BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000703
         (1708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-...   395   e-107
ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|2...   393   e-107
ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-...   388   e-105
ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,...   386   e-105
ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago...   383   e-104

>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
            gi|296088298|emb|CBI36743.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  395 bits (1016), Expect = e-107
 Identities = 217/380 (57%), Positives = 252/380 (66%), Gaps = 14/380 (3%)
 Frame = +3

Query: 75   IITIPSYEEVLSETXXXXXXXXXXXXXXXXXQAFSFIKNTEFYXXXXXXXXXXXXXXX-R 251
            +I IPSY+EVL E+                 QAFSF+K+++ Y                R
Sbjct: 23   VIKIPSYQEVL-ESSQSKTTSSLFTPSPSFSQAFSFVKSSQSYTPPPPATPPPPPPPSSR 81

Query: 252  QTNQPQAXXXXXXXXXXXX-LQNRNAILVSHRQKGNPLLKHIRNVKWVFADIICDYVLGQ 428
            Q  Q +A              Q+RNAILVSHRQKGNPLLKHIRNV+W FADI+CDY+LGQ
Sbjct: 82   QVEQLEAPSSSSSSPSLSRSAQSRNAILVSHRQKGNPLLKHIRNVRWDFADIVCDYLLGQ 141

Query: 429  NSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRXXXXXXXXXXXXKPILEVTKTALLHDC 608
            NSCALYLSLRYHLLHPDYLYYRIRELQKNFKLR            KP+LEVT+TALLHDC
Sbjct: 142  NSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVIKPLLEVTRTALLHDC 201

Query: 609  TLLCAWSLEECGRYLETIKVYENKPADILQGQMDTDYLSRLNHALTAVRRVNKTDVVTLG 788
            TLLCAWSLEECGRYLETIKVYENK ADI+QGQ DTDYLSRL HALT VR VNKTDVVTLG
Sbjct: 202  TLLCAWSLEECGRYLETIKVYENKSADIIQGQTDTDYLSRLTHALTTVRHVNKTDVVTLG 261

Query: 789  SNFGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEPFRRAXXXXXXXXXXXXXXXXXX 968
            S FGSLS IMD+SMEDLARCPGIGE+KVKRLYDTFHEPF+R                   
Sbjct: 262  STFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRV-------VPSCPAVPENP 314

Query: 969  INSLGDDKRAEKVAEVEN------KQNKDEPSLSIKSALNAAFAKYSDKVHKK------K 1112
            +++  +     +V EVEN      K+ K EP L++KSAL+AAFA+YS+K+ K+      K
Sbjct: 315  VHNNAEPSSVNEVVEVENDVEDASKRRKKEPELTVKSALSAAFAQYSEKIGKRNNRPQGK 374

Query: 1113 TAAEKGIKPSVDSNKEKENK 1172
               EKG  P   +  +  ++
Sbjct: 375  KHEEKGHAPETKAENKPSDE 394


>ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|222838142|gb|EEE76507.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  393 bits (1010), Expect = e-107
 Identities = 215/380 (56%), Positives = 251/380 (66%), Gaps = 10/380 (2%)
 Frame = +3

Query: 75   IITIPSYEEVLSETXXXXXXXXXXXXXXXXX---QAFSFIKNTEFYXXXXXXXXXXXXXX 245
            +I IPSY+EV+  +                    QAFSFIKN+EFY              
Sbjct: 22   LIQIPSYQEVIESSQVKPTQTQESSLFKPSQTFSQAFSFIKNSEFYSPPPPPPSKSEHGP 81

Query: 246  XRQTNQPQAXXXXXXXXXXXXLQNRNAILVSHRQKGNPLLKHIRNVKWVFADIICDYVLG 425
               ++  Q              Q+RNAILVSHRQKGNPLLKHIRNVKW FAD++CDY+LG
Sbjct: 82   SMASSSVQNN------------QSRNAILVSHRQKGNPLLKHIRNVKWAFADVVCDYLLG 129

Query: 426  QNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRXXXXXXXXXXXXKPILEVTKTALLHD 605
            Q+SCALYLSLRYHLLHPDYLYYRIRELQKN KLR            KP+LEVTKTALLHD
Sbjct: 130  QSSCALYLSLRYHLLHPDYLYYRIRELQKNCKLRVVLCHVDVEDVVKPLLEVTKTALLHD 189

Query: 606  CTLLCAWSLEECGRYLETIKVYENKPADILQGQMDTDYLSRLNHALTAVRRVNKTDVVTL 785
            CTLLCAWSLEECGRYLETIK+YENKPAD++QGQMDTDY SRL+HALT VRRVNKTDVVTL
Sbjct: 190  CTLLCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYSSRLHHALTTVRRVNKTDVVTL 249

