BLASTX nr result

ID: Coptis21_contig00000758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000758
         (1647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]    648   0.0  
emb|CBI35841.3| unnamed protein product [Vitis vinifera]              641   0.0  
ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]      641   0.0  
emb|CAN65009.1| hypothetical protein VITISV_027348 [Vitis vinifera]   639   0.0  
ref|XP_003547800.1| PREDICTED: nucleolysin TIAR-like [Glycine max]    635   e-179

>ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
          Length = 422

 Score =  648 bits (1672), Expect = 0.0
 Identities = 320/401 (79%), Positives = 345/401 (86%), Gaps = 2/401 (0%)
 Frame = -1

Query: 1440 SLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHSQVTEPLLQEVFASTGVLEGC 1261
            SLYHPGLLAPPQIEP PSGNLPPGFD STCRSVYVGNIH+QVTEPLLQEVF+ TG +EGC
Sbjct: 27   SLYHPGLLAPPQIEPYPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSGTGPVEGC 86

Query: 1260 KLIRKDKSSYGFVDYFDRRSAALAILTLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 1081
            KLIRKDKSSYGF+ YFDRRSAALAIL+LNGRHLFGQPIKVNWAYASGQREDTSGH+NIFV
Sbjct: 87   KLIRKDKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFV 146

Query: 1080 GDLAPEVTDATLYACFSAFPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGK 901
            GDL+PEVTDATL+ACFS +PSCSDARVMWDQKTGRSRGFGFVSFRNQQ+AQS+INDLTGK
Sbjct: 147  GDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSSINDLTGK 206

Query: 900  WLGSRQIRCNWATKGAGNMDEKSNSDAKSVVELTSGTSEDGQEAANDDAPENNPQFTTVY 721
            WLGSRQIRCNWATKGAG  +EK NSDAKSVVELT+G+SEDG+E +N DAPENNPQ+TTVY
Sbjct: 207  WLGSRQIRCNWATKGAGGNEEKQNSDAKSVVELTNGSSEDGKETSNSDAPENNPQYTTVY 266

Query: 720  VGNLAPEVTQLDLHRLFHMLGAGVIEEVRTQRDKGFGFVRYSTHAEAAMAIQMSNGRN-L 544
            VGNLAPEVTQLDLHR FH LGAGV+EEVR QRDKGFGFVRYSTHAEAA+AIQM N ++ L
Sbjct: 267  VGNLAPEVTQLDLHRHFHALGAGVMEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSLL 326

Query: 543  CGKPIKCSWGSKXXXXXXXXXXXXXXXXXPF-GMSANDLLAYDRQLALSKMGGAHALMHP 367
            CGKPIKCSWGSK                    G+SA DLLAY+RQLA+SKMGG HALMHP
Sbjct: 327  CGKPIKCSWGSKPTPPGTASNPLPPPAAASLPGLSATDLLAYERQLAISKMGGVHALMHP 386

Query: 366  QGQHAFKXXXXXXXXXXXXXXAIYDGGFQNVAAAQHLMYYQ 244
            QGQH  K              AIYDGGFQNVAAAQ +MYYQ
Sbjct: 387  QGQHHLK-----QAAAIGASQAIYDGGFQNVAAAQQMMYYQ 422


>emb|CBI35841.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  641 bits (1653), Expect = 0.0
 Identities = 320/401 (79%), Positives = 348/401 (86%), Gaps = 2/401 (0%)
 Frame = -1

Query: 1440 SLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHSQVTEPLLQEVFASTGVLEGC 1261
            SLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIH+QV+EPLLQEVFASTG +EGC
Sbjct: 10   SLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGC 69

Query: 1260 KLIRKDKSSYGFVDYFDRRSAALAILTLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 1081
            KL+RK+KSSYGF+ YFDRRSAALAIL+LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV
Sbjct: 70   KLVRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 129

Query: 1080 GDLAPEVTDATLYACFSAFPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGK 901
            GDL+PEVTDATL+ACFS FPSCSDARVMWDQKTGRSRGFGFVSFRNQQ+AQSAIND+TGK
Sbjct: 130  GDLSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDITGK 189

Query: 900  WLGSRQIRCNWATKGAGNMDEKSNSDAKSVVELTSGTSEDGQEAANDDAPENNPQFTTVY 721
            WLGSRQIRCNWATKGAG+ D+K +SDAKSVVELT+G+SEDG+E A ++AP+NNPQ+TTVY
Sbjct: 190  WLGSRQIRCNWATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYTTVY 249

