BLASTX nr result

ID: Coptis21_contig00000724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000724
         (1997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278119.1| PREDICTED: eukaryotic initiation factor 4A-1...   468   0.0  
emb|CAN61608.1| hypothetical protein VITISV_040122 [Vitis vinifera]   468   0.0  
ref|NP_001242064.1| uncharacterized protein LOC100786735 [Glycin...   465   0.0  
ref|XP_003533770.1| PREDICTED: eukaryotic initiation factor 4A-1...   464   0.0  
ref|XP_002514133.1| dead box ATP-dependent RNA helicase, putativ...   465   0.0  

>ref|XP_002278119.1| PREDICTED: eukaryotic initiation factor 4A-11 [Vitis vinifera]
            gi|296081635|emb|CBI20640.3| unnamed protein product
            [Vitis vinifera]
          Length = 413

 Score =  468 bits (1205), Expect(2) = 0.0
 Identities = 235/241 (97%), Positives = 238/241 (98%)
 Frame = +1

Query: 673  VVVGTPGRVFDMLRRGSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFS 852
            VVVGTPGRVFDMLRR SLRPD IKMFVLDEADEMLSRGFKDQIYDIFQLLPSK+QVGVFS
Sbjct: 161  VVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFS 220

Query: 853  ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 1032
            ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNV+KEEWKLETLCDLYETLAIT
Sbjct: 221  ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAIT 280

Query: 1033 QSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 1212
            QSVIFVNTRRKVDWLTDKMR RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA
Sbjct: 281  QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 340

Query: 1213 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNV 1392
            RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT+DDERMLFDIQRFYNV
Sbjct: 341  RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQRFYNV 400

Query: 1393 V 1395
            V
Sbjct: 401  V 401



 Score =  264 bits (674), Expect(2) = 0.0
 Identities = 132/141 (93%), Positives = 134/141 (95%)
 Frame = +2

Query: 155 MAGLAPEGSQFDGRQYDSKMNDLLTADGETFFTSYDEVYESFDAMNLQENLLRGIYAYGF 334
           MAGLAPEGSQFD RQYDSKMN+LL  DG+ FFTSYDEVYESFDAM LQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDSKMNELLGTDGQDFFTSYDEVYESFDAMGLQENLLRGIYAYGF 60

Query: 335 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYNLVECQALVLAPTREL 514
           EKPSAIQQRGIVPF KGLDVIQQAQSGTGKTATFCSGILQQLDY LVECQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTREL 120

Query: 515 AQQIEKVMRALGDYLGVKVHA 577
           AQQIEKVMRALGDYLGVKVHA
Sbjct: 121 AQQIEKVMRALGDYLGVKVHA 141


>emb|CAN61608.1| hypothetical protein VITISV_040122 [Vitis vinifera]
          Length = 413

 Score =  468 bits (1205), Expect(2) = 0.0
 Identities = 235/241 (97%), Positives = 238/241 (98%)
 Frame = +1

Query: 673  VVVGTPGRVFDMLRRGSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFS 852
            VVVGTPGRVFDMLRR SLRPD IKMFVLDEADEMLSRGFKDQIYDIFQLLPSK+QVGVFS
Sbjct: 161  VVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFS 220

Query: 853  ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 1032
            ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNV+KEEWKLETLCDLYETLAIT
Sbjct: 221  ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAIT 280

Query: 1033 QSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 1212
            QSVIFVNTRRKVDWLTDKMR RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA
Sbjct: 281  QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 340

Query: 1213 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNV 1392
            RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT+DDERMLFDIQRFYNV
Sbjct: 341  RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQRFYNV 400

Query: 1393 V 1395
            V
Sbjct: 401  V 401



 Score =  263 bits (671), Expect(2) = 0.0
 Identities = 131/141 (92%), Positives = 134/141 (95%)
 Frame = +2

Query: 155 MAGLAPEGSQFDGRQYDSKMNDLLTADGETFFTSYDEVYESFDAMNLQENLLRGIYAYGF 334
           MAGLAPEGSQFD RQYDSKMN+LL  DG+ FFTSYDEVY+SFDAM LQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDSKMNELLGTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 335 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYNLVECQALVLAPTREL 514
           EKPSAIQQRGIVPF KGLDVIQQAQSGTGKTATFCSGILQQLDY LVECQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTREL 120

Query: 515 AQQIEKVMRALGDYLGVKVHA 577
           AQQIEKVMRALGDYLGVKVHA
Sbjct: 121 AQQIEKVMRALGDYLGVKVHA 141


>ref|NP_001242064.1| uncharacterized protein LOC100786735 [Glycine max]
            gi|255635856|gb|ACU18275.1| unknown [Glycine max]
          Length = 413

 Score =  465 bits (1196), Expect(2) = 0.0
 Identities = 232/241 (96%), Positives = 238/241 (98%)
 Frame = +1

Query: 673  VVVGTPGRVFDMLRRGSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFS 852
            VVVGTPGRVFDMLRR SLRPD IKMFVLDEADEMLSRGFKDQIYDIFQLLPSK+QVGVFS
Sbjct: 161  VVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFS 220

Query: 853  ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 1032
            ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF+VNVEKEEWKL+TLCDLYETLAIT
Sbjct: 221  ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLDTLCDLYETLAIT 280

Query: 1033 QSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 1212
            QSVIFVNTRRKVDWLTDKMR RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA
Sbjct: 281  QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 340

