BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000793
         (1250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77919.1| unknown [Picea sitchensis]                             415   e-113
ref|NP_001237424.1| 40S ribosomal protein SA [Glycine max] gi|33...   414   e-113
gb|ABK24517.1| unknown [Picea sitchensis] gi|224285889|gb|ACN406...   413   e-113
gb|ABK26340.1| unknown [Picea sitchensis] gi|224285162|gb|ACN403...   413   e-113
ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group] g...   412   e-112

>gb|ADE77919.1| unknown [Picea sitchensis]
          Length = 330

 Score =  415 bits (1066), Expect = e-113
 Identities = 201/242 (83%), Positives = 221/242 (91%), Gaps = 1/242 (0%)
 Frame = +2

Query: 194 ILSQKEADVQMLLAADAHLGTKNCDFQMDRYVFKRRTDGIFIINLGKTWEKLMLAARVIV 373
           +LSQ+EAD+QM+LAAD HLGTKNCDFQM+RYV+KRR+DGIFIINLGKTWEKL +AARVIV
Sbjct: 6   VLSQREADIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQIAARVIV 65

Query: 374 AIENPQDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQMQTSFSEPRLLILTD 553
           AIENPQDIIVQSARPYGQRAVLKFAQ+TGAH IAGRHTPGTFTNQ+QTSFSEPRLLILTD
Sbjct: 66  AIENPQDIIVQSARPYGQRAVLKFAQFTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTD 125

Query: 554 PRTDHQPIKEAALGNIPTIAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWLLARMVLQMR 733
           PRTDHQPI+EAALGNIPTIAFCDTDSPM+HVDIGIPANNKGKHSIGCLFW+LARMVLQMR
Sbjct: 126 PRTDHQPIREAALGNIPTIAFCDTDSPMKHVDIGIPANNKGKHSIGCLFWMLARMVLQMR 185

Query: 734 GTIAPGKKWDVMVDLFFYREPEEAKEQVEDEHLAIGQEYTAEYTASSGLTSDWPTQ-AEA 910
           GTIAPG+KWDVMVDLFFYREPEEAKE+ E+E      EY   +T  +     WPT+ A+A
Sbjct: 186 GTIAPGRKWDVMVDLFFYREPEEAKEREEEE--VAQAEYVPTFTLGA---EQWPTEVADA 240

Query: 911 QW 916
           QW
Sbjct: 241 QW 242


>ref|NP_001237424.1| 40S ribosomal protein SA [Glycine max]
           gi|3334320|sp|O22518.1|RSSA_SOYBN RecName: Full=40S
           ribosomal protein SA; AltName: Full=p40
           gi|2444420|gb|AAB82659.1| ribosome-associated protein
           p40 [Glycine max]
          Length = 310

 Score =  414 bits (1063), Expect = e-113
 Identities = 202/250 (80%), Positives = 215/250 (86%)
 Frame = +2

Query: 173 ANAPATKILSQKEADVQMLLAADAHLGTKNCDFQMDRYVFKRRTDGIFIINLGKTWEKLM 352
           A A   + LSQKEAD+QM+LAAD HLGTKNCDFQM+RY+FKRR DGI+IINLGKTWEKL 
Sbjct: 7   AAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQ 66

Query: 353 LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQMQTSFSEP 532
           LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQ+QTSFSEP
Sbjct: 67  LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEP 126

Query: 533 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWLLA 712
           RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLA
Sbjct: 127 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 186

Query: 713 RMVLQMRGTIAPGKKWDVMVDLFFYREPEEAKEQVEDEHLAIGQEYTAEYTASSGLTSDW 892
           RMVLQMRGTI PG KWDVMVDLFFYREPEEAK+Q E+E  A+    T     +      W
Sbjct: 187 RMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPAVDYAITDFNAGAIAADGQW 246

Query: 893 PTQAEAQWVD 922
           P   +  W D
Sbjct: 247 PGTIDQSWSD 256


>gb|ABK24517.1| unknown [Picea sitchensis] gi|224285889|gb|ACN40658.1| unknown
           [Picea sitchensis]
          Length = 319

 Score =  413 bits (1062), Expect = e-113
 Identities = 207/243 (85%), Positives = 220/243 (90%), Gaps = 3/243 (1%)
 Frame = +2

Query: 197 LSQKEADVQMLLAADAHLGTKNCDFQMDRYVFKRRTDGIFIINLGKTWEKLMLAARVIVA 376
           LSQKEADVQM+LAAD HLGTKNCDFQM+RYV+KRR+DGIFIINLGKTWEKL LAARVIVA
Sbjct: 8   LSQKEADVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVA 67

Query: 377 IENPQDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQMQTSFSEPRLLILTDP 556
           IENPQDIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQMQTSF+EPRLLILTDP
Sbjct: 68  IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 127

