BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000880
         (1072 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cy...   359   7e-97
gb|ABK22180.1| unknown [Picea sitchensis]                             351   2e-94
ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vi...   342   9e-92
ref|XP_003563809.1| PREDICTED: uncharacterized protein LOC100835...   342   1e-91
gb|AFK42884.1| unknown [Lotus japonicus]                              341   2e-91

>ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear
            [Vitis vinifera] gi|296088694|emb|CBI38144.3| unnamed
            protein product [Vitis vinifera]
          Length = 292

 Score =  359 bits (921), Expect = 7e-97
 Identities = 176/224 (78%), Positives = 192/224 (85%)
 Frame = -3

Query: 1046 DFNSDGSPNNRRRKNNYTQXXXXXXXXXXXXXREDSVRRTVYVSDIDQHITEEHLAALFI 867
            D  +D  PNNRRR+NNY Q             REDS+RRTVYVSDIDQH+TEE LAALF 
Sbjct: 69   DSPNDAYPNNRRRRNNYNQGRRRLSGRAFRAQREDSIRRTVYVSDIDQHVTEERLAALFS 128

Query: 866  NCGQVVDCRVCGDPHSVLRFAFIEFADEQGARAALSLAGTMLGYYPVRVLPSKTAILPVN 687
            +CGQVVDCRVCGDPHSVLRFAF+EFADE GARAAL+L GTMLGYYPVRVLPSKTAILPVN
Sbjct: 129  SCGQVVDCRVCGDPHSVLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVN 188

Query: 686  PVFLPRSEDEREMCARTVYCTNIDKEVSHTDVKVFFESICGEVSRLRLLGDHVHSTRIAF 507
            P FLPRSEDEREMCARTVYCTNIDK+VS  +VK FFE  CGEVSRLRLLGDHVHSTRIAF
Sbjct: 189  PTFLPRSEDEREMCARTVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAF 248

Query: 506  VEFVIAESAIIALNCSGMILGSLPVRVSPSKTPVRPRSPRAMLN 375
            VEF +AESAI+ALNCSG++LG+ P+RVSPSKTPVRPR PRA L+
Sbjct: 249  VEFAMAESAIVALNCSGLVLGTQPIRVSPSKTPVRPRVPRATLH 292


>gb|ABK22180.1| unknown [Picea sitchensis]
          Length = 288

 Score =  351 bits (901), Expect = 2e-94
 Identities = 171/222 (77%), Positives = 192/222 (86%)
 Frame = -3

Query: 1040 NSDGSPNNRRRKNNYTQXXXXXXXXXXXXXREDSVRRTVYVSDIDQHITEEHLAALFINC 861
            N   + N+RR+KNN+ Q             +EDSVRRTVYV DID  +TEE LAALFINC
Sbjct: 67   NGSFANNSRRKKNNFNQGKRRLNGRNIRAQQEDSVRRTVYVCDIDHQVTEEQLAALFINC 126

Query: 860  GQVVDCRVCGDPHSVLRFAFIEFADEQGARAALSLAGTMLGYYPVRVLPSKTAILPVNPV 681
            GQV+DCR+CGDP+SVLRFAFIEFADEQGARAALSLAGTMLGYYPVRVLPSKTAILPVNP 
Sbjct: 127  GQVIDCRICGDPNSVLRFAFIEFADEQGARAALSLAGTMLGYYPVRVLPSKTAILPVNPT 186

Query: 680  FLPRSEDEREMCARTVYCTNIDKEVSHTDVKVFFESICGEVSRLRLLGDHVHSTRIAFVE 501
            FLPRSEDEREMCART+YCTNIDK+VS  +V++FFES+CGEVSRLRLLGDHVHSTRIAFVE
Sbjct: 187  FLPRSEDEREMCARTIYCTNIDKKVSQVEVRMFFESLCGEVSRLRLLGDHVHSTRIAFVE 246

Query: 500  FVIAESAIIALNCSGMILGSLPVRVSPSKTPVRPRSPRAMLN 375
            FV+AESAI+ALNCSG I+GSLP+RVSPSKTPVRPR P   ++
Sbjct: 247  FVMAESAILALNCSGAIVGSLPIRVSPSKTPVRPRIPHPTMH 288


>ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vitis vinifera]
          Length = 398

 Score =  342 bits (877), Expect = 9e-92
 Identities = 167/225 (74%), Positives = 191/225 (84%)
 Frame = -3

Query: 1061 GAAGNDFNSDGSPNNRRRKNNYTQXXXXXXXXXXXXXREDSVRRTVYVSDIDQHITEEHL 882
            G+  ++   +G  N RR+KNN+ Q             RE+ +RRTVYVSDIDQ +TEE L
Sbjct: 170  GSETHNNTRNGQVNGRRKKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKL 229

