BLASTX nr result

ID: Coptis21_contig00000709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000709
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH47174.1| similar to cytochrome b-c1 complex subunit 9-lik...   100   3e-19
gb|ADB02893.1| ubiquinol-cytochrome C reductase [Jatropha curcas]      99   6e-19
ref|XP_002282670.1| PREDICTED: cytochrome b-c1 complex subunit 9...    99   6e-19
ref|NP_190841.1| ubiquinol-cytochrome c reductase subunit 9 [Ara...    99   6e-19
ref|XP_003554436.1| PREDICTED: cytochrome b-c1 complex subunit 9...    99   1e-18

>emb|CCH47174.1| similar to cytochrome b-c1 complex subunit 9-like [Lupinus
           angustifolius]
          Length = 73

 Score =  100 bits (249), Expect = 3e-19
 Identities = 44/57 (77%), Positives = 52/57 (91%)
 Frame = -1

Query: 556 VYRLVMRRTPIYVTFVLVGAFFGERAVDYGVHKLWERNNIGKRYEDIPVLGTRQAEE 386
           +Y+++MRR  +YVTFV+VGAF GERAVDYGVHK+WERNN+GKRYEDIPVLG R AEE
Sbjct: 17  LYKVLMRRNSVYVTFVIVGAFAGERAVDYGVHKIWERNNVGKRYEDIPVLGQRPAEE 73


>gb|ADB02893.1| ubiquinol-cytochrome C reductase [Jatropha curcas]
          Length = 72

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 44/57 (77%), Positives = 51/57 (89%)
 Frame = -1

Query: 556 VYRLVMRRTPIYVTFVLVGAFFGERAVDYGVHKLWERNNIGKRYEDIPVLGTRQAEE 386
           +YRL+MRR  +YVTFV++GAF GERAVDYGVHKLWE NN+GKRYEDIPVLG R +EE
Sbjct: 16  LYRLIMRRNSVYVTFVILGAFAGERAVDYGVHKLWEYNNVGKRYEDIPVLGQRPSEE 72


>ref|XP_002282670.1| PREDICTED: cytochrome b-c1 complex subunit 9 isoform 1 [Vitis
           vinifera] gi|359481596|ref|XP_003632645.1| PREDICTED:
           cytochrome b-c1 complex subunit 9 isoform 2 [Vitis
           vinifera] gi|297740111|emb|CBI30293.3| unnamed protein
           product [Vitis vinifera]
          Length = 71

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 43/56 (76%), Positives = 51/56 (91%)
 Frame = -1

Query: 556 VYRLVMRRTPIYVTFVLVGAFFGERAVDYGVHKLWERNNIGKRYEDIPVLGTRQAE 389
           +YR++MRRT +Y TFV++GAF GERAVDYGVHKLWERNN+GKRYEDIPVLG R +E
Sbjct: 16  LYRVIMRRTSVYATFVILGAFAGERAVDYGVHKLWERNNVGKRYEDIPVLGQRPSE 71


>ref|NP_190841.1| ubiquinol-cytochrome c reductase subunit 9 [Arabidopsis thaliana]
           gi|297819994|ref|XP_002877880.1| hypothetical protein
           ARALYDRAFT_906650 [Arabidopsis lyrata subsp. lyrata]
           gi|7669947|emb|CAB89234.1| ubiquinol--cytochrome-c
           reductase-like protein [Arabidopsis thaliana]
           gi|15451024|gb|AAK96783.1| Unknown protein [Arabidopsis
           thaliana] gi|23198358|gb|AAN15706.1| Unknown protein
           [Arabidopsis thaliana] gi|297323718|gb|EFH54139.1|
           hypothetical protein ARALYDRAFT_906650 [Arabidopsis
           lyrata subsp. lyrata] gi|332645466|gb|AEE78987.1|
           ubiquinol-cytochrome c reductase subunit 9 [Arabidopsis
           thaliana]
          Length = 72

 Score = 99.4 bits (246), Expect = 6e-19
 Identities = 43/56 (76%), Positives = 49/56 (87%)
 Frame = -1

Query: 553 YRLVMRRTPIYVTFVLVGAFFGERAVDYGVHKLWERNNIGKRYEDIPVLGTRQAEE 386
           Y+L+MRR  +YVTF++ GAFFGERAVDYGVHKLWERNN+GKRYEDI VLG R  EE
Sbjct: 17  YKLIMRRNSVYVTFIIAGAFFGERAVDYGVHKLWERNNVGKRYEDISVLGQRPVEE 72


>ref|XP_003554436.1| PREDICTED: cytochrome b-c1 complex subunit 9-like [Glycine max]
          Length = 71

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 43/56 (76%), Positives = 50/56 (89%)
 Frame = -1

Query: 556 VYRLVMRRTPIYVTFVLVGAFFGERAVDYGVHKLWERNNIGKRYEDIPVLGTRQAE 389
           +Y++VMRR  +YVTFV+ GAF GERAVDYGVHKLWE NN+GKRYEDIPVLG RQ+E
Sbjct: 16  LYKVVMRRNSVYVTFVIAGAFLGERAVDYGVHKLWEANNVGKRYEDIPVLGQRQSE 71


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