 182 ASADIMCVGAKSVREKFNGVIRQQDVRATEIDKVEMHSSFRPGDVVKAQVLSLGDARAYY 361
           A ADIMCVG KSVREKF GVIRQQDVRATEIDKV+MH SFRPGD+VKA VLSLG+ARAY+
Sbjct: 89  AEADIMCVGQKSVREKFTGVIRQQDVRATEIDKVDMHLSFRPGDIVKALVLSLGNARAYF 148

Query: 362 LSTAKDELGVVSAESTAGGTMVP 430
           L+TAK+ELGVVSAESTAG T+VP
Sbjct: 149 LTTAKNELGVVSAESTAGATLVP 171


>dbj|BAJ88393.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 200

 Score =  215 bits (548), Expect = 3e-54
 Identities = 106/139 (76%), Positives = 125/139 (89%)
 Frame = +2

Query: 14  RTVHASITGRRNFIPPSSNSTDQRPTVEVTGNKAHGAVPEAGSIVIARVVKVMPRMASAD 193
           R+V AS+TGRR F+PP+  S+DQR TVEV G+KAHGAVP+ GSIVIARV KVM RMASAD
Sbjct: 39  RSVRASVTGRRRFVPPAPGSSDQRSTVEVVGHKAHGAVPQPGSIVIARVTKVMARMASAD 98

Query: 194 IMCVGAKSVREKFNGVIRQQDVRATEIDKVEMHSSFRPGDVVKAQVLSLGDARAYYLSTA 373
           IMCV +K+V+EKF G+IRQQDVRATEIDKV+M+ S+RPGD+V+A VLSLGDARAYYLSTA
Sbjct: 99  IMCVDSKAVKEKFTGMIRQQDVRATEIDKVDMYQSYRPGDIVRALVLSLGDARAYYLSTA 158

Query: 374 KDELGVVSAESTAGGTMVP 430
           K+ELGVVSA+S AGGT+VP
Sbjct: 159 KNELGVVSAQSIAGGTLVP 177


>gb|ACU17429.1| unknown [Glycine max]
          Length = 189

 Score =  215 bits (547), Expect = 3e-54
 Identities = 107/141 (75%), Positives = 123/141 (87%)
 Frame = +2

Query: 8   HKRTVHASITGRRNFIPPSSNSTDQRPTVEVTGNKAHGAVPEAGSIVIARVVKVMPRMAS 187
           H  TV+AS+TG R+ +PP+ +S+D RPTVEVTG+KAHG VP+ GS+VIARV KVM R AS
Sbjct: 33  HNNTVYASLTGFRHTVPPAPDSSDLRPTVEVTGHKAHGPVPQPGSVVIARVTKVMARSAS 92

Query: 188 ADIMCVGAKSVREKFNGVIRQQDVRATEIDKVEMHSSFRPGDVVKAQVLSLGDARAYYLS 367
           ADIMCVG KSVREKF G+IRQQDVRATEIDKV+MH SF PGD+V+A VLSLGDARAY+LS
Sbjct: 93  ADIMCVGPKSVREKFTGIIRQQDVRATEIDKVDMHLSFHPGDIVRALVLSLGDARAYFLS 152

Query: 368 TAKDELGVVSAESTAGGTMVP 430
           TAK+ELGVVSAES AG TMVP
Sbjct: 153 TAKNELGVVSAESIAGATMVP 173


>ref|NP_001148354.1| 3-5 exoribonuclease CSL4 [Zea mays] gi|195618352|gb|ACG31006.1| 3-5
           exoribonuclease CSL4 [Zea mays]
           gi|223975657|gb|ACN32016.1| unknown [Zea mays]
           gi|413939469|gb|AFW74020.1| 3-5 exoribonuclease CSL4
           [Zea mays]
          Length = 199

 Score =  214 bits (546), Expect = 4e-54
 Identities = 105/139 (75%), Positives = 123/139 (88%)
 Frame = +2

Query: 14  RTVHASITGRRNFIPPSSNSTDQRPTVEVTGNKAHGAVPEAGSIVIARVVKVMPRMASAD 193
           R+V AS+TGRR  +PP+  S DQR TVEV G+KAHGAVP+ GS+VIARV KVM RMASAD
Sbjct: 38  RSVRASVTGRRRIVPPAPGSDDQRSTVEVVGHKAHGAVPQPGSVVIARVTKVMARMASAD 97

Query: 194 IMCVGAKSVREKFNGVIRQQDVRATEIDKVEMHSSFRPGDVVKAQVLSLGDARAYYLSTA 373
           IMCV +K++REKF G+IRQQDVRATEIDKV+M+ S+RPGD+VKA VLSLGDARAYYLSTA
Sbjct: 98  IMCVDSKAIREKFTGMIRQQDVRATEIDKVDMYQSYRPGDIVKAMVLSLGDARAYYLSTA 157

Query: 374 KDELGVVSAESTAGGTMVP 430
           K+ELGVVSA+S AGGT+VP
Sbjct: 158 KNELGVVSAQSIAGGTLVP 176