BLASTX nr result

ID: Coptis21_contig00000683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000683
         (1561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278756.2| PREDICTED: elongation factor 1-gamma-like [V...   635   e-180
ref|XP_002264400.1| PREDICTED: elongation factor 1-gamma-like [V...   622   e-176
emb|CAN75785.1| hypothetical protein VITISV_021574 [Vitis vinifera]   618   e-174
gb|ACA50518.1| elongation factor 1-gamma [Oryza sativa Japonica ...   613   e-173
ref|NP_001046317.1| Os02g0220500 [Oryza sativa Japonica Group] g...   612   e-173

>ref|XP_002278756.2| PREDICTED: elongation factor 1-gamma-like [Vitis vinifera]
          Length = 424

 Score =  635 bits (1638), Expect = e-180
 Identities = 316/424 (74%), Positives = 337/424 (79%)
 Frame = -1

Query: 1504 MALILHTADKNTNAYKALIAAEYAGVKVELVKNYVYGVSNKTPEFLKMNPIGKVPVLETP 1325
            MAL+LH  + N NA+KALIAAEY+GVKVELVKN+  GVSNK+PEFLKMNPIGKVPVLETP
Sbjct: 1    MALVLHAGNTNKNAFKALIAAEYSGVKVELVKNFEMGVSNKSPEFLKMNPIGKVPVLETP 60

Query: 1324 DGAVFESNAIARYVTRLKEGNPLYGSSLIEYGQIEQWIDFSSNEIDANMRRWLYPRYGFG 1145
            DG VFESNAIARYVTRLK  NPLYGS+LIEY  IEQWIDF S EIDAN+ RW  PR GF 
Sbjct: 61   DGPVFESNAIARYVTRLKADNPLYGSTLIEYAHIEQWIDFGSLEIDANILRWFIPRIGFA 120

Query: 1144 VYIRPVEEAAIEALKRGLGALNAHLASTTFLVGHLVTLADIIMTCNLSAGFTLGMTKSFT 965
            VY+ P EEAAI ALKR LGALN HLAS T+LVGH VTLADIIMTCNL  GF+  MTKSFT
Sbjct: 121  VYLPPAEEAAISALKRALGALNTHLASNTYLVGHSVTLADIIMTCNLVMGFSRVMTKSFT 180

Query: 964  SEFPHVERYFWTMANQPNFHKVLGDVKQIESVPPVQSEKKPAQXXXXXXXXXXXXXXXXX 785
            SEFPHVERYFWTM NQPNF K+LG+VKQ ESVPPVQS KKP+Q                 
Sbjct: 181  SEFPHVERYFWTMVNQPNFRKILGEVKQAESVPPVQSAKKPSQPKEPKHKDEPKKEAKKE 240

Query: 784  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTMILDDWKRLYSNTKTNFREVAIKGF 605
                                            PS M+LDDWKRLYSNTKTNFREVAIKGF
Sbjct: 241  AKKEPVKPKVAEAAEEEEAPKPKPKNPLDLLPPSKMVLDDWKRLYSNTKTNFREVAIKGF 300

Query: 604  WDMYDPEGYSLWFCDYKYNNENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFK 425
            WDMYDPEGYSLWFCDYKYN+ENTVSFVTLNKV GFLQRMDLARKYAFGKML++GSEAPFK
Sbjct: 301  WDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVTGFLQRMDLARKYAFGKMLIVGSEAPFK 360

Query: 424  VKGLWLFRGPEIPQFVMDECYDMELYEWTKVDISDETQKERVSQMIEDQEPFEGEALLDA 245
            VKGLWLFRG EIPQFV+DECYDMELYEW KVD+SDE QKERV+QMIEDQEPFEGEALLDA
Sbjct: 361  VKGLWLFRGQEIPQFVIDECYDMELYEWKKVDLSDEAQKERVNQMIEDQEPFEGEALLDA 420

Query: 244  KCFK 233
            KCFK
Sbjct: 421  KCFK 424


>ref|XP_002264400.1| PREDICTED: elongation factor 1-gamma-like [Vitis vinifera]
          Length = 423

