BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000677
         (3410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...  1834   0.0  
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...  1776   0.0  
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...  1767   0.0  
ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|2...  1763   0.0  
ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III s...  1720   0.0  

>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score = 1834 bits (4750), Expect = 0.0
 Identities = 898/1130 (79%), Positives = 1013/1130 (89%), Gaps = 6/1130 (0%)
 Frame = -1

Query: 3410 IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFIETGIKKVVHANNIITSIVDPGLYLKYTD 3231
            +K AVDKF LLPEFLKVRGLVKQHLDSFNYF++T IKK+V AN+ I S VDP +YL++ D
Sbjct: 15   VKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSSVDPSIYLRFKD 74

Query: 3230 VRIGDPSIKLDHAVKQLTPHMCRLSDITYAASILVDIEYTTGAGVNNLKRKVERKNVEIG 3051
            VRIG+PSI +D   ++L PH CRLSD+TYAA ILV+IEY TG+ V   K +VE+ +V IG
Sbjct: 75   VRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQ--KTRVEKNDVVIG 132

Query: 3050 RLPIMLRSHKCILYGKDEAELAKLRECPLDPGGYFVVKGTEKVVLIQEQLSKNRIIIDSD 2871
            R+PIMLRS  C+LY KDEAELA+L ECPLDPGGYFVVKGTEKV+LIQEQLSKNRIIID+D
Sbjct: 133  RMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDTD 192

Query: 2870 RKGRLMAXXXXXXXXXXXXTNLIMDKEKIYLELNAFEKVVPIMVVMKAMGMESDQEVVQM 2691
            +KG + A            T ++M+KEKI+L+LN F   +PIM+VMKAMGMESDQEVVQM
Sbjct: 193  KKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMGMESDQEVVQM 252

Query: 2690 LGRDPRYATLLLPSIQECVKENVHTQQQALEFLDKRVRKF-LYNSNVSQEGRALIVLRDV 2514
            +GR+PRY+ LLLPS++EC    ++TQQQALEFL+++V+K   YN ++ +EGR + +LRD 
Sbjct: 253  VGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLEKEGRGMAILRDT 312

Query: 2513 FIANVPVHQHNFRPKCMYVAVMLRRMMEAYLNKDAMDDKDYVGNKRLELSGQMISLLFED 2334
            FIANVPV Q+NFRPKC+YVAVMLRRMM+A LNKDAMDDKDYVGNKRLELSGQ+ISLLFED
Sbjct: 313  FIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQLISLLFED 372

Query: 2333 LFKTANSDIKKRVDAVLAK--RSTQFDF---LQYIKGDIITRGLENSMATGNWDLKRFKM 2169
            LFKT  S++KK +DA+LAK  RS++FDF   L++I  D IT GLE +++TGNWD+KRF+M
Sbjct: 373  LFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLSTGNWDVKRFRM 432

Query: 2168 HRKGMTQVLARLSFIASLGHMTKIQPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESCG 1989
            HRKGM+QV+ARLS+I SLGHMTKI PQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE+CG
Sbjct: 433  HRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACG 492

Query: 1988 LVKNLALMTHVTTDEEDGPLVSLCRSLGVEDLELMSGEELHSANSFLVICNGLILGKHRK 1809
            LVKNLALMTHVTTDEE+ PL+SLC SLGVEDLEL+SGEELH+ NSFL+I NGLILGKHR+
Sbjct: 493  LVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLIIFNGLILGKHRR 552

Query: 1808 PQHFANALRKLRRAGRIGDFVSVFVNEKQRCVYIASDGGRVCRPLVVADKGVSRIKEHHM 1629
            PQ FANALRKLRRAG+IG+FVSVFVNEKQ CVYIASDGGRVCRP+V+ADKG SRIKEHHM
Sbjct: 553  PQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIADKGKSRIKEHHM 612

Query: 1628 KELRDGARTFNDFLREGLIEYLDVNEQNNALIALYDGEAEPETTHIEIEPFTILGVCAGL 1449
            KEL DG RTF+DFLR+GLIEYLDVNE+NNALIALY+ +A+PETTHIEIEPFTILGVCAGL
Sbjct: 613  KELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEIEPFTILGVCAGL 672

Query: 1448 IPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDSLLYLLVYPQRPLLTTKTIELVGYD 1269
            IPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDSLLYLLVYPQRPLLTT+TIELVGYD
Sbjct: 673  IPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTTRTIELVGYD 732

Query: 1268 KLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKLSAVCQKYPNNTMDRIV 1089
            KLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK SAV Q+Y NN  DRIV
Sbjct: 733  KLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQRYENNASDRIV 792

Query: 1088 RPQRVGRDAERTQLLDDDGLASPGEIIRPYDIYINKQSPINTKSTYESSKGLPDNAYKPS 909
            RP +VG DAER Q+LDDDGLA+PGEII+P DIYINK+SPI TK    S  GLPD+AYKPS
Sbjct: 793  RPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLISPVGLPDSAYKPS 852

Query: 908  IQTYKGARGETAVVDRVQLNSDKDNNLCFRFIIRHTRRPEVGDKFSSRHGQKGVCGTIIQ 729
             QT+KG  GE +VVDRV L SDK++NLC +F+IRHTRRPEVGDKFSSRHGQKGVCGTIIQ
Sbjct: 853  RQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRHGQKGVCGTIIQ 912

Query: 728  QEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPSGHAD 549
            QEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVSCGRFHYGSAFGEPSGHAD
Sbjct: 913  QEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHAD 972

Query: 548  RVEAISETLVKNGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVIDKMHARARGP 369
            +VE IS+TLVK+GFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV+DKMHAR  GP
Sbjct: 973  KVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGP 1032

Query: 368  RVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRACGMLG 189
            RVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASMLIFERLM+SSDPFEVQVCR CG+LG
Sbjct: 1033 RVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCGLLG 1092

Query: 188  YFNHKVKTSVCSSCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 39
            Y+NHK+K  +CS+CKNGDNISTMKLPYACKLLFQELQ+MNVVPRLKLTEA
Sbjct: 1093 YYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTEA 1142


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 1776 bits (4599), Expect = 0.0
 Identities = 873/1126 (77%), Positives = 988/1126 (87%), Gaps = 2/1126 (0%)
 Frame = -1

Query: 3410 IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFIETGIKKVVHANNIITSIVDPGLYLKYTD 3231
            IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYF+  GIKK+V AN+ I S VDPG+YL++ D
Sbjct: 31   IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVRANDRIVSTVDPGIYLRFKD 90

Query: 3230 VRIGDPSIKLDHAVKQLTPHMCRLSDITYAASILVDIEYTTGAGVNNLKRKVERKNVEIG 3051
            VRIG PS  +D   +QL+PHMCRLSD TYAA ILV++EY  G+  ++ K +VE+ +V IG
Sbjct: 91   VRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAPILVNVEYIYGS--HDQKTRVEKNDVVIG 148

Query: 3050 RLPIMLRSHKCILYGKDEAELAKLRECPLDPGGYFVVKGTEKVVLIQEQLSKNRIIIDSD 2871
            R+PIMLRS  C+LYGKDEAELA+L ECPLDPGGYFV+KGTEKV+LIQEQLSKNRIIID+D
Sbjct: 149  RMPIMLRSRSCVLYGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDTD 208

Query: 2870 RKGRLMAXXXXXXXXXXXXTNLIMDKEKIYLELNAFEKVVPIMVVMKAMGMESDQEVVQM 2691
            +KG + A            T + M+KEK+YL LN F K +PIMVV+KAMGMESDQEVVQM
Sbjct: 209  KKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFVKKIPIMVVIKAMGMESDQEVVQM 268

Query: 2690 LGRDPRYATLLLPSIQECVKENVHTQQQALEFLDKRVRKFLYNSNVSQEGRALIVLRDVF 2511
            +GRDPRY+ LLLPSI+EC   +++TQQ+ALE+LD             +E RAL +LRDVF
Sbjct: 269  VGRDPRYSALLLPSIEECAGLSIYTQQKALEYLD------------GKENRALTILRDVF 316