Query: 720  VGNLAPEVTQLDLHRLFHMLGAGVIEEVRTQRDKGFGFVRYSTHAEAAMAIQMSNGRN-L 544
            VGNLAPEVTQLDLHR FH  GAGVIEEVR QRDKGFGFVRY+THAEAA+AIQM N ++ L
Sbjct: 250  VGNLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNTQSIL 309

Query: 543  CGKPIKCSWGSKXXXXXXXXXXXXXXXXXPF-GMSANDLLAYDRQLALSKMGGAHALMHP 367
            CGKPIKCSWGSK                 P  G+SA DLLAY+RQLA+SKMG  HALMHP
Sbjct: 310  CGKPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKMG--HALMHP 367

Query: 366  QGQHAFKXXXXXXXXXXXXXXAIYDGGFQNVAAAQHLMYYQ 244
            QGQH  K              AIYDGGFQNVAAAQ LMYYQ
Sbjct: 368  QGQHPLK-QAAMGMGAAGASQAIYDGGFQNVAAAQQLMYYQ 407


>ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
          Length = 420

 Score =  641 bits (1653), Expect = 0.0
 Identities = 320/401 (79%), Positives = 348/401 (86%), Gaps = 2/401 (0%)
 Frame = -1

Query: 1440 SLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHSQVTEPLLQEVFASTGVLEGC 1261
            SLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIH+QV+EPLLQEVFASTG +EGC
Sbjct: 23   SLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGC 82

Query: 1260 KLIRKDKSSYGFVDYFDRRSAALAILTLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 1081
            KL+RK+KSSYGF+ YFDRRSAALAIL+LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV
Sbjct: 83   KLVRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 142

Query: 1080 GDLAPEVTDATLYACFSAFPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGK 901
            GDL+PEVTDATL+ACFS FPSCSDARVMWDQKTGRSRGFGFVSFRNQQ+AQSAIND+TGK
Sbjct: 143  GDLSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDITGK 202

Query: 900  WLGSRQIRCNWATKGAGNMDEKSNSDAKSVVELTSGTSEDGQEAANDDAPENNPQFTTVY 721
            WLGSRQIRCNWATKGAG+ D+K +SDAKSVVELT+G+SEDG+E A ++AP+NNPQ+TTVY
Sbjct: 203  WLGSRQIRCNWATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYTTVY 262

Query: 720  VGNLAPEVTQLDLHRLFHMLGAGVIEEVRTQRDKGFGFVRYSTHAEAAMAIQMSNGRN-L 544
            VGNLAPEVTQLDLHR FH  GAGVIEEVR QRDKGFGFVRY+THAEAA+AIQM N ++ L
Sbjct: 263  VGNLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNTQSIL 322

Query: 543  CGKPIKCSWGSKXXXXXXXXXXXXXXXXXPF-GMSANDLLAYDRQLALSKMGGAHALMHP 367
            CGKPIKCSWGSK                 P  G+SA DLLAY+RQLA+SKMG  HALMHP
Sbjct: 323  CGKPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKMG--HALMHP 380

Query: 366  QGQHAFKXXXXXXXXXXXXXXAIYDGGFQNVAAAQHLMYYQ 244
            QGQH  K              AIYDGGFQNVAAAQ LMYYQ
Sbjct: 381  QGQHPLK-QAAMGMGAAGASQAIYDGGFQNVAAAQQLMYYQ 420


>emb|CAN65009.1| hypothetical protein VITISV_027348 [Vitis vinifera]
          Length = 420

 Score =  639 bits (1649), Expect = 0.0
 Identities = 320/401 (79%), Positives = 347/401 (86%), Gaps = 2/401 (0%)
 Frame = -1

Query: 1440 SLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHSQVTEPLLQEVFASTGVLEGC 1261
            SLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIH+QV+EPLLQEVFASTG +EGC
Sbjct: 23   SLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGC 82

Query: 1260 KLIRKDKSSYGFVDYFDRRSAALAILTLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 1081
            KL+RK+KSSYGF+ YFDRRSAALAIL+LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV
Sbjct: 83   KLVRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 142

