BLASTX nr result

ID: Coptis21_contig00000719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000719
         (2464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243...   198   7e-48
ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group] g...   197   9e-48
gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indi...   197   9e-48
ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824...   195   4e-47
gb|AGE46128.1| arginine/serine-rich splicing factor SC31 transcr...   194   1e-46

>ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
           gi|302141951|emb|CBI19154.3| unnamed protein product
           [Vitis vinifera]
          Length = 257

 Score =  198 bits (503), Expect = 7e-48
 Identities = 94/101 (93%), Positives = 99/101 (98%)
 Frame = +3

Query: 354 MSHFGRTGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 533
           MSHFGR+GPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 534 FVRYKYGEEAQKAVERLDGRNVDGRDIMVQFAKYGPNAEPI 656
           FVRYKY +EAQKAVE+LDGRNVDGR+IMVQFAKYGPNAE I
Sbjct: 61  FVRYKYADEAQKAVEKLDGRNVDGREIMVQFAKYGPNAERI 101


>ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
           gi|42408182|dbj|BAD09319.1| putative splicing factor,
           arginine/serine-rich [Oryza sativa Japonica Group]
           gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa
           Japonica Group] gi|215693774|dbj|BAG88973.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215737273|dbj|BAG96202.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 289

 Score =  197 bits (502), Expect = 9e-48
 Identities = 92/101 (91%), Positives = 100/101 (99%)
 Frame = +3

Query: 354 MSHFGRTGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 533
           MSHFGR+GPPDIRDT+SLLVLNI+FRTTADDLFPLFD+YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFA 60

Query: 534 FVRYKYGEEAQKAVERLDGRNVDGRDIMVQFAKYGPNAEPI 656
           FVRYKY EEAQKA++RLDGRNVDGR+IMVQFAKYGPNAEPI
Sbjct: 61  FVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPI 101


>gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
           gi|222640763|gb|EEE68895.1| hypothetical protein
           OsJ_27729 [Oryza sativa Japonica Group]
          Length = 298

 Score =  197 bits (502), Expect = 9e-48
 Identities = 92/101 (91%), Positives = 100/101 (99%)
 Frame = +3

Query: 354 MSHFGRTGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 533
           MSHFGR+GPPDIRDT+SLLVLNI+FRTTADDLFPLFD+YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFA 60

Query: 534 FVRYKYGEEAQKAVERLDGRNVDGRDIMVQFAKYGPNAEPI 656
           FVRYKY EEAQKA++RLDGRNVDGR+IMVQFAKYGPNAEPI
Sbjct: 61  FVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPI 101


>ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
           distachyon]
          Length = 283

 Score =  195 bits (496), Expect = 4e-47
 Identities = 91/101 (90%), Positives = 99/101 (98%)
 Frame = +3

Query: 354 MSHFGRTGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 533
           MSHFGR GPPDIRDT+SLLVLNI+FRTTADDL+PLFD+YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRAGPPDIRDTFSLLVLNISFRTTADDLYPLFDRYGKVVDVFIPRDRRTGDSRGFA 60

Query: 534 FVRYKYGEEAQKAVERLDGRNVDGRDIMVQFAKYGPNAEPI 656
           FVRYKY +EAQKAV+RLDGRNVDGR+IMVQFAKYGPNAEPI
Sbjct: 61  FVRYKYADEAQKAVDRLDGRNVDGRNIMVQFAKYGPNAEPI 101


>gb|AGE46128.1| arginine/serine-rich splicing factor SC31 transcript VI [Sorghum
           bicolor]
          Length = 107

 Score =  194 bits (492), Expect = 1e-46
 Identities = 89/101 (88%), Positives = 100/101 (99%)
 Frame = +3

Query: 354 MSHFGRTGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 533
           MSHFGR+GPPDIRDT+SLLVLNI+FRTTADDL+PLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFA 60

Query: 534 FVRYKYGEEAQKAVERLDGRNVDGRDIMVQFAKYGPNAEPI 656
           FVRYKY +EAQKA++RLDGRNVDGR+IMVQFAKYGPNAEPI
Sbjct: 61  FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPI 101


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