BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000695
         (1742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...   602   e-169
emb|CBI15710.3| unnamed protein product [Vitis vinifera]              595   e-167
ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [...   595   e-167
ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|2...   585   e-164
ref|XP_003526941.1| PREDICTED: RNA pseudourine synthase 7-like [...   575   e-161

>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis vinifera]
            gi|359491114|ref|XP_002280549.2| PREDICTED: RNA
            pseudourine synthase 7-like isoform 1 [Vitis vinifera]
          Length = 386

 Score =  602 bits (1552), Expect = e-169
 Identities = 285/374 (76%), Positives = 323/374 (86%), Gaps = 1/374 (0%)
 Frame = +1

Query: 94   DMEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFAQEFKGRPY 273
            +MEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLF +EFKGRPY
Sbjct: 10   EMEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPY 69

Query: 274  DYYVSAVECGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMALDLSILHKESEVVTVC 453
            DYYV+AV+ GRIQVDGEMVPVSY+V+SSQKISHF+HRHEPPV+ALD+S+L KE +V+T+C
Sbjct: 70   DYYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTIC 129

Query: 454  KPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARSAAKADLFRQQ 633
            KPASVPVHPCGQYRKNTVVGILQAEH LAPLFP+HRLDRLVSGLLILARSA+KAD FRQQ
Sbjct: 130  KPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQ 189

Query: 634  IEAGMVQKQYIAKVIGVFPKAE-VVNANVDYNAREGRSSAEEEKCPGDIHPKGKSACTKF 810
            IEAGMVQKQYIAKV GVFP  E VVN NV+YNAREGRS+ E   C G+   KGKSACTKF
Sbjct: 190  IEAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVEVGNCCGNTPLKGKSACTKF 249

Query: 811  TRISTNGTYSIVLCEPVTGRTHQIRVHLKYAGHPIANDALYLHDVVATRSTVEVTAEKEA 990
            TRISTNGT+SIVLCEP+TGRTHQIRVHL+Y GHPIAND LYL +    RST  ++A++ A
Sbjct: 250  TRISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADRAA 309

Query: 991  MLNSDHSTFQFPNNGQSDESEESSSKNFSIDPMCTNCPDLVPKGYGKDEEGLWLHCARYS 1170
              +        P +   +  +++S+ +FSIDPMCTNCP+L PKGY +DEEGLWLHC RY 
Sbjct: 310  ANSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYC 369

Query: 1171 GPGWVYECPYPDWA 1212
            GP WVYECP+P+WA
Sbjct: 370  GPDWVYECPHPEWA 383


>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  595 bits (1534), Expect = e-167
 Identities = 284/373 (76%), Positives = 321/373 (86%), Gaps = 1/373 (0%)
 Frame = +1

Query: 97   MEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFAQEFKGRPYD 276
            MEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLF +EFKGRPYD
Sbjct: 1    MEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYD 60

Query: 277  YYVSAVECGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMALDLSILHKESEVVTVCK 456
            YYV+AV+ GRIQVDGEMVPVSY+V+SSQKISHF+HRHEPPV+ALD+S+L KE +V+T+CK
Sbjct: 61   YYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTICK 120

Query: 457  PASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARSAAKADLFRQQI 636
            PASVPVHPCGQYRKNTVVGILQAEH LAPLFP+HRLDRLVSGLLILARSA+KAD FRQQI
Sbjct: 121  PASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQI 180

Query: 637  EAGMVQKQYIAKVIGVFPKAE-VVNANVDYNAREGRSSAEEEKCPGDIHPKGKSACTKFT 813
            EAGMVQKQYIAKV GVFP  E VVN NV+YNAREGRS+     C G+   KGKSACTKFT
Sbjct: 181  EAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTV--GNCCGNTPLKGKSACTKFT 238

Query: 814  RISTNGTYSIVLCEPVTGRTHQIRVHLKYAGHPIANDALYLHDVVATRSTVEVTAEKEAM 993
            RISTNGT+SIVLCEP+TGRTHQIRVHL+Y GHPIAND LYL +    RST  ++A++ A 
Sbjct: 239  RISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADRAAA 298

Query: 994  LNSDHSTFQFPNNGQSDESEESSSKNFSIDPMCTNCPDLVPKGYGKDEEGLWLHCARYSG 1173
             +        P +   +  +++S+ +FSIDPMCTNCP+L PKGY +DEEGLWLHC RY G
Sbjct: 299  NSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCG 358