Query: 1080 GDLAPEVTDATLYACFSAFPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGK 901
            GDL+PEVTDATL+ACFS FPSCSDARVMWDQKTGRSRGFGFVSFRNQQ AQSAIND+TGK
Sbjct: 143  GDLSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQVAQSAINDITGK 202

Query: 900  WLGSRQIRCNWATKGAGNMDEKSNSDAKSVVELTSGTSEDGQEAANDDAPENNPQFTTVY 721
            WLGSRQIRCNWATKGAG+ D+K +SDAKSVVELT+G+SEDG+E A ++AP+NNPQ+TTVY
Sbjct: 203  WLGSRQIRCNWATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYTTVY 262

Query: 720  VGNLAPEVTQLDLHRLFHMLGAGVIEEVRTQRDKGFGFVRYSTHAEAAMAIQMSNGRN-L 544
            VGNLAPEVTQLDLHR FH  GAGVIEEVR QRDKGFGFVRY+THAEAA+AIQM N ++ L
Sbjct: 263  VGNLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNTQSIL 322

Query: 543  CGKPIKCSWGSKXXXXXXXXXXXXXXXXXPF-GMSANDLLAYDRQLALSKMGGAHALMHP 367
            CGKPIKCSWGSK                 P  G+SA DLLAY+RQLA+SKMG  HALMHP
Sbjct: 323  CGKPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKMG--HALMHP 380

Query: 366  QGQHAFKXXXXXXXXXXXXXXAIYDGGFQNVAAAQHLMYYQ 244
            QGQH  K              AIYDGGFQNVAAAQ LMYYQ
Sbjct: 381  QGQHPLK-QAAMGMGAAGASQAIYDGGFQNVAAAQQLMYYQ 420


>ref|XP_003547800.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
          Length = 416

 Score =  635 bits (1638), Expect = e-179
 Identities = 317/401 (79%), Positives = 339/401 (84%), Gaps = 2/401 (0%)
 Frame = -1

Query: 1440 SLYHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHSQVTEPLLQEVFASTGVLEGC 1261
            SLYHPGLLAPPQIEPIPSGNLPPGFD STCRSVYVGNIH+QVTEPLLQEVFA TG +E C
Sbjct: 23   SLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFAGTGPVEAC 82

Query: 1260 KLIRKDKSSYGFVDYFDRRSAALAILTLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFV 1081
            KLIRKDKSSYGF+ YFDRRSAALAIL+LNGRHLFGQPIKVNWAYASGQREDTSGH+NIFV
Sbjct: 83   KLIRKDKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFV 142

Query: 1080 GDLAPEVTDATLYACFSAFPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLTGK 901
            GDL+PEVTDATL+ACFS +P+CSDARVMWDQKTGRSRGFGFVSFRNQQ+AQSAINDLTGK
Sbjct: 143  GDLSPEVTDATLFACFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGK 202

Query: 900  WLGSRQIRCNWATKGAGNMDEKSNSDAKSVVELTSGTSEDGQEAANDDAPENNPQFTTVY 721
            WLGSRQIRCNWATKGAG  +EK NSDAKSVVELT G+S DG+E +N DAPENNPQ+TTVY
Sbjct: 203  WLGSRQIRCNWATKGAGGTEEKQNSDAKSVVELTYGSS-DGKETSNSDAPENNPQYTTVY 261

Query: 720  VGNLAPEVTQLDLHRLFHMLGAGVIEEVRTQRDKGFGFVRYSTHAEAAMAIQMSNGRN-L 544
            VGNLAPE TQLDLH  FH LGAGVIEEVR QRDKGFGFVRYSTHAEAA+AIQM N ++ L
Sbjct: 262  VGNLAPEATQLDLHHHFHSLGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSLL 321

Query: 543  CGKPIKCSWGSKXXXXXXXXXXXXXXXXXPF-GMSANDLLAYDRQLALSKMGGAHALMHP 367
            CGK IKCSWGSK                    G+SA DLL Y+RQLA+SKMGG HALMHP
Sbjct: 322  CGKQIKCSWGSKPTPAGTASNPLPPPAAASLPGLSATDLLVYERQLAMSKMGGVHALMHP 381

Query: 366  QGQHAFKXXXXXXXXXXXXXXAIYDGGFQNVAAAQHLMYYQ 244
            QGQH  K              AIYDGGFQNVAAAQ +MYYQ
Sbjct: 382  QGQHPLK------QAAIGASQAIYDGGFQNVAAAQQMMYYQ 416


Top