BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000780
         (1470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]              707   0.0  
emb|CBI18223.3| unnamed protein product [Vitis vinifera]              706   0.0  
ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vi...   706   0.0  
ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus ...   706   0.0  
emb|CAN63848.1| hypothetical protein VITISV_039858 [Vitis vinifera]   704   0.0  

>gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]
          Length = 389

 Score =  707 bits (1824), Expect = 0.0
 Identities = 344/388 (88%), Positives = 360/388 (92%)
 Frame = +2

Query: 62   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDANKPCKLTAFLGYKAGMTHIVRDV 241
            MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD NKPCKLTAFLGYKAGMTHIVRDV
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRDV 60

Query: 242  EKPGSKLHKKETCEAVTIIETPPMVIVGVVAYVKTPRGLRTLNTVWAQHLSEEVRRRXXX 421
            EKPGSKLHKKETCEAVTIIETPPMVIVGVV YVKTPRGLR LNTVWAQHLSEE++RR   
Sbjct: 61   EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEELKRRFYK 120

Query: 422  XXXXXXXXXXXXXXXXXESEEGKKDVQAQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKAH 601
                             ES+EGKKD+Q QLEK+KKY  VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFLKYSKKYESDEGKKDIQTQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180

Query: 602  LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 781
            LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 782  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKANQESHSAMT 961
            LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVYKLGKA QESH+A+T
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKLGKAGQESHAAVT 300

Query: 962  EFDRTEKDITPIGGFPHYGVVKEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 1141
            +FDRTEKDITP+GGFPHYGVVK+DYLLIKGCCVGPKKRVVTLRQSLL QTSR+ALEEIKL
Sbjct: 301  DFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLNQTSRVALEEIKL 360

Query: 1142 KFVDTSSKFGHGRFQTTQEKEKFYGRLK 1225
            KF+DTSSKFGHGRFQTTQEK+KFYGRLK
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKQKFYGRLK 388


>emb|CBI18223.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  706 bits (1823), Expect = 0.0
 Identities = 340/389 (87%), Positives = 364/389 (93%)
 Frame = +2

Query: 59   RMSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDANKPCKLTAFLGYKAGMTHIVRD 238
            RMSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPC+LTAFLGYKAGMTHIVR+
Sbjct: 60   RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRE 119

Query: 239  VEKPGSKLHKKETCEAVTIIETPPMVIVGVVAYVKTPRGLRTLNTVWAQHLSEEVRRRXX 418
            VEKPGSKLHKKETCEAVTI+ETPPMVIVGVVAYVKTPRGLR+LNTVWAQHLSEEV+RR  
Sbjct: 120  VEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFY 179

Query: 419  XXXXXXXXXXXXXXXXXXESEEGKKDVQAQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKA 598
                              E+EEGKK +QAQLEKMKKY +VIRVLAHTQIRKMKGLKQKKA
Sbjct: 180  KNWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKA 239

Query: 599  HLMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 778
            HLMEIQVNGGTIAQKVD+AYGFFEKQVPVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVT
Sbjct: 240  HLMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVT 299

Query: 779  RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKANQESHSAM 958
            RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK  QESH+A+
Sbjct: 300  RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTAL 359

Query: 959  TEFDRTEKDITPIGGFPHYGVVKEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 1138
            TEFDRTEKDITP+GGFPHYGVVK+DY++IKGCCVGPKKRVVTLRQSLLKQTSR+ALEEIK
Sbjct: 360  TEFDRTEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIK 419

Query: 1139 LKFVDTSSKFGHGRFQTTQEKEKFYGRLK 1225
            LKF+DTSSKFGHGRFQTTQEK+KFYGR+K
Sbjct: 420  LKFIDTSSKFGHGRFQTTQEKQKFYGRMK 448


>ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vitis vinifera]
          Length = 397

 Score =  706 bits (1823), Expect = 0.0
 Identities = 340/389 (87%), Positives = 364/389 (93%)
 Frame = +2

Query: 59   RMSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDANKPCKLTAFLGYKAGMTHIVRD 238
            RMSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPC+LTAFLGYKAGMTHIVR+
Sbjct: 8    RMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRE 67

Query: 239  VEKPGSKLHKKETCEAVTIIETPPMVIVGVVAYVKTPRGLRTLNTVWAQHLSEEVRRRXX 418
            VEKPGSKLHKKETCEAVTI+ETPPMVIVGVVAYVKTPRGLR+LNTVWAQHLSEEV+RR  
Sbjct: 68   VEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFY 127