Query: 2510 IANVPVHQHNFRPKCMYVAVMLRRMMEAYLNKDAMDDKDYVGNKRLELSGQMISLLFEDL 2331
            +ANVPVH++NFRPKC+YVAVMLRRMMEA LNKDAMDDKDYVGNKRLELSGQ+ISLLFEDL
Sbjct: 317  LANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRLELSGQLISLLFEDL 376

Query: 2330 FKTANSDIKKRVDAVLAK--RSTQFDFLQYIKGDIITRGLENSMATGNWDLKRFKMHRKG 2157
            FKT  +++++ +D VL K  RS++FD  QYI  D IT GLE +++TGN+D+KRFKMHRKG
Sbjct: 377  FKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERTLSTGNFDVKRFKMHRKG 436

Query: 2156 MTQVLARLSFIASLGHMTKIQPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESCGLVKN 1977
            MTQVL RLS+IASLG MT++ PQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE+CGLVKN
Sbjct: 437  MTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKN 496

Query: 1976 LALMTHVTTDEEDGPLVSLCRSLGVEDLELMSGEELHSANSFLVICNGLILGKHRKPQHF 1797
            LALMTHVTTD+E+GPL+SLC  LGVEDLEL+SGEELH+ NSFLVI NGLILGKHR+PQ+F
Sbjct: 497  LALMTHVTTDDEEGPLISLCYCLGVEDLELLSGEELHTPNSFLVIFNGLILGKHRRPQYF 556

Query: 1796 ANALRKLRRAGRIGDFVSVFVNEKQRCVYIASDGGRVCRPLVVADKGVSRIKEHHMKELR 1617
             N++RKLRRAG+IG+FVSVFVNEKQR VY+ASDGGRVCRPLV+AD+GVSRIKEHHMKELR
Sbjct: 557  VNSMRKLRRAGKIGEFVSVFVNEKQRAVYLASDGGRVCRPLVIADRGVSRIKEHHMKELR 616

Query: 1616 DGARTFNDFLREGLIEYLDVNEQNNALIALYDGEAEPETTHIEIEPFTILGVCAGLIPFP 1437
            DG RTF+DFLR+GLIEYLDVNE+NNAL+ALY+GEA PETTHIEIEPFTILGVCAGLIPFP
Sbjct: 617  DGVRTFDDFLRDGLIEYLDVNEENNALVALYEGEATPETTHIEIEPFTILGVCAGLIPFP 676

Query: 1436 HHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDSLLYLLVYPQRPLLTTKTIELVGYDKLGA 1257
            HHNQSPRNTYQCAMGKQAMGNIAYNQL+RMDSLLYLLVYPQRPLLTT+TIELVGYDKLGA
Sbjct: 677  HHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGA 736

Query: 1256 GQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKLSAVCQKYPNNTMDRIVRPQR 1077
            GQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKK  A+ QKY N   DRI+RP R
Sbjct: 737  GQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYPAIRQKYENGASDRILRPDR 796

Query: 1076 VGRDAERTQLLDDDGLASPGEIIRPYDIYINKQSPINTKSTYESSKGLPDNAYKPSIQTY 897
                 ER ++LD DGLA+PGEII+P DIY+ K+ PI+T    +SS  L +  Y+PS  +Y
Sbjct: 797  T---VERERVLDYDGLAAPGEIIKPSDIYVKKECPIDTMGPVKSSAALENIKYRPSPLSY 853

Query: 896  KGARGETAVVDRVQLNSDKDNNLCFRFIIRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDF 717
            KG  GE+ V+DRV L+SD++NNLC + +IRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDF
Sbjct: 854  KGPEGESPVIDRVALSSDRNNNLCIKVMIRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDF 913

Query: 716  PFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADRVEA 537
            PFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVSCGRFHYGSAFGEPSGHAD VEA
Sbjct: 914  PFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADTVEA 973

Query: 536  ISETLVKNGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVIDKMHARARGPRVML 357
            ISETLV  GFSY+GKD IYSGITGCPLQAYIFMGPIYYQKLKHMV+DKMHAR  GPRVML
Sbjct: 974  ISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGNGPRVML 1033

Query: 356  TRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRACGMLGYFNH 177
            TRQPTEGR+R+GGLR+GEMERDCLIAYGASMLIFERLMISSDPFEVQVCR CG+LGYFN 
Sbjct: 1034 TRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRVCGLLGYFNQ 1093

