BLASTX nr result

ID: Coptis21_contig00000835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000835
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266597.1| PREDICTED: nascent polypeptide-associated co...   249   6e-64
gb|ABK93224.1| unknown [Populus trichocarpa]                          247   2e-63
dbj|BAF46352.1| alpha chain of nascent polypeptide associated co...   247   2e-63
gb|ABK92784.1| unknown [Populus trichocarpa]                          244   2e-62
gb|ACB32231.1| nascent polypeptide associated complex alpha [Sol...   240   3e-61

>ref|XP_002266597.1| PREDICTED: nascent polypeptide-associated complex subunit
           alpha-like [Vitis vinifera] gi|298205090|emb|CBI40611.3|
           unnamed protein product [Vitis vinifera]
          Length = 202

 Score =  249 bits (635), Expect = 6e-64
 Identities = 144/198 (72%), Positives = 150/198 (75%), Gaps = 2/198 (1%)
 Frame = -1

Query: 637 SEAELLAAHLEQQKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--SGXXXXXXXX 464
           ++ ELLAAHLEQQKI                                G  SG        
Sbjct: 5   TQEELLAAHLEQQKINPDEPVVEEEDDDDDEDDEDDKDEDDVEGEQGGDASGRSKQSRSE 64

Query: 463 XXXXKAMLKLGMKAIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSS 284
               KAMLKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSS
Sbjct: 65  KKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSS 124

Query: 283 QLQTQAAEQFKAPDLSHVISKPESSAMAQDDEDVDETGVEPKDIELVMTQAGVSRSKAVK 104
           QLQTQAAEQFKAPDLS+VI+KPE+S+MAQDDEDVDETGVEPKDIELVMTQAGVSRSKAVK
Sbjct: 125 QLQTQAAEQFKAPDLSNVIAKPEASSMAQDDEDVDETGVEPKDIELVMTQAGVSRSKAVK 184

Query: 103 ALKAADGDIVSAIMELTN 50
           ALKAADGDIVSAIMELTN
Sbjct: 185 ALKAADGDIVSAIMELTN 202


>gb|ABK93224.1| unknown [Populus trichocarpa]
          Length = 205

 Score =  247 bits (631), Expect = 2e-63
 Identities = 129/133 (96%), Positives = 132/133 (99%)
 Frame = -1

Query: 448 AMLKLGMKAIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQ 269
           AMLKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQ
Sbjct: 73  AMLKLGMKTIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQ 132

Query: 268 AAEQFKAPDLSHVISKPESSAMAQDDEDVDETGVEPKDIELVMTQAGVSRSKAVKALKAA 89
           AAEQFKAPDLSHVISKPE+SA+AQDDE+VDETGVEPKDIELVMTQAGVSRSKAVKALKAA
Sbjct: 133 AAEQFKAPDLSHVISKPETSAIAQDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAA 192

Query: 88  DGDIVSAIMELTN 50
           DGDIVSAIMELTN
Sbjct: 193 DGDIVSAIMELTN 205


>dbj|BAF46352.1| alpha chain of nascent polypeptide associated complex [Nicotiana
           benthamiana]
          Length = 201

 Score =  247 bits (631), Expect = 2e-63
 Identities = 141/196 (71%), Positives = 147/196 (75%)
 Frame = -1

Query: 637 SEAELLAAHLEQQKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGXXXXXXXXXX 458
           S+ ELLAAHLEQQKI                                GSG          
Sbjct: 6   SQEELLAAHLEQQKIESEEPIIEDEEDDDDEDDDDDKDDDDAEDLGDGSGRSKQSRSEKK 65

Query: 457 XXKAMLKLGMKAIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQL 278
             KAMLKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSP SDTYVIFGEAKIEDLSSQL
Sbjct: 66  SRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDLSSQL 125

Query: 277 QTQAAEQFKAPDLSHVISKPESSAMAQDDEDVDETGVEPKDIELVMTQAGVSRSKAVKAL 98
           QTQAAEQFKAP+LS+VISKPE S +AQDDEDVD+TGVEPKDIELVMTQAGVSR+KAVKAL
Sbjct: 126 QTQAAEQFKAPNLSNVISKPEPSTVAQDDEDVDDTGVEPKDIELVMTQAGVSRAKAVKAL 185

Query: 97  KAADGDIVSAIMELTN 50
           KAADGDIVSAIMELTN
Sbjct: 186 KAADGDIVSAIMELTN 201


>gb|ABK92784.1| unknown [Populus trichocarpa]
          Length = 204

 Score =  244 bits (622), Expect = 2e-62
 Identities = 127/132 (96%), Positives = 131/132 (99%)
 Frame = -1

Query: 448 AMLKLGMKAIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQ 269
           AMLKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQ
Sbjct: 72  AMLKLGMKTIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQ 131

Query: 268 AAEQFKAPDLSHVISKPESSAMAQDDEDVDETGVEPKDIELVMTQAGVSRSKAVKALKAA 89
           AAEQFKAPDLSHVISKPE+SA+AQDDE+VDETGVEPKDIELVMTQAGVSRSKAVKALKAA
Sbjct: 132 AAEQFKAPDLSHVISKPETSAVAQDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAA 191

Query: 88  DGDIVSAIMELT 53
           DGDIVSAIM+LT
Sbjct: 192 DGDIVSAIMDLT 203


>gb|ACB32231.1| nascent polypeptide associated complex alpha [Solanum chacoense]
          Length = 199

 Score =  240 bits (612), Expect = 3e-61
 Identities = 137/196 (69%), Positives = 146/196 (74%)
 Frame = -1

Query: 637 SEAELLAAHLEQQKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGXXXXXXXXXX 458
           S+ ELLAAHLEQQK+                                 SG          
Sbjct: 5   SQEELLAAHLEQQKLESEVPIIEDEEDDDDDDDDEKDDDDAEELGDG-SGRSKQSRSEKK 63

Query: 457 XXKAMLKLGMKAIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQL 278
             KAMLKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSP SDTYVIFGEAKIEDLSSQL
Sbjct: 64  SRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDLSSQL 123

Query: 277 QTQAAEQFKAPDLSHVISKPESSAMAQDDEDVDETGVEPKDIELVMTQAGVSRSKAVKAL 98
           Q+QAAEQFKAP+LS+VISKPE S +AQDDEDVDETGVEPKDIELVMTQAGVSR+KAVKAL
Sbjct: 124 QSQAAEQFKAPNLSNVISKPEPSTVAQDDEDVDETGVEPKDIELVMTQAGVSRAKAVKAL 183

Query: 97  KAADGDIVSAIMELTN 50
           +AADGDIVSAIME+TN
Sbjct: 184 RAADGDIVSAIMEITN 199


Top