BLASTX nr result

ID: Coptis21_contig00000864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000864
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596186.1| Elongation factor EF-2 [Medicago truncatula]...   152   2e-35
ref|XP_002310106.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35
ref|XP_002310687.1| predicted protein [Populus trichocarpa] gi|2...   151   6e-35
ref|NP_001046972.1| Os02g0519900 [Oryza sativa Japonica Group] g...   150   8e-35
ref|NP_001052057.1| Os04g0118400 [Oryza sativa Japonica Group] g...   150   8e-35

>ref|XP_003596186.1| Elongation factor EF-2 [Medicago truncatula]
           gi|355485234|gb|AES66437.1| Elongation factor EF-2
           [Medicago truncatula]
          Length = 843

 Score =  152 bits (385), Expect = 2e-35
 Identities = 76/84 (90%), Positives = 80/84 (95%)
 Frame = +3

Query: 3   TRADEAERGISIKSTGVSLRYEMSDESLSAFKGPRVGNEYLINLIDSPGHVDFSSEVTAA 182
           TRADEAERGI+IKSTG+SL YEMSDESL +FKG R GNEYLINLIDSPGHVDFSSEVTAA
Sbjct: 59  TRADEAERGITIKSTGISLYYEMSDESLKSFKGERNGNEYLINLIDSPGHVDFSSEVTAA 118

Query: 183 LRITDGALVVVDCIEGVCVQTETV 254
           LRITDGALVVVDC+EGVCVQTETV
Sbjct: 119 LRITDGALVVVDCVEGVCVQTETV 142


>ref|XP_002310106.1| predicted protein [Populus trichocarpa] gi|222853009|gb|EEE90556.1|
           predicted protein [Populus trichocarpa]
          Length = 843

 Score =  152 bits (384), Expect = 3e-35
 Identities = 77/84 (91%), Positives = 79/84 (94%)
 Frame = +3

Query: 3   TRADEAERGISIKSTGVSLRYEMSDESLSAFKGPRVGNEYLINLIDSPGHVDFSSEVTAA 182
           TRADEAERGI+IKSTG+SL YEMSDESL  FKG R GNEYLINLIDSPGHVDFSSEVTAA
Sbjct: 59  TRADEAERGITIKSTGISLYYEMSDESLKRFKGERHGNEYLINLIDSPGHVDFSSEVTAA 118

Query: 183 LRITDGALVVVDCIEGVCVQTETV 254
           LRITDGALVVVDCIEGVCVQTETV
Sbjct: 119 LRITDGALVVVDCIEGVCVQTETV 142


>ref|XP_002310687.1| predicted protein [Populus trichocarpa] gi|222853590|gb|EEE91137.1|
           predicted protein [Populus trichocarpa]
          Length = 843

 Score =  151 bits (381), Expect = 6e-35
 Identities = 76/84 (90%), Positives = 79/84 (94%)
 Frame = +3

Query: 3   TRADEAERGISIKSTGVSLRYEMSDESLSAFKGPRVGNEYLINLIDSPGHVDFSSEVTAA 182
           TRADEAERGI+IKSTG+SL YEMSDESL  +KG R GNEYLINLIDSPGHVDFSSEVTAA
Sbjct: 59  TRADEAERGITIKSTGISLYYEMSDESLKRYKGERHGNEYLINLIDSPGHVDFSSEVTAA 118

Query: 183 LRITDGALVVVDCIEGVCVQTETV 254
           LRITDGALVVVDCIEGVCVQTETV
Sbjct: 119 LRITDGALVVVDCIEGVCVQTETV 142


>ref|NP_001046972.1| Os02g0519900 [Oryza sativa Japonica Group]
           gi|49387779|dbj|BAD26337.1| putative elongation factor 2
           [Oryza sativa Japonica Group]
           gi|113536503|dbj|BAF08886.1| Os02g0519900 [Oryza sativa
           Japonica Group] gi|119395216|gb|ABL74569.1| elongation
           factor 2 [Oryza sativa Japonica Group]
           gi|125539668|gb|EAY86063.1| hypothetical protein
           OsI_07431 [Oryza sativa Indica Group]
           gi|125582310|gb|EAZ23241.1| hypothetical protein
           OsJ_06933 [Oryza sativa Japonica Group]
          Length = 843

 Score =  150 bits (380), Expect = 8e-35
 Identities = 76/84 (90%), Positives = 79/84 (94%)
 Frame = +3

Query: 3   TRADEAERGISIKSTGVSLRYEMSDESLSAFKGPRVGNEYLINLIDSPGHVDFSSEVTAA 182
           TRADEAERGI+IKSTG+SL YEMSDESL  +KG R GNEYLINLIDSPGHVDFSSEVTAA
Sbjct: 59  TRADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAA 118

Query: 183 LRITDGALVVVDCIEGVCVQTETV 254
           LRITDGALVVVDCIEGVCVQTETV
Sbjct: 119 LRITDGALVVVDCIEGVCVQTETV 142


>ref|NP_001052057.1| Os04g0118400 [Oryza sativa Japonica Group]
           gi|38344860|emb|CAE01286.2| OSJNBa0020P07.3 [Oryza
           sativa Japonica Group] gi|113563628|dbj|BAF13971.1|
           Os04g0118400 [Oryza sativa Japonica Group]
           gi|116308871|emb|CAH66007.1| H0613H07.5 [Oryza sativa
           Indica Group] gi|119395218|gb|ABL74570.1| elongation
           factor [Oryza sativa Japonica Group]
           gi|125589153|gb|EAZ29503.1| hypothetical protein
           OsJ_13577 [Oryza sativa Japonica Group]
           gi|215704910|dbj|BAG94938.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215715300|dbj|BAG95051.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 843

 Score =  150 bits (380), Expect = 8e-35
 Identities = 76/84 (90%), Positives = 79/84 (94%)
 Frame = +3

Query: 3   TRADEAERGISIKSTGVSLRYEMSDESLSAFKGPRVGNEYLINLIDSPGHVDFSSEVTAA 182
           TRADEAERGI+IKSTG+SL YEMSDESL  +KG R GNEYLINLIDSPGHVDFSSEVTAA
Sbjct: 59  TRADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAA 118

Query: 183 LRITDGALVVVDCIEGVCVQTETV 254
           LRITDGALVVVDCIEGVCVQTETV
Sbjct: 119 LRITDGALVVVDCIEGVCVQTETV 142


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