BLASTX nr result

ID: Coptis21_contig00000686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000686
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78649.1| hypothetical protein VITISV_036363 [Vitis vinifera]    58   7e-07

>emb|CAN78649.1| hypothetical protein VITISV_036363 [Vitis vinifera]
          Length = 358

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 37/89 (41%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
 Frame = +2

Query: 2   VVTYICRLELVGVVTCICRLELAGAVTCTCRQVEXXXXXXVVETYTCILVEEVTCTCKRX 181
           VV  IC  ++VGV  C C+L + G   CTC+ VE      VVET TC +V   TCTCK  
Sbjct: 37  VVAGICTCKVVGVGICTCKLVVVG--XCTCKLVE-----EVVETCTCKVVVVETCTCK-- 87

Query: 182 XXXXXXXXXXTCTC--ILVEEGTCTCRQV 262
                     TC C  ++V  G CTC+ V
Sbjct: 88  -----VVVVETCICKVVMVVVGXCTCKLV 111


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