Query: 419  XXXXXXXXXXXXXXXXXXESEEGKKDVQAQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKA 598
                              E+EEGKK +QAQLEKMKKY +VIRVLAHTQIRKMKGLKQKKA
Sbjct: 128  KNWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKA 187

Query: 599  HLMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 778
            HLMEIQVNGGTIAQKVD+AYGFFEKQVPVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVT
Sbjct: 188  HLMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVT 247

Query: 779  RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKANQESHSAM 958
            RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK  QESH+A+
Sbjct: 248  RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTAL 307

Query: 959  TEFDRTEKDITPIGGFPHYGVVKEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 1138
            TEFDRTEKDITP+GGFPHYGVVK+DY++IKGCCVGPKKRVVTLRQSLLKQTSR+ALEEIK
Sbjct: 308  TEFDRTEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIK 367

Query: 1139 LKFVDTSSKFGHGRFQTTQEKEKFYGRLK 1225
            LKF+DTSSKFGHGRFQTTQEK+KFYGR+K
Sbjct: 368  LKFIDTSSKFGHGRFQTTQEKQKFYGRMK 396


>ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus communis]
            gi|223536393|gb|EEF38042.1| 60S ribosomal protein L3,
            putative [Ricinus communis]
          Length = 389

 Score =  706 bits (1821), Expect = 0.0
 Identities = 343/388 (88%), Positives = 360/388 (92%)
 Frame = +2

Query: 62   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDANKPCKLTAFLGYKAGMTHIVRDV 241
            MSHRKFEHPRHGSLGFLPRKRASR RGKVKAFP+DD  KPCKLTAFLGYKAGMTHI+R+V
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRASRQRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIMREV 60

Query: 242  EKPGSKLHKKETCEAVTIIETPPMVIVGVVAYVKTPRGLRTLNTVWAQHLSEEVRRRXXX 421
            EKPGSKLHKKETCEAVTIIETPPMVIVGVV YVKTPRGLR+LNTVWAQHLSEEV+RR   
Sbjct: 61   EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 422  XXXXXXXXXXXXXXXXXESEEGKKDVQAQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKAH 601
                             E+EEGKK +QAQLEKMKKY TVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFTKYSRQLETEEGKKSIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180

Query: 602  LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 781
            LMEIQVNGGTIAQKVDFAYGFFEKQVP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 782  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKANQESHSAMT 961
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK  QESH+A+T
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKGGQESHTAIT 300

Query: 962  EFDRTEKDITPIGGFPHYGVVKEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 1141
            E+DRTEKDITPIGGFPHYGVVK+DYL+IKGCCVGPKKRVVTLRQSLLKQTSR+ALEEIKL
Sbjct: 301  EYDRTEKDITPIGGFPHYGVVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKL 360

Query: 1142 KFVDTSSKFGHGRFQTTQEKEKFYGRLK 1225
            KF+DTSSKFGHGRFQTTQEK+KFYGRLK
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKQKFYGRLK 388


>emb|CAN63848.1| hypothetical protein VITISV_039858 [Vitis vinifera]
          Length = 389

 Score =  704 bits (1818), Expect = 0.0
 Identities = 339/388 (87%), Positives = 363/388 (93%)
 Frame = +2

Query: 62   MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDANKPCKLTAFLGYKAGMTHIVRDV 241
            MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFP+DD +KPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1    MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREV 60

Query: 242  EKPGSKLHKKETCEAVTIIETPPMVIVGVVAYVKTPRGLRTLNTVWAQHLSEEVRRRXXX 421
            EKPGSKLHKKETCEAVTI+ETPPMVIVGVVAYVKTPRGLR+LNTVWAQHLSEEV+RR   
Sbjct: 61   EKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 120

Query: 422  XXXXXXXXXXXXXXXXXESEEGKKDVQAQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKAH 601
                             E+EEGKK +QAQLEKMKKY +VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121  NWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAH 180

Query: 602  LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 781
            LMEIQVNGGTIAQKVD+AYGFFEKQVPVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181  LMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240

Query: 782  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKANQESHSAMT 961
            LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK  QESH+A+T
Sbjct: 241  LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTALT 300

Query: 962  EFDRTEKDITPIGGFPHYGVVKEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 1141
            EFDRTEKDITP+GGFPHYGVVK+DY++IKGCCVGPKKRVVTLRQSLLKQTSR+ALEEIKL
Sbjct: 301  EFDRTEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKL 360

Query: 1142 KFVDTSSKFGHGRFQTTQEKEKFYGRLK 1225
            KF+DTSSKFGHGRFQTTQEK+KFYGR+K
Sbjct: 361  KFIDTSSKFGHGRFQTTQEKQKFYGRMK 388