Query: 176  KVKTSVCSSCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 39
            K++  +CS+CKNGDNISTMKLPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1094 KLRAGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1139


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score = 1767 bits (4577), Expect = 0.0
 Identities = 866/1128 (76%), Positives = 992/1128 (87%), Gaps = 4/1128 (0%)
 Frame = -1

Query: 3410 IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFIETGIKKVVHANNIITSIVDPGLYLKYTD 3231
            IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYF+ T IKK+V AN+ I S  DP +YL++ D
Sbjct: 35   IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKANDRIESSTDPSIYLRFLD 94

Query: 3230 VRIGDPSIKLDHAVKQLTPHMCRLSDITYAASILVDIEYTTGAGVNNLKRKVERKNVEIG 3051
            VRIG+PS+ ++   + + PHMCRLSD+TYAA ILVDIEY   +      R  E+K+V IG
Sbjct: 95   VRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEESHAQKAPR--EKKDVVIG 152

Query: 3050 RLPIMLRSHKCILYGKDEAELAKLRECPLDPGGYFVVKGTEKVVLIQEQLSKNRIIIDSD 2871
            R+PIMLRS  C+L+GKDEAELA+L ECPLDPGGYF++KGTEKVVLIQEQLSKNRIIID+D
Sbjct: 153  RMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVLIQEQLSKNRIIIDTD 212

Query: 2870 RKGRLMAXXXXXXXXXXXXTNLIMDKEKIYLELNAFEKV-VPIMVVMKAMGMESDQEVVQ 2694
            +KG + A            T + M+ EKIYL+LN F    +PIMVV+KAMGMES QEVVQ
Sbjct: 213  KKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMVVLKAMGMESIQEVVQ 272

Query: 2693 MLGRDPRYATLLLPSIQECVKENVHTQQQALEFLDKRVRKFLYNSNVSQ-EGRALIVLRD 2517
            M+GRDPRY  LLLPSI+EC KE ++TQ+QALE+L+ +V+KF + S   + EGRAL +LRD
Sbjct: 273  MVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFASAPPEKEGRALGILRD 332

Query: 2516 VFIANVPVHQHNFRPKCMYVAVMLRRMMEAYLNKDAMDDKDYVGNKRLELSGQMISLLFE 2337
            VF+ANVPV+++NF PKC+YVAVM+RRMM+A L+KDAMDDKDYVGNKRLELSGQ+ISLLFE
Sbjct: 333  VFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGNKRLELSGQLISLLFE 392

Query: 2336 DLFKTANSDIKKRVDAVLAK--RSTQFDFLQYIKGDIITRGLENSMATGNWDLKRFKMHR 2163
            DLFKT  S++KK +D +L K  RS++FDF Q++  +II+ GLE +++TGNWD+KRF+MHR
Sbjct: 393  DLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERTLSTGNWDVKRFRMHR 452

Query: 2162 KGMTQVLARLSFIASLGHMTKIQPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESCGLV 1983
            KGM+QVLARLSFI+++GH+T++ PQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE+CGLV
Sbjct: 453  KGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLV 512

Query: 1982 KNLALMTHVTTDEEDGPLVSLCRSLGVEDLELMSGEELHSANSFLVICNGLILGKHRKPQ 1803
            KNLALMTHVTTD+E+GPL+SLC  LGVEDLEL+S EELH+ NSFLVI NG ILGKHR+PQ
Sbjct: 513  KNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFLVIFNGRILGKHRRPQ 572

Query: 1802 HFANALRKLRRAGRIGDFVSVFVNEKQRCVYIASDGGRVCRPLVVADKGVSRIKEHHMKE 1623
            +FA  +R LRRAG+IG+FVSVFVNEKQ CVYIASDGGRVCRPLV+ADKGVSRIKE+HMKE
Sbjct: 573  YFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGVSRIKEYHMKE 632

Query: 1622 LRDGARTFNDFLREGLIEYLDVNEQNNALIALYDGEAEPETTHIEIEPFTILGVCAGLIP 1443
            L DG RTF+DFLR+GLIEYLDVNE+NNALIALY+GEA PETTHIEIEPFTILGV AGLIP
Sbjct: 633  LSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFTILGVVAGLIP 692