Query: 1174 PGWVYECPYPDWA 1212
            P WVYECP+P+WA
Sbjct: 359  PDWVYECPHPEWA 371


>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 385

 Score =  595 bits (1534), Expect = e-167
 Identities = 286/374 (76%), Positives = 325/374 (86%), Gaps = 1/374 (0%)
 Frame = +1

Query: 94   DMEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFAQEFKGRPY 273
            DMEIVWQTPANPPE+HDYIFR+G+RHVRPYYFEFISH KNRWAGKTIVDLFA+EFKGRPY
Sbjct: 12   DMEIVWQTPANPPEKHDYIFRDGRRHVRPYYFEFISHAKNRWAGKTIVDLFAEEFKGRPY 71

Query: 274  DYYVSAVECGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMALDLSILHKESEVVTVC 453
            DYYVSAV+CGRIQVDGE VPVSY+VKSSQKISHFLHRHEPPV A D+ +L+K+ +VVTV 
Sbjct: 72   DYYVSAVKCGRIQVDGETVPVSYIVKSSQKISHFLHRHEPPVTAWDIPVLYKDPDVVTVY 131

Query: 454  KPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARSAAKADLFRQQ 633
            KPA+VPVHPCGQYRKNTVVGILQAEH+LAPLFPVHRLDRLVSGLLILAR+A KADLFRQ+
Sbjct: 132  KPATVPVHPCGQYRKNTVVGILQAEHNLAPLFPVHRLDRLVSGLLILARNALKADLFRQE 191

Query: 634  IEAGMVQKQYIAKVIGVFPKAE-VVNANVDYNAREGRSSAEEEKCPGDIHPKGKSACTKF 810
            IEAGMVQKQY+AKV+GVFP+ E VV  N++YNAREGRS+AE      D  PKGK+ACTKF
Sbjct: 192  IEAGMVQKQYVAKVVGVFPEDEQVVGVNINYNAREGRSTAEVGNSCVDSPPKGKTACTKF 251

Query: 811  TRISTNGTYSIVLCEPVTGRTHQIRVHLKYAGHPIANDALYLHDVVATRSTVEVTAEKEA 990
            TRISTNGT+SIVLC+P+TGRTHQIRVHL+Y GHPIAND LYL +  A+RS   ++A++ A
Sbjct: 252  TRISTNGTHSIVLCKPITGRTHQIRVHLQYTGHPIANDFLYLSEHAASRSAEGMSADRAA 311

Query: 991  MLNSDHSTFQFPNNGQSDESEESSSKNFSIDPMCTNCPDLVPKGYGKDEEGLWLHCARYS 1170
              +S   T   P +  SD  EE+S ++FSIDPMCTNCP+L PKGY   EE LWLHC +YS
Sbjct: 312  CSSSYCVT---PQDFCSDTHEENSVQDFSIDPMCTNCPNLAPKGYDVYEECLWLHCVQYS 368

Query: 1171 GPGWVYECPYPDWA 1212
            GPGWVYECPYPDWA
Sbjct: 369  GPGWVYECPYPDWA 382


>ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|222868725|gb|EEF05856.1|
            predicted protein [Populus trichocarpa]
          Length = 388

 Score =  585 bits (1507), Expect = e-164
 Identities = 279/373 (74%), Positives = 318/373 (85%), Gaps = 1/373 (0%)
 Frame = +1

Query: 97   MEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFAQEFKGRPYD 276
            MEIVWQTPANPPE+HDYIFR+G+RHVRPY+FEFISHVKNRWAGKTIVDLFA+EFKGRPYD
Sbjct: 16   MEIVWQTPANPPEKHDYIFRDGRRHVRPYHFEFISHVKNRWAGKTIVDLFAEEFKGRPYD 75

Query: 277  YYVSAVECGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMALDLSILHKESEVVTVCK 456
            YYVSAV+CGRIQVDGEMVPVSY+VKSSQKISHF+HRHEPPVMA D+ IL KE +VVTV K
Sbjct: 76   YYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFVHRHEPPVMAWDVPILDKEDDVVTVWK 135

Query: 457  PASVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARSAAKADLFRQQI 636
            PA+VPVHPCGQYRKNTVVG+LQAEH LAPLFPVHRLDRLVSGLLILAR+A +ADLFRQ+I
Sbjct: 136  PATVPVHPCGQYRKNTVVGVLQAEHGLAPLFPVHRLDRLVSGLLILARNATRADLFRQEI 195

