BLASTX nr result

ID: Coptis21_contig00000743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000743
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77256.1| hypothetical protein VITISV_008352 [Vitis vinifera]    77   2e-17
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]    70   6e-16
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]    76   1e-15
emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]    75   4e-15
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]      72   5e-15

>emb|CAN77256.1| hypothetical protein VITISV_008352 [Vitis vinifera]
          Length = 1365

 Score = 77.0 bits (188), Expect(2) = 2e-17
 Identities = 45/80 (56%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
 Frame = +1

Query: 142  AQSRMKFYADLKRTECYFVVGDWVFLGLQPYRLVTTASQTFPKLSPRFYG---ILE--DS 306
            AQ+RMK   D  R E  FVVGDW++L LQPYR    A +   KLSPRFYG   +LE    
Sbjct: 1211 AQARMKTAYDQGRVEREFVVGDWIYLRLQPYRQNLLALRRSHKLSPRFYGPYLVLERIGL 1270

Query: 307  VAYKLDVSSGC*IHPVFHVS 366
            VAY+LD+  G  IHPVFHVS
Sbjct: 1271 VAYRLDLPPGSKIHPVFHVS 1290



 Score = 37.7 bits (86), Expect(2) = 2e-17
 Identities = 19/44 (43%), Positives = 28/44 (63%)
 Frame = +3

Query: 9    QAVYSRPPPSVSAYLPNTTIVHVVDIALRDRDHT*KILKDHLQK 140
            ++VY R PP++ +Y+P T  V VVD  L+ RD   K L+  LQ+
Sbjct: 1167 RSVYGREPPNLLSYVPGTLKVEVVDNMLQARDKVVKDLRCQLQQ 1210


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score = 70.1 bits (170), Expect(2) = 6e-16
 Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 5/80 (6%)
 Frame = +1

Query: 142  AQSRMKFYADLKRTECYFVVGDWVFLGLQPYRLVTTASQTFPKLSPRFYG---ILE--DS 306
            AQ RMK +AD+K T   F +GD V+L LQPY+  +   +   KLSPRFYG   +LE   +
Sbjct: 1310 AQDRMKKFADIKXTARSFNIGDLVYLRLQPYKQQSVVQRRNLKLSPRFYGPYRVLEKIGT 1369

Query: 307  VAYKLDVSSGC*IHPVFHVS 366
            VAY+L++     IHPVFHVS
Sbjct: 1370 VAYRLELPPEAKIHPVFHVS 1389



 Score = 39.7 bits (91), Expect(2) = 6e-16
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = +3

Query: 6    FQAVYSRPPPSVSAYLPNTTIVHVVDIALRDRDHT*KILKDHLQ 137
            F++VY  PPP +  Y P TT +  V+  L+ RD   +IL+ +LQ
Sbjct: 1265 FESVYGYPPPKLIPYTPGTTQLQEVENTLKTRDEIIRILRTNLQ 1308


>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score = 76.3 bits (186), Expect(2) = 1e-15
 Identities = 44/80 (55%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
 Frame = +1

Query: 142  AQSRMKFYADLKRTECYFVVGDWVFLGLQPYRLVTTASQTFPKLSPRFYGILE-----DS 306
            A +RMK  AD KR E  F VGDWV+L LQPYR  +   +T  KLS R+YG  E       
Sbjct: 1174 ANNRMKQAADKKRREVNFEVGDWVYLRLQPYRQQSVFRRTSHKLSNRYYGPYEIEERIGP 1233

Query: 307  VAYKLDVSSGC*IHPVFHVS 366
            VAYKL +S G  IHPVFHVS
Sbjct: 1234 VAYKLKLSPGSRIHPVFHVS 1253



 Score = 32.3 bits (72), Expect(2) = 1e-15
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +3

Query: 6    FQAVYSRPPPSVSAYLPNTTIVHVVDIALRDRDHT*KILKDHL 134
            FQA+Y RPPP++ +Y   +  +  +D  +  R+   + LK HL
Sbjct: 1129 FQALYGRPPPAIPSYEIGSCPIEELDDQMTARNELLQELKAHL 1171


>emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]
          Length = 1259

 Score = 75.1 bits (183), Expect(2) = 4e-15
 Identities = 43/80 (53%), Positives = 50/80 (62%), Gaps = 5/80 (6%)
 Frame = +1

Query: 142  AQSRMKFYADLKRTECYFVVGDWVFLGLQPYRLVTTASQTFPKLSPRFYGILE-----DS 306
            A +RMK  AD KR E  F VGDWV+L LQPYR  +   +T  KLS R+YG  +       
Sbjct: 1145 ANNRMKQAADKKRREVNFEVGDWVYLRLQPYRQQSVFRRTSHKLSNRYYGPYQIEERIGP 1204

Query: 307  VAYKLDVSSGC*IHPVFHVS 366
            VAYKL +S G  IHPVFHVS
Sbjct: 1205 VAYKLKLSPGSRIHPVFHVS 1224



 Score = 32.0 bits (71), Expect(2) = 4e-15
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +3

Query: 6    FQAVYSRPPPSVSAYLPNTTIVHVVDIALRDRDHT*KILKDHL 134
            FQA+Y  PPP++ +Y   +  +  +D  +  RD   + LK HL
Sbjct: 1100 FQALYGXPPPAIPSYEIGSCPIEELDDQMTARDELLQELKAHL 1142


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score = 71.6 bits (174), Expect(2) = 5e-15
 Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 6/81 (7%)
 Frame = +1

Query: 142  AQSRMKFYADLKRTECYFVVGDWVFLGLQPYRLVTTASQTFP-KLSPRFYGILE-----D 303
            AQ+RMK YAD  R++  F VGD+V+L LQPYR  +  ++  P KLSPRFYG         
Sbjct: 1401 AQNRMKQYADSHRSQREFQVGDFVYLKLQPYRQQSLKTKGVPHKLSPRFYGPFRVTDKVG 1460

Query: 304  SVAYKLDVSSGC*IHPVFHVS 366
            +VAYKL++  G  IH VFHVS
Sbjct: 1461 TVAYKLELPQGTAIHNVFHVS 1481



 Score = 35.0 bits (79), Expect(2) = 5e-15
 Identities = 18/43 (41%), Positives = 25/43 (58%)
 Frame = +3

Query: 6    FQAVYSRPPPSVSAYLPNTTIVHVVDIALRDRDHT*KILKDHL 134
            F+ VY +PPP    YLP  +   VVD +L+ R+    +LK HL
Sbjct: 1356 FEIVYGQPPPVHLPYLPGESSSVVVDRSLQKREELIAMLKFHL 1398


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