Query: 1442 FPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDSLLYLLVYPQRPLLTTKTIELVGYDKL 1263
            +PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+LLYLLVYPQRPLLTTKTIELVGYDKL
Sbjct: 693  YPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPLLTTKTIELVGYDKL 752

Query: 1262 GAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKLSAVCQKYPNNTMDRIVRP 1083
            GAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV KK S+V QKY NNT DRIVRP
Sbjct: 753  GAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSVNQKYENNTADRIVRP 812

Query: 1082 QRVGRDAERTQLLDDDGLASPGEIIRPYDIYINKQSPINTKSTYESSKGLPDNAYKPSIQ 903
             R        Q+LDDDGLA+PGEIIRP DIY+NKQSPI  K +     G+PDNAY+P  Q
Sbjct: 813  NRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSPIIMKGS--PLPGIPDNAYRPCRQ 870

Query: 902  TYKGARGETAVVDRVQLNSDKDNNLCFRFIIRHTRRPEVGDKFSSRHGQKGVCGTIIQQE 723
             +KG+ GE  VVDRV L++DK++ LC +F+IR TRRPE+GDKFSSRHGQKGVCGTI+QQE
Sbjct: 871  IFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFSSRHGQKGVCGTIVQQE 930

Query: 722  DFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADRV 543
            DFPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVSCGRFHYGSAFGEPSGHAD+V
Sbjct: 931  DFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADKV 990

Query: 542  EAISETLVKNGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVIDKMHARARGPRV 363
            +AISETL+K GFSY+GKDF+YSGITGCPLQAYIFMGPIYYQKLKHMV+DKMHAR  GPRV
Sbjct: 991  DAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRV 1050

Query: 362  MLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRACGMLGYF 183
            MLTRQPTEGR+R+GGLR+GEMERDCLIAYGASMLI+ERLMISSDPFEVQVCR CG+LGY+
Sbjct: 1051 MLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRVCGLLGYY 1110

Query: 182  NHKVKTSVCSSCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 39
            NHK+KT +CSSCKNGDNISTMKLPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1111 NHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1158


>ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|222868352|gb|EEF05483.1|
            predicted protein [Populus trichocarpa]
          Length = 1141

 Score = 1763 bits (4567), Expect = 0.0
 Identities = 870/1133 (76%), Positives = 992/1133 (87%), Gaps = 9/1133 (0%)
 Frame = -1

Query: 3410 IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFIETGIKKVVHANNIITSIVDPGLYLKYTD 3231
            +KSAVDKFQLLPEFLK RGLVKQHLDSFNYFI  GIKK+V AN+ I S VDP LYL++TD
Sbjct: 14   VKSAVDKFQLLPEFLKGRGLVKQHLDSFNYFINIGIKKIVRANDRIVSTVDPSLYLRFTD 73

Query: 3230 VRIGDPSIKLDHAVKQLTPHMCRLSDITYAASILVDIEYTTGAGVNNLKRKVERKNVEIG 3051
            V+IG PS+ +D   +Q+TPHMCRLSD TYAA ILV+IEY +G+  +  K K+ + +V IG
Sbjct: 74   VKIGKPSMVVDAISEQITPHMCRLSDTTYAAPILVNIEYISGS--HGRKEKMIKNDVVIG 131

Query: 3050 RLPIMLRSHKCILYGKDEAELAKLRECPLDPGGYFVVKGTEKVVLIQEQLSKNRIIIDSD 2871
            R+PIMLRS  C+LYGK+EAELA+L ECPLDPGGYFVVKGTEKV+LIQEQLSKNRIIID+D
Sbjct: 132  RMPIMLRSCCCVLYGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDND 191

Query: 2870 RKGRLMAXXXXXXXXXXXXTNLIMDKEKIYLELNAFEKVVPIMVVMKAMGMESDQEVVQM 2691
            +KG + A            T ++M+KEK+YL LN F K +PIMVVMKAMGMESDQEVVQM
Sbjct: 192  KKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGMESDQEVVQM 251