 Score =  622 bits (1604), Expect = e-176
 Identities = 315/424 (74%), Positives = 332/424 (78%)
 Frame = -1

Query: 1504 MALILHTADKNTNAYKALIAAEYAGVKVELVKNYVYGVSNKTPEFLKMNPIGKVPVLETP 1325
            MAL+LH    N NAYK LIAAEY+G+KVELV+N+  GVSNKTPEFLKMNPIGKVPVLETP
Sbjct: 1    MALVLHAGKTNKNAYKTLIAAEYSGIKVELVQNFEMGVSNKTPEFLKMNPIGKVPVLETP 60

Query: 1324 DGAVFESNAIARYVTRLKEGNPLYGSSLIEYGQIEQWIDFSSNEIDANMRRWLYPRYGFG 1145
            DG VFESNAIARYVTRLK  NPLYGSS IEYG IEQWIDF+S EIDAN+  W  PR G  
Sbjct: 61   DGPVFESNAIARYVTRLKADNPLYGSSPIEYGHIEQWIDFASLEIDANIGHWFRPRIGRA 120

Query: 1144 VYIRPVEEAAIEALKRGLGALNAHLASTTFLVGHLVTLADIIMTCNLSAGFTLGMTKSFT 965
            VY+ P EEAAI ALKR LGALN HLAS TFLVGH VTLADI+MTCNL  GF+  MTKSFT
Sbjct: 121  VYLPPFEEAAIAALKRALGALNTHLASNTFLVGHSVTLADIVMTCNLYMGFSKLMTKSFT 180

Query: 964  SEFPHVERYFWTMANQPNFHKVLGDVKQIESVPPVQSEKKPAQXXXXXXXXXXXXXXXXX 785
            SEFPHVERYFWTM NQPNF K+LG+VKQ  SVPPV S KKPA                  
Sbjct: 181  SEFPHVERYFWTMVNQPNFSKILGEVKQTASVPPVSSAKKPA-LPKEHAKPKHKDEPKKE 239

Query: 784  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTMILDDWKRLYSNTKTNFREVAIKGF 605
                                            PS MILD+WKRLYSNTKTNFREVAIKGF
Sbjct: 240  VKKEPAKPKEAPVGEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGF 299

Query: 604  WDMYDPEGYSLWFCDYKYNNENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFK 425
            WDMYDPEGYSLWFCDYKYN+ENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFK
Sbjct: 300  WDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFK 359

Query: 424  VKGLWLFRGPEIPQFVMDECYDMELYEWTKVDISDETQKERVSQMIEDQEPFEGEALLDA 245
            VKGLWLFRG EIPQF++DECYDMELYEW KVDISDE QKERV+QMIEDQEPFEGEALLDA
Sbjct: 360  VKGLWLFRGQEIPQFIIDECYDMELYEWKKVDISDEAQKERVNQMIEDQEPFEGEALLDA 419

Query: 244  KCFK 233
            KCFK
Sbjct: 420  KCFK 423


>emb|CAN75785.1| hypothetical protein VITISV_021574 [Vitis vinifera]
          Length = 423

 Score =  618 bits (1594), Expect = e-174
 Identities = 313/424 (73%), Positives = 330/424 (77%)
 Frame = -1

Query: 1504 MALILHTADKNTNAYKALIAAEYAGVKVELVKNYVYGVSNKTPEFLKMNPIGKVPVLETP 1325
            MAL+LH    N NAYK LIAAEY+G+KVEL +N+  GVSNKTPEFLKMNPIGKVPVLETP
Sbjct: 1    MALVLHAGKTNKNAYKTLIAAEYSGIKVELXQNFEMGVSNKTPEFLKMNPIGKVPVLETP 60

Query: 1324 DGAVFESNAIARYVTRLKEGNPLYGSSLIEYGQIEQWIDFSSNEIDANMRRWLYPRYGFG 1145
            DG VFESNAIARYVTRLK  NPLYGSS IEYG IEQWIDF+S EIDAN+  W  PR G  
Sbjct: 61   DGPVFESNAIARYVTRLKADNPLYGSSPIEYGHIEQWIDFASLEIDANIGHWFRPRMGRA 120