Query: 637  EAGMVQKQYIAKVIGVFPKAE-VVNANVDYNAREGRSSAEEEKCPGDIHPKGKSACTKFT 813
            EAG VQKQY+AKVIGVFP+ E +V+ NV+YNAREGRS+ E          KGK+ACTKFT
Sbjct: 196  EAGKVQKQYVAKVIGVFPEDEQIVDVNVNYNAREGRSTVEVGNSCDGSPIKGKTACTKFT 255

Query: 814  RISTNGTYSIVLCEPVTGRTHQIRVHLKYAGHPIANDALYLHDVVATRSTVEVTAEKEAM 993
            RI TNG +SIVLC+P+TGRTHQIRVHL+Y GHPIAND LYL + V  RS+  V A++ A 
Sbjct: 256  RIGTNGIHSIVLCKPITGRTHQIRVHLQYTGHPIANDILYLSENVTNRSSEGVNADRAA- 314

Query: 994  LNSDHSTFQFPNNGQSDESEESSSKNFSIDPMCTNCPDLVPKGYGKDEEGLWLHCARYSG 1173
                 +    P N  SD+ E+S+ ++F IDPMCTNCP+LVPKGY   EEGLWLHC +YSG
Sbjct: 315  --HSPNNCLVPENNSSDKYEDSTEEDFDIDPMCTNCPNLVPKGYDGHEEGLWLHCVQYSG 372

Query: 1174 PGWVYECPYPDWA 1212
             GWVY+CPYPDWA
Sbjct: 373  SGWVYQCPYPDWA 385


>ref|XP_003526941.1| PREDICTED: RNA pseudourine synthase 7-like [Glycine max]
          Length = 381

 Score =  575 bits (1483), Expect = e-161
 Identities = 277/371 (74%), Positives = 315/371 (84%), Gaps = 1/371 (0%)
 Frame = +1

Query: 103  IVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFAQEFKGRPYDYY 282
            IVWQTPANPP  +DY+FRNG R+VRPYYFEFI+HVKNRWAGKTIVDLFA+EFKGRPY+YY
Sbjct: 14   IVWQTPANPPHPNDYVFRNGIRYVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYY 73

Query: 283  VSAVECGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMALDLSILHKESEVVTVCKPA 462
            VSAV+CGRIQVDGEMVPVSY+VKSSQKISHFLHRHEPPVMA ++ +L K+ +V+TVCKPA
Sbjct: 74   VSAVKCGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMACEVPVLQKDIDVLTVCKPA 133

Query: 463  SVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARSAAKADLFRQQIEA 642
            SVPVHPCGQYRKNTVVGILQAEH L PLFPVHRLDRLVSGLLILAR+AAKAD+FRQQIEA
Sbjct: 134  SVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLILARNAAKADIFRQQIEA 193

Query: 643  GMVQKQYIAKVIGVFPKAEV-VNANVDYNAREGRSSAEEEKCPGDIHPKGKSACTKFTRI 819
            G+V KQYIAKV G FP+ EV V+AN+DYNAREGRS+AE          KGK+A TKFTRI
Sbjct: 194  GLVHKQYIAKVGGEFPEDEVIVDANIDYNAREGRSTAEVRG-----SAKGKAASTKFTRI 248

Query: 820  STNGTYSIVLCEPVTGRTHQIRVHLKYAGHPIANDALYLHDVVATRSTVEVTAEKEAMLN 999
            STNGT SIVLCEP+TGRTHQIRVHL+Y+GHPIAND LY+ +    RS   ++A++ A ++
Sbjct: 249  STNGTQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDRSVKGLSADRSARIS 308

Query: 1000 SDHSTFQFPNNGQSDESEESSSKNFSIDPMCTNCPDLVPKGYGKDEEGLWLHCARYSGPG 1179
                T  F N    +E EE+S+ +F IDPMCTNCP+L PKGY  DEEGLWLHC RYSGPG
Sbjct: 309  GVSLTSNF-NEKVLNECEENSNGDFGIDPMCTNCPNLAPKGYDSDEEGLWLHCIRYSGPG 367

Query: 1180 WVYECPYPDWA 1212
            W YECPYPDWA
Sbjct: 368  WTYECPYPDWA 378