Query: 2690 LGRDPRYATLLLPSIQECVKENVHTQQQALEFLDKRVRKFLYNSNVSQ-EGRALIVLRDV 2514
            +GRDPRY+ LLLPSI+EC    V+TQQQALE+L+  V++  Y+S+ ++ E RAL +LRDV
Sbjct: 252  VGRDPRYSALLLPSIEECASHGVYTQQQALEYLEAMVKRSTYSSSSTEKENRALAILRDV 311

Query: 2513 FIANVPVHQHNFRPKCMYVAVMLRRMMEAYLNKDAMDDKDYVGNKRLELSGQMISLLFED 2334
            FIANVPV ++NFRPKC+YVAVMLRRMMEA LNKDAMDDKDYVGNKRLELSGQ+ISLLFED
Sbjct: 312  FIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSGQLISLLFED 371

Query: 2333 LFKTANSDIKKRVDAVLAK--RSTQFDFLQYIKGDIITRGLENSMATGNWDLKRFKMHRK 2160
            LFKT  ++++K  D +L K  RS++FDF QYI  D IT GLE +++TGNWD+KRF+M+RK
Sbjct: 372  LFKTMITEVQKTADTLLVKQNRSSRFDFSQYIVRDSITNGLERALSTGNWDVKRFRMNRK 431

Query: 2159 GMTQVLARLSFIASLGHMTKIQPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESCGLVK 1980
            G+TQVL RLS++ASLGHMT+I PQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE+CGLVK
Sbjct: 432  GVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVK 491

Query: 1979 NLALMTHVTTDEEDGPLVSLCRSLGVEDLELMSGEELHSANSFLVICNGLILGKHRKPQH 1800
            NLALMTHVTTDEE+ PL+SLC+ LGVEDLEL+SGEELH+ NSFLVI NGLILGKHR+PQ 
Sbjct: 492  NLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHTPNSFLVIFNGLILGKHRRPQQ 551

Query: 1799 FANALRKLRRAGRIGDFVSVFVNEKQRCVYIASDGGRVCRPLVVADKGVSRIKEHHMKEL 1620
            FANA+RKLRRAG+IG+FVSVFVNEKQR VYIASDGGRVCRPLV+ADKGVSRIKEHHM+EL
Sbjct: 552  FANAMRKLRRAGKIGEFVSVFVNEKQRAVYIASDGGRVCRPLVIADKGVSRIKEHHMREL 611

Query: 1619 RDGARTFNDFLREGLIEYLDVNEQNNALIALYDGEAEPETTHIEIEPFTILGVCAGLIPF 1440
             DGARTF+DFL EGLIEYLDVNE+NNALIALY+ EA PETTHIEIEPFTILGV AGLIP+
Sbjct: 612  MDGARTFDDFLHEGLIEYLDVNEENNALIALYEWEATPETTHIEIEPFTILGVVAGLIPY 671

Query: 1439 PHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDSLLYLLVYPQRPLLTTKTIELVGYDKLG 1260
            PHHNQSPRNTYQCAMGKQAMGNIAYNQ  RMDSLLYLLVYPQRPLLTT+TIELVGYDKLG
Sbjct: 672  PHHNQSPRNTYQCAMGKQAMGNIAYNQASRMDSLLYLLVYPQRPLLTTRTIELVGYDKLG 731

Query: 1259 AGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKLSAVCQKYPNNTMDRIVRPQ 1080
            AGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIV+KK +   QKY N   DRI+RP+
Sbjct: 732  AGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKYTCTNQKYENGASDRILRPR 791

Query: 1079 RVGRDAERTQLLDDDGLASPGEIIRPYDIYINKQSPINTKSTYESSKGLPDNAYKPSIQT 900
               ++ ER ++LDDDGLA+PGEIIR  DIYINK+SPI T+   +S+  L D  Y+P  Q 
Sbjct: 792  ---KNEERERVLDDDGLAAPGEIIRHGDIYINKESPIETRGPLKSAAALADVKYRPCAQI 848