Query: 557 RTDHQPIKEAALGNIPTIAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 736
           RTDHQPI+EAALGNIPTIAFCDTDSPM+HVDIGIPANNKGKHSIGCLFW+LARMVLQMRG
Sbjct: 128 RTDHQPIREAALGNIPTIAFCDTDSPMKHVDIGIPANNKGKHSIGCLFWMLARMVLQMRG 187

Query: 737 TIAPGKKWDVMVDLFFYREPEEAKEQVEDEHLAIGQEYTAEYTASS-GLTSD-WPTQ-AE 907
           TI PG KWD+MVDLFFYREPEEAKE  EDE   +  EYTA+YTA +  L  D W     +
Sbjct: 188 TILPGHKWDIMVDLFFYREPEEAKEH-EDEEAPVA-EYTADYTAPALALPGDQWGADIPD 245

Query: 908 AQW 916
           AQW
Sbjct: 246 AQW 248


>gb|ABK26340.1| unknown [Picea sitchensis] gi|224285162|gb|ACN40308.1| unknown
           [Picea sitchensis]
          Length = 319

 Score =  413 bits (1061), Expect = e-113
 Identities = 206/243 (84%), Positives = 220/243 (90%), Gaps = 3/243 (1%)
 Frame = +2

Query: 197 LSQKEADVQMLLAADAHLGTKNCDFQMDRYVFKRRTDGIFIINLGKTWEKLMLAARVIVA 376
           LSQKEAD+QM+LAAD HLGTKNCDFQM+RYV+KRR+DGIFIINLGKTWEKL LAARVIVA
Sbjct: 8   LSQKEADIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVA 67

Query: 377 IENPQDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQMQTSFSEPRLLILTDP 556
           IENPQDIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQMQTSF+EPRLLILTDP
Sbjct: 68  IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 127

Query: 557 RTDHQPIKEAALGNIPTIAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 736
           RTDHQPI+EAALGNIPTIAFCDTDSPM+HVDIGIPANNKGKHSIGCLFW+LARMVLQMRG
Sbjct: 128 RTDHQPIREAALGNIPTIAFCDTDSPMKHVDIGIPANNKGKHSIGCLFWMLARMVLQMRG 187

Query: 737 TIAPGKKWDVMVDLFFYREPEEAKEQVEDEHLAIGQEYTAEYTASS-GLTSD-WPTQ-AE 907
           TI PG KWD+MVDLFFYREPEEAKE  EDE   +  EYTA+YTA +  L  D W     +
Sbjct: 188 TILPGHKWDIMVDLFFYREPEEAKEH-EDEEAPVA-EYTADYTAPALALPGDQWGADIPD 245

Query: 908 AQW 916
           AQW
Sbjct: 246 AQW 248


>ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group] gi|313103629|pdb|3IZ6|A
           Chain A, Localization Of The Small Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|33146943|dbj|BAC79991.1|
           putative 40S ribosomal protein [Oryza sativa Japonica
           Group] gi|113611813|dbj|BAF22191.1| Os07g0616600 [Oryza
           sativa Japonica Group] gi|125601085|gb|EAZ40661.1|
           hypothetical protein OsJ_25132 [Oryza sativa Japonica
           Group] gi|215678910|dbj|BAG96340.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215734975|dbj|BAG95697.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740977|dbj|BAG97472.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215764959|dbj|BAG86656.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 305

 Score =  412 bits (1058), Expect = e-112
 Identities = 203/247 (82%), Positives = 219/247 (88%), Gaps = 4/247 (1%)
 Frame = +2

Query: 185 ATKILSQKEADVQMLLAADAHLGTKNCDFQMDRYVFKRRTDGIFIINLGKTWEKLMLAAR 364
           A + LSQ+E D+QM+LAAD HLGTKNCDFQM+RYV+KRRTDGI+IINLGKTWEKL LAAR
Sbjct: 8   AARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 67

Query: 365 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQMQTSFSEPRLLI 544
           VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQ+QTSFSEPRLLI
Sbjct: 68  VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLI 127

Query: 545 LTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWLLARMVL 724
           LTDPRTDHQPIKE+ALGNIPTIAFCDTDSPMR+VDIGIPANNKGK SIGCLFWLLARMVL
Sbjct: 128 LTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVL 187

Query: 725 QMRGTIAPGKKWDVMVDLFFYREPEEAKEQVEDEHLAIGQEY--TAEYTASSGLT--SDW 892
           QMRGTI PG KWDVMVDLFFYR+PEEAKEQ E+E   +  +Y   AEY A +  T   +W
Sbjct: 188 QMRGTILPGHKWDVMVDLFFYRDPEEAKEQEEEEAALVAPDYGAVAEYAAPAADTWGGEW 247

Query: 893 PTQAEAQ 913
            T A AQ
Sbjct: 248 GTDAAAQ 254