BLASTX nr result

ID: Coptis21_contig00000792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000792
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ04323.1| hypothetical protein OsI_26464 [Oryza sativa Indi...   139   2e-31
ref|NP_001059976.1| Os07g0558500 [Oryza sativa Japonica Group] g...   139   2e-31
ref|XP_002275686.2| PREDICTED: protein THYLAKOID FORMATION1, chl...   139   2e-31
emb|CBI28372.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_003539891.1| PREDICTED: protein THYLAKOID FORMATION1, chl...   135   3e-30

>gb|EAZ04323.1| hypothetical protein OsI_26464 [Oryza sativa Indica Group]
          Length = 287

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/83 (79%), Positives = 76/83 (91%)
 Frame = -2

Query: 250 FKAYIQALKEDPEKYRADAQKLEEWAKTQTASSLLEFPSKEGEVEVLLKDISERAAGKGS 71
           FKAYI AL EDPE+YRADAQK+EEWA++Q  +SL+EF SK+GE+E +LKDISERA GKGS
Sbjct: 131 FKAYITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSSKDGEIEAILKDISERAQGKGS 190

Query: 70  FSYSRFFAIGLFRLLELANATEP 2
           FSYSRFFA+GLFRLLELANATEP
Sbjct: 191 FSYSRFFAVGLFRLLELANATEP 213


>ref|NP_001059976.1| Os07g0558500 [Oryza sativa Japonica Group]
           gi|75147522|sp|Q84PB7.1|THF1_ORYSJ RecName: Full=Protein
           THYLAKOID FORMATION1, chloroplastic; Flags: Precursor
           gi|29367385|gb|AAO72565.1| inositol phosphatase-like
           protein [Oryza sativa Japonica Group]
           gi|34394010|dbj|BAC84034.1| inositol phosphatase-like
           protein [Oryza sativa Japonica Group]
           gi|113611512|dbj|BAF21890.1| Os07g0558500 [Oryza sativa
           Japonica Group] gi|125600704|gb|EAZ40280.1| hypothetical
           protein OsJ_24722 [Oryza sativa Japonica Group]
           gi|215694285|dbj|BAG89278.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 287

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/83 (79%), Positives = 76/83 (91%)
 Frame = -2

Query: 250 FKAYIQALKEDPEKYRADAQKLEEWAKTQTASSLLEFPSKEGEVEVLLKDISERAAGKGS 71
           FKAYI AL EDPE+YRADAQK+EEWA++Q  +SL+EF SK+GE+E +LKDISERA GKGS
Sbjct: 131 FKAYITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSSKDGEIEAILKDISERAQGKGS 190

Query: 70  FSYSRFFAIGLFRLLELANATEP 2
           FSYSRFFA+GLFRLLELANATEP
Sbjct: 191 FSYSRFFAVGLFRLLELANATEP 213


>ref|XP_002275686.2| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Vitis
           vinifera]
          Length = 299

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/83 (81%), Positives = 77/83 (92%)
 Frame = -2

Query: 250 FKAYIQALKEDPEKYRADAQKLEEWAKTQTASSLLEFPSKEGEVEVLLKDISERAAGKGS 71
           F+ YI+AL+EDPE+YR DAQ LEEWA++QTASSL+EF SKEGEVE +LKDI+ERA GKGS
Sbjct: 141 FQVYIKALREDPEQYRKDAQMLEEWARSQTASSLVEFSSKEGEVEGILKDIAERAGGKGS 200

Query: 70  FSYSRFFAIGLFRLLELANATEP 2
           FSYSRFFAIGLFRLLELANATEP
Sbjct: 201 FSYSRFFAIGLFRLLELANATEP 223


>emb|CBI28372.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/83 (81%), Positives = 77/83 (92%)
 Frame = -2

Query: 250 FKAYIQALKEDPEKYRADAQKLEEWAKTQTASSLLEFPSKEGEVEVLLKDISERAAGKGS 71
           F+ YI+AL+EDPE+YR DAQ LEEWA++QTASSL+EF SKEGEVE +LKDI+ERA GKGS
Sbjct: 85  FQVYIKALREDPEQYRKDAQMLEEWARSQTASSLVEFSSKEGEVEGILKDIAERAGGKGS 144

Query: 70  FSYSRFFAIGLFRLLELANATEP 2
           FSYSRFFAIGLFRLLELANATEP
Sbjct: 145 FSYSRFFAIGLFRLLELANATEP 167


>ref|XP_003539891.1| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic-like
           [Glycine max]
          Length = 291

 Score =  135 bits (341), Expect = 3e-30
 Identities = 66/83 (79%), Positives = 75/83 (90%)
 Frame = -2

Query: 250 FKAYIQALKEDPEKYRADAQKLEEWAKTQTASSLLEFPSKEGEVEVLLKDISERAAGKGS 71
           F+AYIQALKEDPE+YR DA+KLEEWA++Q  +SLLEF S+EGEVE +LKDI+ERA GKG 
Sbjct: 138 FQAYIQALKEDPEQYRVDAKKLEEWARSQNPNSLLEFSSREGEVEGILKDIAERAGGKGD 197

Query: 70  FSYSRFFAIGLFRLLELANATEP 2
           FSYSRFFAIGLFRLLELANA EP
Sbjct: 198 FSYSRFFAIGLFRLLELANAMEP 220


Top