Query: 899  YKGARGETAVVDRVQLNSDKDNNLCFRFIIRHTRRPEVGDKFSSRHGQKGVCGTIIQQED 720
            +KG  GE+ VVDRV L SDK+NNLC ++ IRHTRRPEVGDKFSSRHGQKGVCGTIIQQED
Sbjct: 849  FKGTEGESCVVDRVALCSDKNNNLCIKYKIRHTRRPEVGDKFSSRHGQKGVCGTIIQQED 908

Query: 719  FPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADRVE 540
            FPFSERGICPDLIMNPHGFPSRMT+GKMIELLGGKAGVSCGRFHYGSAFGEPSGHADRVE
Sbjct: 909  FPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADRVE 968

Query: 539  AIS------ETLVKNGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVIDKMHARA 378
            AI       ETLVK+GFSY+GKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV+DKMHAR 
Sbjct: 969  AIRHFLSLIETLVKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARG 1028

Query: 377  RGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRACG 198
             GPRVMLTRQPT+GR+R+GGLR+GEME+DCL+AYG SML++ERLM+SSD FE QVCRACG
Sbjct: 1029 SGPRVMLTRQPTDGRARNGGLRVGEMEKDCLVAYGTSMLLYERLMVSSDQFEAQVCRACG 1088

Query: 197  MLGYFNHKVKTSVCSSCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 39
            +LGY+N K+K ++C++CKNGD +STMKLPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1089 LLGYYNQKLKAAMCTTCKNGDKVSTMKLPYACKLLIQELQSMNIVPRLKLAEA 1141


>ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine
            max]
          Length = 1152

 Score = 1720 bits (4455), Expect = 0.0
 Identities = 848/1130 (75%), Positives = 977/1130 (86%), Gaps = 6/1130 (0%)
 Frame = -1

Query: 3410 IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFIETGIKKVVHANNIITSIVDPGLYLKYTD 3231
            IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYF+ T IKK+V AN++I +   P +YL++ +
Sbjct: 40   IKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTDIKKIVRANDLIVASRYPHIYLRFLN 99

Query: 3230 VRIGDPSIKLDHAVKQLTPHMCRLSDITYAASILVDIEYTTGAGVN-NLKRKVERKNVEI 3054
            V IG PSI +D   + LTP  CRLSD+TYAA I  D+EYT G+    ++KRK++   VEI
Sbjct: 100  VGIGKPSIMIDEVTEDLTPQTCRLSDLTYAAPICADVEYTLGSHDKPDIKRKLK---VEI 156

Query: 3053 GRLPIMLRSHKCILYGKDEAELAKLRECPLDPGGYFVVKGTEKVVLIQEQLSKNRIIIDS 2874
            GR+PIMLRS  C+L+G+DEAELAKL ECPLDPGGYFV+KGTEKV+LIQEQLSKNRIIID+
Sbjct: 157  GRMPIMLRSCCCVLHGRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQLSKNRIIIDT 216

Query: 2873 DRKGRLMAXXXXXXXXXXXXTNLIMDKEKIYLELNAFEKVVPIMVVMKAMGMESDQEVVQ 2694
            D+KG + A            T ++M+KEK++L+LN F K VP+MVVMKAMGMESDQEV Q
Sbjct: 217  DKKGNITASVTSSTEKIKTKTVVVMEKEKLWLQLNKFPKKVPLMVVMKAMGMESDQEVTQ 276

Query: 2693 MLGRDPRYATLLLPSIQECVKENVHTQQQALEFLDKRVRKFLYNSNVSQEGRALIVLRDV 2514
            M+GRDPRY+ LLLPSI+EC K  V+T++QALE+LDK             EG A   LRDV
Sbjct: 277  MVGRDPRYSFLLLPSIEECTKCKVYTREQALEYLDKL------------EGAAFSALRDV 324

Query: 2513 FIANVPVHQHNFRPKCMYVAVMLRRMMEAYLNKDAMDDKDYVGNKRLELSGQMISLLFED 2334
            F+ANVPV Q NFRPKC+YVAVM+RR+M+A LNKDAMDDKDYVGNKRLELSGQ+ISLLFED
Sbjct: 325  FLANVPVDQDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELSGQLISLLFED 384