Query: 1213 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNV 1392
            RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE+MLFDIQ+FYNV
Sbjct: 341  RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDEKMLFDIQKFYNV 400

Query: 1393 V 1395
            +
Sbjct: 401  I 401



 Score =  265 bits (677), Expect(2) = 0.0
 Identities = 129/141 (91%), Positives = 137/141 (97%)
 Frame = +2

Query: 155 MAGLAPEGSQFDGRQYDSKMNDLLTADGETFFTSYDEVYESFDAMNLQENLLRGIYAYGF 334
           MAGLAPEGSQFD RQYD+KMN+LLT+DG+ FFTSYDEVY+SFDAM LQ+NLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDTKMNELLTSDGQDFFTSYDEVYDSFDAMGLQDNLLRGIYAYGF 60

Query: 335 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYNLVECQALVLAPTREL 514
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY++ ECQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSVTECQALVLAPTREL 120

Query: 515 AQQIEKVMRALGDYLGVKVHA 577
           AQQIEKVMRALGDYLGVKVHA
Sbjct: 121 AQQIEKVMRALGDYLGVKVHA 141


>ref|XP_003533770.1| PREDICTED: eukaryotic initiation factor 4A-15-like isoform 1 [Glycine
            max] gi|356530403|ref|XP_003533771.1| PREDICTED:
            eukaryotic initiation factor 4A-15-like isoform 2
            [Glycine max]
          Length = 413

 Score =  464 bits (1194), Expect(2) = 0.0
 Identities = 232/241 (96%), Positives = 238/241 (98%)
 Frame = +1

Query: 673  VVVGTPGRVFDMLRRGSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFS 852
            VVVGTPGRVFDMLRR SLRPD IKMFVLDEADEMLSRGFKDQIYDIFQLLPSK+QVGVFS
Sbjct: 161  VVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFS 220

Query: 853  ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 1032
            ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF+VNVEKEEWKL+TLCDLYETLAIT
Sbjct: 221  ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLDTLCDLYETLAIT 280

Query: 1033 QSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 1212
            QSVIFVNTRRKVDWLTDKMR RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA
Sbjct: 281  QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 340

Query: 1213 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNV 1392
            RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT+DDE+MLFDIQ+FYNV
Sbjct: 341  RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDEKMLFDIQKFYNV 400

Query: 1393 V 1395
            V
Sbjct: 401  V 401



 Score =  265 bits (678), Expect(2) = 0.0
 Identities = 129/141 (91%), Positives = 137/141 (97%)
 Frame = +2

Query: 155 MAGLAPEGSQFDGRQYDSKMNDLLTADGETFFTSYDEVYESFDAMNLQENLLRGIYAYGF 334
           MAG+APEGSQFD RQYD+KMN+LLT+DG+ FFTSYDEVY+SFDAM LQENLLRGIYAYGF
Sbjct: 1   MAGIAPEGSQFDARQYDTKMNELLTSDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 335 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYNLVECQALVLAPTREL 514
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY++ ECQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSVTECQALVLAPTREL 120

Query: 515 AQQIEKVMRALGDYLGVKVHA 577
           AQQIEKVMRALGDYLGVKVHA
Sbjct: 121 AQQIEKVMRALGDYLGVKVHA 141


>ref|XP_002514133.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223546589|gb|EEF48087.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 764

 Score =  465 bits (1196), Expect(2) = 0.0
 Identities = 233/241 (96%), Positives = 237/241 (98%)
 Frame = +1

Query: 673  VVVGTPGRVFDMLRRGSLRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFS 852
            VVVGTPGRVFDMLRR SLRPD IKMFVLDEADEMLSRGFKDQIYDIFQLLPSK+QVGVFS
Sbjct: 512  VVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFS 571

Query: 853  ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 1032
            ATMPPEALEITRKFMNKPV+ILVKRDELTLEGIKQF+VNVEKEEWKLETLCDLYETLAIT
Sbjct: 572  ATMPPEALEITRKFMNKPVKILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 631

Query: 1033 QSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 1212
            QSVIFVNTRRKVDWLTDKMR RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA
Sbjct: 632  QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 691

Query: 1213 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNV 1392
            RGIDVQQVSLVINYDLPTQPENYLHRIGR GRFGRKGVAINFVTRDDERMLFDIQ+FYNV
Sbjct: 692  RGIDVQQVSLVINYDLPTQPENYLHRIGRGGRFGRKGVAINFVTRDDERMLFDIQKFYNV 751

Query: 1393 V 1395
            V
Sbjct: 752  V 752



 Score =  264 bits (675), Expect(2) = 0.0
 Identities = 131/143 (91%), Positives = 136/143 (95%)
 Frame = +2

Query: 149 ADMAGLAPEGSQFDGRQYDSKMNDLLTADGETFFTSYDEVYESFDAMNLQENLLRGIYAY 328
           A MAGLAPEGSQFD + +DSKMN+LLTADGE FFT+YDEVYESFD+M LQENLLRGIYAY
Sbjct: 350 AAMAGLAPEGSQFDAKHFDSKMNELLTADGEDFFTTYDEVYESFDSMGLQENLLRGIYAY 409

Query: 329 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYNLVECQALVLAPTR 508
           GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY LVECQA VLAPTR
Sbjct: 410 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYALVECQAXVLAPTR 469

Query: 509 ELAQQIEKVMRALGDYLGVKVHA 577
           ELAQQIEKVMRALGDYLGVKVHA
Sbjct: 470 ELAQQIEKVMRALGDYLGVKVHA 492


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