Query: 1144 VYIRPVEEAAIEALKRGLGALNAHLASTTFLVGHLVTLADIIMTCNLSAGFTLGMTKSFT 965
            VY+ P EEAAI ALKR LGALN HLAS TFLVGH VTLADI+MTCNL  GF+  MTKSFT
Sbjct: 121  VYLPPFEEAAIAALKRALGALNTHLASNTFLVGHSVTLADIVMTCNLYMGFSKLMTKSFT 180

Query: 964  SEFPHVERYFWTMANQPNFHKVLGDVKQIESVPPVQSEKKPAQXXXXXXXXXXXXXXXXX 785
            SEFPHVERYFWTM NQPNF K+LG+VKQ  SVPPV S KKPA                  
Sbjct: 181  SEFPHVERYFWTMVNQPNFSKILGEVKQTASVPPVSSAKKPA-LPKEHVKPKHKDEPKKE 239

Query: 784  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTMILDDWKRLYSNTKTNFREVAIKGF 605
                                            PS MILD+WKRLYSNTKTNF EVAIKGF
Sbjct: 240  VKKEPAKPKEAPVGEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFHEVAIKGF 299

Query: 604  WDMYDPEGYSLWFCDYKYNNENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFK 425
            WDMYDPEGYSLWFCDYKYN+ENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFK
Sbjct: 300  WDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFK 359

Query: 424  VKGLWLFRGPEIPQFVMDECYDMELYEWTKVDISDETQKERVSQMIEDQEPFEGEALLDA 245
            VKGLWLFRG EIPQF++DECYDMELYEW KVDISDE QKERV+QMIEDQEPFEGEALLDA
Sbjct: 360  VKGLWLFRGQEIPQFIIDECYDMELYEWKKVDISDEAQKERVNQMIEDQEPFEGEALLDA 419

Query: 244  KCFK 233
            KCFK
Sbjct: 420  KCFK 423


>gb|ACA50518.1| elongation factor 1-gamma [Oryza sativa Japonica Group]
          Length = 414

 Score =  613 bits (1581), Expect = e-173
 Identities = 310/424 (73%), Positives = 328/424 (77%)
 Frame = -1

Query: 1504 MALILHTADKNTNAYKALIAAEYAGVKVELVKNYVYGVSNKTPEFLKMNPIGKVPVLETP 1325
            MAL+LH    N NA+KALIAAEY+GVKVELVKN+  GVSNKTPEFLKMNPIGK+PVLETP
Sbjct: 1    MALVLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETP 60

Query: 1324 DGAVFESNAIARYVTRLKEGNPLYGSSLIEYGQIEQWIDFSSNEIDANMRRWLYPRYGFG 1145
            DG VFESNAIARYVTR K  NPLYGSSLIEY  IEQW DFS+ E+DAN+ +WLYPR G  
Sbjct: 61   DGPVFESNAIARYVTRSKADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKWLYPRLGIA 120

Query: 1144 VYIRPVEEAAIEALKRGLGALNAHLASTTFLVGHLVTLADIIMTCNLSAGFTLGMTKSFT 965
             Y+   EEAAI ALKR LGALN HLAS T+LVGH VTLADI+MTCNL  GF   MTKSFT
Sbjct: 121  PYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKSFT 180

Query: 964  SEFPHVERYFWTMANQPNFHKVLGDVKQIESVPPVQSEKKPAQXXXXXXXXXXXXXXXXX 785
            SEFPHVERYFWTM NQPNF KVLGDVKQ ESVPPVQ +  P +                 
Sbjct: 181  SEFPHVERYFWTMVNQPNFKKVLGDVKQAESVPPVQKKAPPPK----------EQKPKEA 230

Query: 784  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTMILDDWKRLYSNTKTNFREVAIKGF 605
                                            PS MILD+WKRLYSNTKTNFREVAIKGF
Sbjct: 231  KKEAPKPKAVEKPEEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGF 290

