BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000810
         (2474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF22733.1| U2AF large subunit [Brachypodium distachyon]            87   2e-14
gb|ABU45195.1| unknown [Petunia integrifolia subsp. inflata]           78   1e-11
ref|XP_003527581.1| PREDICTED: splicing factor U2af large subuni...    77   2e-11
ref|XP_003523474.1| PREDICTED: splicing factor U2af large subuni...    77   2e-11
ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|2...    76   5e-11

>gb|ACF22733.1| U2AF large subunit [Brachypodium distachyon]
          Length = 569

 Score = 87.0 bits (214), Expect = 2e-14
 Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 5/114 (4%)
 Frame = +2

Query: 1253 QAMSRIHVMPQASRHARRLYVGGLPSETSKEAIVELFNCKVK--GSFHSG---VVLDVHV 1417
            QAM++ H+ PQA+RHARR+YVGGLP   +++++   FN  +   G   +G    VL+V++
Sbjct: 219  QAMTQQHIFPQATRHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYI 278

Query: 1418 NQEESYAIVEFFSVVVASQAMKLGTIYLEGAQLVIRRPNDYNARLDTYHVPDLP 1579
            N ++ +A VE  SV  AS AM L  I  EGA + +RRP DYN  L +   P  P
Sbjct: 279  NHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLASALGPSQP 332


>gb|ABU45195.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 506

 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
 Frame = +2

Query: 1283 QASRHARRLYVGGLPSETSKEAIVELFNCKVK--GSFHSG---VVLDVHVNQEESYAIVE 1447
            QA+RHARR+YVGGLPS  +++++   F+  +   G   +G    V+DV++N E+ +A VE
Sbjct: 168  QATRHARRVYVGGLPSSANEQSVATFFSHVMYAIGGNTAGPGDAVIDVYINHEKKFAFVE 227

Query: 1448 FFSVVVASQAMKLGTIYLEGAQLVIRRPNDYNARLDTYHVPDLP 1579
              SV  AS AM L  +  EG  + +RRP+DYNA L     P  P
Sbjct: 228  MRSVEEASNAMALDGVIFEGEPVRVRRPSDYNASLAATLGPSQP 271


>ref|XP_003527581.1| PREDICTED: splicing factor U2af large subunit A-like [Glycine max]
          Length = 605

 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 47/120 (39%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
 Frame = +2

Query: 1253 QAMSRIHVMP------QASRHARRLYVGGLPSETSKEAIVELFN---CKVKGSFHS--GV 1399
            Q  S + VMP      QA+RHARR+YVGGLP   +++++   F+    K+ G+       
Sbjct: 247  QQFSALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAKIGGNTAGPGDA 306

Query: 1400 VLDVHVNQEESYAIVEFFSVVVASQAMKLGTIYLEGAQLVIRRPNDYNARLDTYHVPDLP 1579
            V++V++N ++ +A VE  SV  AS AM L  I  EGA + +RRP DYN  L     P  P
Sbjct: 307  VVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAATLGPSQP 366


>ref|XP_003523474.1| PREDICTED: splicing factor U2af large subunit B-like [Glycine max]
          Length = 600

 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 47/120 (39%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
 Frame = +2

Query: 1253 QAMSRIHVMP------QASRHARRLYVGGLPSETSKEAIVELFN---CKVKGSFHS--GV 1399
            Q  S + VMP      QA+RHARR+YVGGLP   +++++   F+    K+ G+       
Sbjct: 242  QQFSALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAKIGGNTAGPGDA 301

Query: 1400 VLDVHVNQEESYAIVEFFSVVVASQAMKLGTIYLEGAQLVIRRPNDYNARLDTYHVPDLP 1579
            V++V++N ++ +A VE  SV  AS AM L  I  EGA + +RRP DYN  L     P  P
Sbjct: 302  VVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAATLGPSQP 361


>ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|222836904|gb|EEE75297.1|
            predicted protein [Populus trichocarpa]
          Length = 541

 Score = 75.9 bits (185), Expect = 5e-11
 Identities = 48/124 (38%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
 Frame = +2

Query: 1241 LKAEQAMSRIHVMP------QASRHARRLYVGGLPSETSKEAIVELFNCKVK--GSFHSG 1396
            L   Q    + VMP      QA+RHARR+YVGGLP   +++++   F+  +   G   +G
Sbjct: 177  LGTSQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAG 236

Query: 1397 ---VVLDVHVNQEESYAIVEFFSVVVASQAMKLGTIYLEGAQLVIRRPNDYNARLDTYHV 1567
                V++V++N E+ +A VE  SV  AS AM L  I  EGA + +RRP+DYN  L     
Sbjct: 237  PGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLG 296

Query: 1568 PDLP 1579
            P  P
Sbjct: 297  PSQP 300