Query: 2333 LFKTANSDIKKRVDAVLAK--RSTQFDFLQYIKG--DIITRGLENSMATGNWDLKRFKMH 2166
            LFK+  +++K   D +L K  ++  FD    +     IIT GLE +++TGN+++KRF+M 
Sbjct: 385  LFKSMTTEVKNLTDKMLEKPDKAKNFDICTLLTRTRSIITLGLERTLSTGNFEIKRFRME 444

Query: 2165 RKGMTQVLARLSFIASLGHMTKIQPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESCGL 1986
            RKGMTQVL RLSFI +LGHMT++ PQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESCGL
Sbjct: 445  RKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGESCGL 504

Query: 1985 VKNLALMTHVTTDEEDGPLVSLCRSLGVEDLELMSGEELHSANSFLVICNGLILGKHRKP 1806
            VKNLALMTHVTTDEE+ PL+SLC SLGVED++ +S EELH+ +SFLVI NGLILGKHR+P
Sbjct: 505  VKNLALMTHVTTDEEEKPLISLCESLGVEDMKDLSAEELHTPDSFLVIFNGLILGKHRRP 564

Query: 1805 QHFANALRKLRRAGRIGDFVSVFVNEKQRCVYIASDGGRVCRPLVVADKGVSRIKEHHMK 1626
             HFA A+RKLRRAG+IG+FVSV+VNEKQ CVY+ASDGGRVCRPLV+ADKG+SRIK+HHMK
Sbjct: 565  LHFATAIRKLRRAGKIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADKGISRIKQHHMK 624

Query: 1625 ELRDGARTFNDFLREGLIEYLDVNEQNNALIALYDGEAEPETTHIEIEPFTILGVCAGLI 1446
            EL DG RTF+DFLR+GL+EYLDVNE+NNALIALY+G+A  ETTHIEIEPFTILGV AGLI
Sbjct: 625  ELMDGVRTFDDFLRDGLLEYLDVNEENNALIALYEGDATSETTHIEIEPFTILGVIAGLI 684

Query: 1445 PFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDSLLYLLVYPQRPLLTTKTIELVGYDK 1266
            P+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMDSLLYLLVYPQRPLLTTKTIELVGYDK
Sbjct: 685  PYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLTTKTIELVGYDK 744

Query: 1265 LGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKLSAVCQKYPNNTMDRIVR 1086
            LGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKK +A+ QK+ N+T DRI+R
Sbjct: 745  LGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYNAIIQKHSNDTSDRILR 804

Query: 1085 PQRVGRDAERTQLLDDDGLASPGEIIRPYDIYINKQSPINTKSTYE-SSKGLPDNAYKPS 909
            P R    A R Q+LDDDG+A+PGEI+RPYDIYINKQSPI+T++    S+  LPD+AY+ +
Sbjct: 805  PNRTADTAGRMQILDDDGIAAPGEILRPYDIYINKQSPIDTRTPKTGSAANLPDSAYRSN 864

Query: 908  IQTYKGARGETAVVDRVQLNSDKDNNLCFRFIIRHTRRPEVGDKFSSRHGQKGVCGTIIQ 729
             Q++KG  GE  VVDRV L SDKDNN+C +F+IRHTRRPE+GDKFSSRHGQKGVCGTI+ 
Sbjct: 865  AQSFKGNGGE--VVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRHGQKGVCGTIVP 922

Query: 728  QEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPSGHAD 549
            QEDFPFSE+GICPDLIMNPHGFPSRMT+GKMIELLGGKAGVSCGRFHYGSAFGE SGHAD
Sbjct: 923  QEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGERSGHAD 982

Query: 548  RVEAISETLVKNGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVIDKMHARARGP 369
            +VE ISETLV  GF+YSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV+DKMHAR  GP
Sbjct: 983  KVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGP 1042

Query: 368  RVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRACGMLG 189
            RVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASMLI+ERLM+SSDPFEVQVC ACG+LG
Sbjct: 1043 RVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEVQVCTACGLLG 1102

Query: 188  YFNHKVKTSVCSSCKNGDNISTMKLPYACKLLFQELQSMNVVPRLKLTEA 39
            Y+NHK+KT +CSSCKNGDNISTMKLPYACKL+ QELQSMN+VPRLKL +A
Sbjct: 1103 YYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLADA 1152