BLASTX nr result
ID: Coptis21_contig00000872
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000872 (238 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272108.2| PREDICTED: protein CHUP1, chloroplastic [Vit... 91 1e-16 emb|CBI28895.3| unnamed protein product [Vitis vinifera] 91 1e-16 emb|CBI38446.3| unnamed protein product [Vitis vinifera] 90 2e-16 ref|XP_003635366.1| PREDICTED: uncharacterized protein LOC100266... 87 2e-15 ref|XP_002305013.1| predicted protein [Populus trichocarpa] gi|2... 85 5e-15 >ref|XP_002272108.2| PREDICTED: protein CHUP1, chloroplastic [Vitis vinifera] Length = 210 Score = 90.9 bits (224), Expect = 1e-16 Identities = 42/53 (79%), Positives = 46/53 (86%) Frame = +3 Query: 6 GSKTEKKLKACTKMLWRAFQLAFRVYTFAGGHDDRADMLSRELAQEIENEPHH 164 GSKT+ KAC KMLW+AFQLAFRVYTFAGG DDRAD L++ELAQEIENEP H Sbjct: 157 GSKTKGMTKACAKMLWKAFQLAFRVYTFAGGQDDRADNLTKELAQEIENEPEH 209 >emb|CBI28895.3| unnamed protein product [Vitis vinifera] Length = 653 Score = 90.9 bits (224), Expect = 1e-16 Identities = 42/53 (79%), Positives = 46/53 (86%) Frame = +3 Query: 6 GSKTEKKLKACTKMLWRAFQLAFRVYTFAGGHDDRADMLSRELAQEIENEPHH 164 GSKT+ KAC KMLW+AFQLAFRVYTFAGG DDRAD L++ELAQEIENEP H Sbjct: 600 GSKTKGMTKACAKMLWKAFQLAFRVYTFAGGQDDRADNLTKELAQEIENEPEH 652 >emb|CBI38446.3| unnamed protein product [Vitis vinifera] Length = 713 Score = 89.7 bits (221), Expect = 2e-16 Identities = 41/54 (75%), Positives = 46/54 (85%) Frame = +3 Query: 3 AGSKTEKKLKACTKMLWRAFQLAFRVYTFAGGHDDRADMLSRELAQEIENEPHH 164 +GSKTE K C KMLWRAFQ AFRVYTFAGGHDDRA+ L+RELAQEIE++P H Sbjct: 659 SGSKTEGPTKGCGKMLWRAFQFAFRVYTFAGGHDDRAEELTRELAQEIESDPRH 712 >ref|XP_003635366.1| PREDICTED: uncharacterized protein LOC100266951 [Vitis vinifera] Length = 1206 Score = 86.7 bits (213), Expect = 2e-15 Identities = 40/52 (76%), Positives = 45/52 (86%) Frame = +3 Query: 3 AGSKTEKKLKACTKMLWRAFQLAFRVYTFAGGHDDRADMLSRELAQEIENEP 158 +GSKTE K C KMLWRAFQ AFRVYTFAGGHDDRA+ L+RELAQEIE++P Sbjct: 723 SGSKTEGPTKGCGKMLWRAFQFAFRVYTFAGGHDDRAEELTRELAQEIESDP 774 Score = 72.0 bits (175), Expect = 5e-11 Identities = 34/54 (62%), Positives = 42/54 (77%), Gaps = 1/54 (1%) Frame = +3 Query: 6 GSKTEKKLKACT-KMLWRAFQLAFRVYTFAGGHDDRADMLSRELAQEIENEPHH 164 GSKTE+ K CT K+LW++F AFRVYTFAGG DDRA+ L+RELA +IE+ H Sbjct: 1152 GSKTERPTKDCTTKLLWKSFHFAFRVYTFAGGQDDRAEQLTRELALQIESNLQH 1205 >ref|XP_002305013.1| predicted protein [Populus trichocarpa] gi|222847977|gb|EEE85524.1| predicted protein [Populus trichocarpa] Length = 788 Score = 85.1 bits (209), Expect = 5e-15 Identities = 40/54 (74%), Positives = 46/54 (85%) Frame = +3 Query: 3 AGSKTEKKLKACTKMLWRAFQLAFRVYTFAGGHDDRADMLSRELAQEIENEPHH 164 +G+KTE + A KMLWRAFQ AFRVY+FAGGHDDRADML+RELA EIE +PHH Sbjct: 735 SGTKTEPR-SAGAKMLWRAFQFAFRVYSFAGGHDDRADMLTRELAHEIETDPHH 787