BLASTX nr result

ID: Coptis21_contig00000872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000872
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272108.2| PREDICTED: protein CHUP1, chloroplastic [Vit...    91   1e-16
emb|CBI28895.3| unnamed protein product [Vitis vinifera]               91   1e-16
emb|CBI38446.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_003635366.1| PREDICTED: uncharacterized protein LOC100266...    87   2e-15
ref|XP_002305013.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15

>ref|XP_002272108.2| PREDICTED: protein CHUP1, chloroplastic [Vitis vinifera]
          Length = 210

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/53 (79%), Positives = 46/53 (86%)
 Frame = +3

Query: 6   GSKTEKKLKACTKMLWRAFQLAFRVYTFAGGHDDRADMLSRELAQEIENEPHH 164
           GSKT+   KAC KMLW+AFQLAFRVYTFAGG DDRAD L++ELAQEIENEP H
Sbjct: 157 GSKTKGMTKACAKMLWKAFQLAFRVYTFAGGQDDRADNLTKELAQEIENEPEH 209


>emb|CBI28895.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/53 (79%), Positives = 46/53 (86%)
 Frame = +3

Query: 6   GSKTEKKLKACTKMLWRAFQLAFRVYTFAGGHDDRADMLSRELAQEIENEPHH 164
           GSKT+   KAC KMLW+AFQLAFRVYTFAGG DDRAD L++ELAQEIENEP H
Sbjct: 600 GSKTKGMTKACAKMLWKAFQLAFRVYTFAGGQDDRADNLTKELAQEIENEPEH 652


>emb|CBI38446.3| unnamed protein product [Vitis vinifera]
          Length = 713

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/54 (75%), Positives = 46/54 (85%)
 Frame = +3

Query: 3   AGSKTEKKLKACTKMLWRAFQLAFRVYTFAGGHDDRADMLSRELAQEIENEPHH 164
           +GSKTE   K C KMLWRAFQ AFRVYTFAGGHDDRA+ L+RELAQEIE++P H
Sbjct: 659 SGSKTEGPTKGCGKMLWRAFQFAFRVYTFAGGHDDRAEELTRELAQEIESDPRH 712


>ref|XP_003635366.1| PREDICTED: uncharacterized protein LOC100266951 [Vitis vinifera]
          Length = 1206

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/52 (76%), Positives = 45/52 (86%)
 Frame = +3

Query: 3   AGSKTEKKLKACTKMLWRAFQLAFRVYTFAGGHDDRADMLSRELAQEIENEP 158
           +GSKTE   K C KMLWRAFQ AFRVYTFAGGHDDRA+ L+RELAQEIE++P
Sbjct: 723 SGSKTEGPTKGCGKMLWRAFQFAFRVYTFAGGHDDRAEELTRELAQEIESDP 774



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/54 (62%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
 Frame = +3

Query: 6    GSKTEKKLKACT-KMLWRAFQLAFRVYTFAGGHDDRADMLSRELAQEIENEPHH 164
            GSKTE+  K CT K+LW++F  AFRVYTFAGG DDRA+ L+RELA +IE+   H
Sbjct: 1152 GSKTERPTKDCTTKLLWKSFHFAFRVYTFAGGQDDRAEQLTRELALQIESNLQH 1205


>ref|XP_002305013.1| predicted protein [Populus trichocarpa] gi|222847977|gb|EEE85524.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/54 (74%), Positives = 46/54 (85%)
 Frame = +3

Query: 3   AGSKTEKKLKACTKMLWRAFQLAFRVYTFAGGHDDRADMLSRELAQEIENEPHH 164
           +G+KTE +  A  KMLWRAFQ AFRVY+FAGGHDDRADML+RELA EIE +PHH
Sbjct: 735 SGTKTEPR-SAGAKMLWRAFQFAFRVYSFAGGHDDRADMLTRELAHEIETDPHH 787


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