Query: 604  WDMYDPEGYSLWFCDYKYNNENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFK 425
            WDMYDPEGYSLWFCDYKYN+ENTVSFVT+NKVGGFLQRMDL RKYAFGKMLVIGSE PFK
Sbjct: 291  WDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSEPPFK 350

Query: 424  VKGLWLFRGPEIPQFVMDECYDMELYEWTKVDISDETQKERVSQMIEDQEPFEGEALLDA 245
            VKGLWLFRGPEIP+FVMDE YDMELYEWTKVDISDE QKERVS MIED EPFEGEALLDA
Sbjct: 351  VKGLWLFRGPEIPKFVMDEVYDMELYEWTKVDISDEAQKERVSAMIEDLEPFEGEALLDA 410

Query: 244  KCFK 233
            KCFK
Sbjct: 411  KCFK 414


>ref|NP_001046317.1| Os02g0220500 [Oryza sativa Japonica Group]
            gi|46806490|dbj|BAD17614.1| putative elongation factor
            1-gamma [Oryza sativa Japonica Group]
            gi|113535848|dbj|BAF08231.1| Os02g0220500 [Oryza sativa
            Japonica Group] gi|218190329|gb|EEC72756.1| hypothetical
            protein OsI_06401 [Oryza sativa Indica Group]
            gi|222622439|gb|EEE56571.1| hypothetical protein
            OsJ_05922 [Oryza sativa Japonica Group]
          Length = 414

 Score =  612 bits (1578), Expect = e-173
 Identities = 309/424 (72%), Positives = 328/424 (77%)
 Frame = -1

Query: 1504 MALILHTADKNTNAYKALIAAEYAGVKVELVKNYVYGVSNKTPEFLKMNPIGKVPVLETP 1325
            MAL+LH    N NA+KALIAAEY+GVKVELVKN+  GVSNKTPEFLKMNPIGK+PVLETP
Sbjct: 1    MALVLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETP 60

Query: 1324 DGAVFESNAIARYVTRLKEGNPLYGSSLIEYGQIEQWIDFSSNEIDANMRRWLYPRYGFG 1145
            DG VFESNAIARYVTR K  NPLYGSSLIEY  IEQW DFS+ E+DAN+ +WLYPR G  
Sbjct: 61   DGPVFESNAIARYVTRSKADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKWLYPRLGIA 120

Query: 1144 VYIRPVEEAAIEALKRGLGALNAHLASTTFLVGHLVTLADIIMTCNLSAGFTLGMTKSFT 965
             Y+   EEAAI ALKR LGALN HLAS T+LVGH VTLADI+MTCNL  GF   MTKSFT
Sbjct: 121  PYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVMTCNLYMGFARIMTKSFT 180

Query: 964  SEFPHVERYFWTMANQPNFHKVLGDVKQIESVPPVQSEKKPAQXXXXXXXXXXXXXXXXX 785
            SEFPHVERYFWTM NQPNF KVLGDVKQ ESVPPVQ +  P +                 
Sbjct: 181  SEFPHVERYFWTMVNQPNFKKVLGDVKQAESVPPVQKKAPPPK----------EQKPKEA 230

Query: 784  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTMILDDWKRLYSNTKTNFREVAIKGF 605
                                            PS MILD+WKRLYSNTKTNFREVAIKGF
Sbjct: 231  KKEAPKPKAVEKPEEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGF 290

Query: 604  WDMYDPEGYSLWFCDYKYNNENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPFK 425
            WDMYDPEGYSLWFCDYKYN+ENTVSFVT+NKVGGFLQRMDL RKYAFGKMLVIGSE PFK
Sbjct: 291  WDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSEPPFK 350

Query: 424  VKGLWLFRGPEIPQFVMDECYDMELYEWTKVDISDETQKERVSQMIEDQEPFEGEALLDA 245
            VKGLWLFRGPEIP+FVMDE YDMELYEWTKVDISDE QKERVS MIED EPFEGE+LLDA
Sbjct: 351  VKGLWLFRGPEIPKFVMDEVYDMELYEWTKVDISDEAQKERVSAMIEDLEPFEGESLLDA 410

Query: 244  KCFK 233
            KCFK
Sbjct: 411  KCFK 414


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