Query: 786  GSNFGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEPFRRAXXXXXXXXXXXXXXXXX 965
            GS FGSLS IMD+SMEDLARCPGIGE+KVKRLYDTFHEPF+R                  
Sbjct: 250  GSTFGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRV-------VSSHPVVPQT 302

Query: 966  XINSLGDDKRAEKVAEVE------NKQNKDEPSLSIKSALNAAFAK-YSDKVHKKKTAAE 1124
             +    +    ++VAE+E      NK  K EP L++KSAL++AFAK  ++K+  KK   E
Sbjct: 303  PVQKDTEPSSVDEVAEMEMEEANANKHRKKEPELTVKSALSSAFAKCATNKLGNKKFQRE 362

Query: 1125 KGIKPSVDSNKEKENKRLKG 1184
            K  + S   + E E ++  G
Sbjct: 363  KVGETSTAIDSEAETRKTSG 382


>ref|XP_003535349.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
          Length = 398

 Score =  388 bits (996), Expect = e-105
 Identities = 207/379 (54%), Positives = 249/379 (65%), Gaps = 15/379 (3%)
 Frame = +3

Query: 75   IITIPSYEEVLSETXXXXXXXXXXXXXXXXXQAFSFIKNTEFYXXXXXXXXXXXXXXXRQ 254
            +I IPSY+EV+  +                 +AF+F+K+++FY                 
Sbjct: 20   VIRIPSYQEVVESSQAKSTPSSLFVPSQTFSEAFAFVKSSDFYSPPPKSRETGQSDAPSS 79

Query: 255  TNQPQAXXXXXXXXXXXXLQNRNAILVSHRQ-----KGNPLLKHIRNVKWVFADIICDYV 419
            T+ P               QNRN+ILVSHRQ     KGNPLLKHIRNV+W FAD++CDY+
Sbjct: 80   TSTPSPATAAASSTIPSS-QNRNSILVSHRQCIILQKGNPLLKHIRNVRWAFADVVCDYM 138

Query: 420  LGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRXXXXXXXXXXXXKPILEVTKTALL 599
            LGQ+SCALYLSLRYHLLHPDYLYYRIRELQKNFKLR            KP+LEVTKTA+L
Sbjct: 139  LGQSSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRVVLCHVDVEDVIKPLLEVTKTAML 198

Query: 600  HDCTLLCAWSLEECGRYLETIKVYENKPADILQGQMDTDYLSRLNHALTAVRRVNKTDVV 779
            HDCTLLC WSLEECGRYLETIKVYENKPADI+QGQMDTDYLSRL H+LT VR VNKTDVV
Sbjct: 199  HDCTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTDYLSRLTHSLTTVRHVNKTDVV 258

Query: 780  TLGSNFGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEPFRR----------AXXXXX 929
            TLG+ FGSLS IM +SMEDLARCPGIGE+KVKRL+DTFHEPF+R                
Sbjct: 259  TLGTTFGSLSNIMGASMEDLARCPGIGERKVKRLFDTFHEPFKRVESSRQAIPETSVQNK 318

Query: 930  XXXXXXXXXXXXXINSLGDDKRAEKVAEVENKQNKDEPSLSIKSALNAAFAKYSDKVHKK 1109
                          +SL +DK+ +   E  +K+ K EP +++KSAL+AAFAKYS +V K+
Sbjct: 319  PASPESSIRNKAESSSLIEDKQED--TEDVSKRRKKEPEVTVKSALSAAFAKYSGRVGKR 376

Query: 1110 KTAAEKGIKPSVDSNKEKE 1166
            K+ ++   K     +KE E
Sbjct: 377  KSTSQVEEKEESIISKESE 395


>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
            communis] gi|223548305|gb|EEF49796.1| excision repair
            cross-complementing 1 ercc1, putative [Ricinus communis]
          Length = 392

 Score =  386 bits (992), Expect = e-105
 Identities = 213/384 (55%), Positives = 250/384 (65%), Gaps = 10/384 (2%)
 Frame = +3

Query: 75   IITIPSYEEVLSETXXXXXXXXXXXXXXXXXQAFSFIKNTEFYXXXXXXXXXXXXXXXRQ 254
            +I IPSY+EV+ E+                 QAFSFIK++EFY                Q
Sbjct: 23   VIQIPSYQEVI-ESSQNPKTESLFKPSQTFSQAFSFIKDSEFYTPPPQSSAVSNNANSIQ 81

Query: 255  TNQPQAXXXXXXXXXXXXLQNRNAILVSHRQKGNPLLKHIRNVKWVFADIICDYVLGQNS 434
            T Q                  RN+ILVSHRQKGNPLLKHIRNV+W FAD++CDY+LGQN 
Sbjct: 82   TTQSVPSPSQSVALTGNY---RNSILVSHRQKGNPLLKHIRNVRWAFADVVCDYLLGQNC 138