Query: 881  AALFINCGQVVDCRVCGDPHSVLRFAFIEFADEQGARAALSLAGTMLGYYPVRVLPSKTA 702
            AALFI CGQVVDCRVCGDP+SVLRFAF+EF DE+GARAALSLAGTMLGYYPVRVLPSKTA
Sbjct: 230  AALFITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTA 289

Query: 701  ILPVNPVFLPRSEDEREMCARTVYCTNIDKEVSHTDVKVFFESICGEVSRLRLLGDHVHS 522
            I PVNP FLPR+EDEREMCART+YCTNIDK+VS  DVK+FFES+CGEV RLRLLGD+ HS
Sbjct: 290  IAPVNPTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHS 349

Query: 521  TRIAFVEFVIAESAIIALNCSGMILGSLPVRVSPSKTPVRPRSPR 387
            TRIAFVEF++AESAI ALNCSG++LGSLP+RVSPSKTPVRPR+PR
Sbjct: 350  TRIAFVEFIMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPR 394


>ref|XP_003563809.1| PREDICTED: uncharacterized protein LOC100835921 [Brachypodium
            distachyon]
          Length = 351

 Score =  342 bits (876), Expect = 1e-91
 Identities = 174/232 (75%), Positives = 193/232 (83%), Gaps = 3/232 (1%)
 Frame = -3

Query: 1067 LVGAAGNDFNSDGSPN---NRRRKNNYTQXXXXXXXXXXXXXREDSVRRTVYVSDIDQHI 897
            +VG  G D +SDGS N   NRRR+N + Q             REDSVRRTVYVSDIDQH+
Sbjct: 118  VVGGGGRDSSSDGSVNGQPNRRRRNGFNQGRRRMGPRPRRTDREDSVRRTVYVSDIDQHV 177

Query: 896  TEEHLAALFINCGQVVDCRVCGDPHSVLRFAFIEFADEQGARAALSLAGTMLGYYPVRVL 717
            TE+ LA +F NCGQVVDCR+CGDP+SV+RFAFIEFAD+ GARAALSLAGT+LGYYPVRVL
Sbjct: 178  TEQKLAEVFSNCGQVVDCRICGDPNSVMRFAFIEFADDVGARAALSLAGTILGYYPVRVL 237

Query: 716  PSKTAILPVNPVFLPRSEDEREMCARTVYCTNIDKEVSHTDVKVFFESICGEVSRLRLLG 537
            PSKTAILPVNP FLPR+EDE+EM +RTVYCTNIDK V    VK FFE ICGEV+RLRLLG
Sbjct: 238  PSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDVVKKFFEGICGEVARLRLLG 297

Query: 536  DHVHSTRIAFVEFVIAESAIIALNCSGMILGSLPVRVSPSKTPVRPRSPRAM 381
            D+VHST IAFVEFV AE AI+ALNCSGM+LGSLPVRVSPSKTPVRPRSPRAM
Sbjct: 298  DYVHSTCIAFVEFVQAEGAIMALNCSGMLLGSLPVRVSPSKTPVRPRSPRAM 349


>gb|AFK42884.1| unknown [Lotus japonicus]
          Length = 313

 Score =  341 bits (874), Expect = 2e-91
 Identities = 166/212 (78%), Positives = 184/212 (86%)
 Frame = -3

Query: 1022 NNRRRKNNYTQXXXXXXXXXXXXXREDSVRRTVYVSDIDQHITEEHLAALFINCGQVVDC 843
            NNRRR+NN+ Q             REDSVRRTVYVSDIDQH+TEE LAALF  CG V+DC
Sbjct: 97   NNRRRRNNFNQGGRRFTGRVLKAQREDSVRRTVYVSDIDQHVTEERLAALFTTCGSVIDC 156

Query: 842  RVCGDPHSVLRFAFIEFADEQGARAALSLAGTMLGYYPVRVLPSKTAILPVNPVFLPRSE 663
            R+CGDPHSVLRFAF+EFADE GARAAL+L+GT+LGYYPVRVLPSKTAILPVNP FLPRS+
Sbjct: 157  RICGDPHSVLRFAFVEFADEYGARAALNLSGTVLGYYPVRVLPSKTAILPVNPTFLPRSD 216

Query: 662  DEREMCARTVYCTNIDKEVSHTDVKVFFESICGEVSRLRLLGDHVHSTRIAFVEFVIAES 483
            DEREMC+RTVYCTNIDK+VS  +VK FFE  CGEV+R+RLLGDHVHSTRIAFVEF IAES
Sbjct: 217  DEREMCSRTVYCTNIDKKVSQAEVKNFFEISCGEVTRIRLLGDHVHSTRIAFVEFAIAES 276

Query: 482  AIIALNCSGMILGSLPVRVSPSKTPVRPRSPR 387
            AIIAL+CSGM+LG+ PVRVSPSKTPVRPR PR
Sbjct: 277  AIIALSCSGMLLGTQPVRVSPSKTPVRPRVPR 308