BLASTX nr result

ID: Coptis21_contig00000830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000830
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279379.2| PREDICTED: non-specific lipid-transfer prote...   118   1e-24
ref|XP_003631218.1| PREDICTED: probable non-specific lipid-trans...   115   1e-23
gb|ACM78621.1| non-specific lipid-transfer protein type 2 [Tamar...   111   2e-22
ref|XP_003620406.1| Non-specific lipid-transfer protein [Medicag...   109   5e-22
sp|Q43681.1|NLTP_VIGUN RecName: Full=Probable non-specific lipid...   108   1e-21

>ref|XP_002279379.2| PREDICTED: non-specific lipid-transfer protein 2-like [Vitis
           vinifera]
          Length = 92

 Score =  118 bits (296), Expect = 1e-24
 Identities = 50/92 (54%), Positives = 67/92 (72%)
 Frame = +2

Query: 11  MKVSYLAIFFALFLVLSVANVSIAQTCNPLRLISCAGPITSGTPPNSACCNGLRSQTPCF 190
           MKVSY+A+   L L+L+ A++++A TC+P  L SC G ITS TPP+  CC+ ++ Q PC 
Sbjct: 1   MKVSYIAVCAVLVLLLAEAHITVAVTCSPTELSSCVGAITSSTPPSKLCCSKIKEQKPCL 60

Query: 191 CQYLKNPSLRNYVNSPNARTLLSRCGIPYPNC 286
           CQYLKNP+L+ +VNSPNAR + S CG P P C
Sbjct: 61  CQYLKNPNLKKFVNSPNARKVASTCGTPIPKC 92


>ref|XP_003631218.1| PREDICTED: probable non-specific lipid-transfer protein AKCS9-like
           [Vitis vinifera]
          Length = 92

 Score =  115 bits (287), Expect = 1e-23
 Identities = 48/92 (52%), Positives = 66/92 (71%)
 Frame = +2

Query: 11  MKVSYLAIFFALFLVLSVANVSIAQTCNPLRLISCAGPITSGTPPNSACCNGLRSQTPCF 190
           MK+SY+A+ FAL L+   A VS A TC+P+ L +CA  I S +PP + CC+ L+ Q  C 
Sbjct: 1   MKMSYIAVCFALLLLFGEAQVSTAVTCSPMELSTCANAIISSSPPTATCCSKLKEQRSCL 60

Query: 191 CQYLKNPSLRNYVNSPNARTLLSRCGIPYPNC 286
           CQY+KNP+L+ ++NSPNAR + S CG P+PNC
Sbjct: 61  CQYVKNPNLQKFINSPNARKVASTCGSPFPNC 92


>gb|ACM78621.1| non-specific lipid-transfer protein type 2 [Tamarix hispida]
          Length = 92

 Score =  111 bits (277), Expect = 2e-22
 Identities = 47/92 (51%), Positives = 63/92 (68%)
 Frame = +2

Query: 11  MKVSYLAIFFALFLVLSVANVSIAQTCNPLRLISCAGPITSGTPPNSACCNGLRSQTPCF 190
           MK SY A+F  + L+LS   VS A TC+P +L  C G ITS +PP+  CC+ +R Q PC 
Sbjct: 1   MKASYAAVFAVVMLLLSQTQVSTAVTCSPAQLSPCVGAITSSSPPSGLCCSKVRQQKPCL 60

Query: 191 CQYLKNPSLRNYVNSPNARTLLSRCGIPYPNC 286
           CQY+KNP LR +VN+PNA+ + S+C  P+P C
Sbjct: 61  CQYMKNPYLRKFVNTPNAKKVASQCRTPFPRC 92


>ref|XP_003620406.1| Non-specific lipid-transfer protein [Medicago truncatula]
           gi|217075044|gb|ACJ85882.1| unknown [Medicago
           truncatula] gi|355495421|gb|AES76624.1| Non-specific
           lipid-transfer protein [Medicago truncatula]
          Length = 92

 Score =  109 bits (273), Expect = 5e-22
 Identities = 47/92 (51%), Positives = 65/92 (70%)
 Frame = +2

Query: 11  MKVSYLAIFFALFLVLSVANVSIAQTCNPLRLISCAGPITSGTPPNSACCNGLRSQTPCF 190
           MK S +AI   L L+L    VS+A TC+P++L SC   ITS TPP++ CC+ ++ Q PC 
Sbjct: 1   MKASQIAICTFLVLLLINVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQRPCL 60

Query: 191 CQYLKNPSLRNYVNSPNARTLLSRCGIPYPNC 286
           CQY+KNP+LR +VN+PNAR + + CG P+P C
Sbjct: 61  CQYMKNPNLRKFVNTPNARKVANTCGTPFPRC 92


>sp|Q43681.1|NLTP_VIGUN RecName: Full=Probable non-specific lipid-transfer protein AKCS9;
           Short=LTP; Flags: Precursor gi|499034|emb|CAA56113.1|
           lipid transfer like protein [Vigna unguiculata]
          Length = 99

 Score =  108 bits (270), Expect = 1e-21
 Identities = 50/95 (52%), Positives = 62/95 (65%)
 Frame = +2

Query: 2   KFKMKVSYLAIFFALFLVLSVANVSIAQTCNPLRLISCAGPITSGTPPNSACCNGLRSQT 181
           K KM V    +  ALFL+  V  V+ A TCNP  L SC   IT G+ P+S CC+ L+ Q 
Sbjct: 6   KMKMSVVCAVVVVALFLI-DVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQE 64

Query: 182 PCFCQYLKNPSLRNYVNSPNARTLLSRCGIPYPNC 286
           PC C Y+KNPSL+ YVNSP A+ +LS CG+ YPNC
Sbjct: 65  PCLCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99


Top