Query: 435  CALYLSLRYHLLHPDYLYYRIRELQKNFKLRXXXXXXXXXXXXKPILEVTKTALLHDCTL 614
            C+LYLSLRYHLLHPDYLYYRIRELQKN+KLR            KP+LEVTKTALLHDCTL
Sbjct: 139  CSLYLSLRYHLLHPDYLYYRIRELQKNYKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTL 198

Query: 615  LCAWSLEECGRYLETIKVYENKPADILQGQMDTDYLSRLNHALTAVRRVNKTDVVTLGSN 794
            LCAWSLEECGRYLETIK+YENKPAD++QGQMDTDYLSRL HALT +R VNKTDVVTLGS 
Sbjct: 199  LCAWSLEECGRYLETIKMYENKPADLIQGQMDTDYLSRLTHALTTIRHVNKTDVVTLGST 258

Query: 795  FGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEPFRRAXXXXXXXXXXXXXXXXXXIN 974
            FGSLS IMD+SMEDLARCPGIGE+KVKRLYDTFHEPF+R                     
Sbjct: 259  FGSLSNIMDASMEDLARCPGIGERKVKRLYDTFHEPFKRVVSSHPAVPE----------T 308

Query: 975  SLGDDKRA--EKVAEV------ENKQNKDEPSLSIKSALNAAFAKYSDKVHKK--KTAAE 1124
            S  D + A  ++V EV      E+K  K EP L++KSAL+AAF+KY++   K+  K+  E
Sbjct: 309  SQKDSEPALVDEVTEVGKGEYDESKWRKKEPELTVKSALSAAFSKYANTFVKRTDKSEGE 368

Query: 1125 KGIKPSVDSNKEKENKRLKGGDGN 1196
               + S       +N+    G G+
Sbjct: 369  NAGETSCSVETGTDNRNPGEGAGS 392


>ref|XP_003591075.1| DNA excision repair protein ERCC-1 [Medicago truncatula]
            gi|355480123|gb|AES61326.1| DNA excision repair protein
            ERCC-1 [Medicago truncatula]
          Length = 401

 Score =  383 bits (983), Expect = e-104
 Identities = 202/366 (55%), Positives = 239/366 (65%), Gaps = 16/366 (4%)
 Frame = +3

Query: 75   IITIPSYEEVLSETXXXXXXXXXXXXXXXXXQAFSFIKNTEFYXXXXXXXXXXXXXXXRQ 254
            +I IPSY+EV+  +                 QAF+F+K++EFY                 
Sbjct: 19   VIRIPSYQEVIESSQTKSTPPSLFVPSQTFSQAFAFVKSSEFYSPPPSLPKENAPSNASS 78

Query: 255  --------TNQPQAXXXXXXXXXXXXLQNRNAILVSHRQKGNPLLKHIRNVKWVFADIIC 410
                    TN   A             QNRNAILVS+RQKGNPLLKHIRNV+W FAD++C
Sbjct: 79   STPSTSSATNNAPAASPNLPNSNSQPTQNRNAILVSNRQKGNPLLKHIRNVRWTFADVVC 138

Query: 411  DYVLGQNSCALYLSLRYHLLHPDYLYYRIRELQKNFKLRXXXXXXXXXXXXKPILEVTKT 590
            D++LGQ+SCALYLSLRYHLLHPDYLY+RIRELQKNFKLR            KP+LEVTKT
Sbjct: 139  DFLLGQSSCALYLSLRYHLLHPDYLYHRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKT 198

Query: 591  ALLHDCTLLCAWSLEECGRYLETIKVYENKPADILQGQMDTDYLSRLNHALTAVRRVNKT 770
            ALLHDCTLLC WSLEECGRYLETIKVYENKPADI+QGQMDTDYLSRL HALT VR VNKT
Sbjct: 199  ALLHDCTLLCGWSLEECGRYLETIKVYENKPADIIQGQMDTDYLSRLTHALTTVRHVNKT 258

Query: 771  DVVTLGSNFGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEPFRRA-----XXXXXXX 935
            DVVTLG+NFGSLS IM +SMEDLARCPGIGE+KVKRL+DTFHEPF+R             
Sbjct: 259  DVVTLGTNFGSLSNIMGASMEDLARCPGIGERKVKRLFDTFHEPFKRVESSRQAIPETSV 318

Query: 936  XXXXXXXXXXXINSLGDDKRAE---KVAEVENKQNKDEPSLSIKSALNAAFAKYSDKVHK 1106
                       IN+       E   K A+  +K+ K EP  +++SAL+ AFAK S++  K
Sbjct: 319  QNQPTSQDTSVINNTESSSSLEDIHKDADSASKRKKKEPEFTVRSALSVAFAKLSERAGK 378

Query: 1107 KKTAAE 1124
            +  +++
Sbjct: 379  RNISSK 384