BLASTX nr result

ID: Coptis21_contig00000794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000794
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285453.1| PREDICTED: probable 3-beta-hydroxysteroid-De...    84   9e-15
gb|ABU95101.1| putative C-8,7 sterol isomerase [Solanum tuberosum]     81   1e-13
gb|ADG02944.1| putative C-8,7 sterol isomerase [Gossypium hirsutum]    75   4e-12
ref|XP_002455347.1| hypothetical protein SORBIDRAFT_03g008980 [S...    75   4e-12
ref|XP_002512695.1| sterol isomerase, putative [Ricinus communis...    74   1e-11

>ref|XP_002285453.1| PREDICTED: probable
           3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
           isoform 2 [Vitis vinifera]
           gi|225435456|ref|XP_002285450.1| PREDICTED: probable
           3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
           isoform 1 [Vitis vinifera] gi|297746323|emb|CBI16379.3|
           unnamed protein product [Vitis vinifera]
          Length = 222

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/62 (64%), Positives = 47/62 (75%)
 Frame = -3

Query: 470 GTAVYFITSFLEGDNFASSPXXXXXXYVFMNSFWVWIPTLIVIRSWKRICTAFQAEAQSK 291
           GTAVYFITS+L+GDNFA+S       YVF N+FWV IP+LIVIR WK+IC AFQ + Q K
Sbjct: 159 GTAVYFITSYLDGDNFAASAYYYYAYYVFANAFWVVIPSLIVIRCWKKICAAFQVQGQQK 218

Query: 290 KK 285
            K
Sbjct: 219 TK 220


>gb|ABU95101.1| putative C-8,7 sterol isomerase [Solanum tuberosum]
          Length = 221

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/63 (58%), Positives = 43/63 (68%)
 Frame = -3

Query: 470 GTAVYFITSFLEGDNFASSPXXXXXXYVFMNSFWVWIPTLIVIRSWKRICTAFQAEAQSK 291
           GTA+YFIT+ LEGDNF++SP      YVF N FWVWIP+LIVI  WK+IC A     Q  
Sbjct: 159 GTAIYFITAVLEGDNFSTSPFYYYAYYVFANHFWVWIPSLIVIHCWKKICAAVNVHEQKT 218

Query: 290 KKR 282
           K R
Sbjct: 219 KTR 221


>gb|ADG02944.1| putative C-8,7 sterol isomerase [Gossypium hirsutum]
          Length = 217

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/62 (56%), Positives = 46/62 (74%)
 Frame = -3

Query: 470 GTAVYFITSFLEGDNFASSPXXXXXXYVFMNSFWVWIPTLIVIRSWKRICTAFQAEAQSK 291
           GT VYFIT++LEGDNF++SP      YV  NSFW+ IP+LI IR WK+I +A Q+++Q K
Sbjct: 154 GTFVYFITAYLEGDNFSASPFYYYAYYVLANSFWLLIPSLIAIRCWKKISSAVQSQSQKK 213

Query: 290 KK 285
            K
Sbjct: 214 NK 215


>ref|XP_002455347.1| hypothetical protein SORBIDRAFT_03g008980 [Sorghum bicolor]
           gi|241927322|gb|EES00467.1| hypothetical protein
           SORBIDRAFT_03g008980 [Sorghum bicolor]
          Length = 218

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/62 (56%), Positives = 42/62 (67%)
 Frame = -3

Query: 470 GTAVYFITSFLEGDNFASSPXXXXXXYVFMNSFWVWIPTLIVIRSWKRICTAFQAEAQSK 291
           G  VYFIT++L+G NF  SP      ++  NSFWVWIPTLI +RSWK IC AF+AE   K
Sbjct: 157 GGLVYFITAYLDGFNFWISPFYFWAYFISANSFWVWIPTLIAMRSWKMICAAFRAEMAKK 216

Query: 290 KK 285
            K
Sbjct: 217 TK 218


>ref|XP_002512695.1| sterol isomerase, putative [Ricinus communis]
           gi|223548656|gb|EEF50147.1| sterol isomerase, putative
           [Ricinus communis]
          Length = 220

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/62 (56%), Positives = 44/62 (70%)
 Frame = -3

Query: 470 GTAVYFITSFLEGDNFASSPXXXXXXYVFMNSFWVWIPTLIVIRSWKRICTAFQAEAQSK 291
           GTAVYF+T +L+G N+ASSP      Y+  N+ WV IP+LI IRSWK+IC AFQ + Q K
Sbjct: 157 GTAVYFLTPYLDGYNYASSPYYHYAYYIGANASWVVIPSLICIRSWKKICAAFQVQGQRK 216

Query: 290 KK 285
            K
Sbjct: 217 TK 218


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