BLASTX nr result

ID: Coptis21_contig00000657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000657
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37242.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vi...    62   6e-08
emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera]    62   6e-08
ref|XP_003580101.1| PREDICTED: CLIP-associating protein 1-B-like...    60   1e-07
dbj|BAK07648.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   1e-07

>emb|CBI37242.3| unnamed protein product [Vitis vinifera]
          Length = 530

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = +1

Query: 235 SLCLSKYWEDAPEIQQAADLYEDLIKCCVADAMRE 339
           SL + +YW DAPEIQ++ADLYEDLIKCCVADAM E
Sbjct: 246 SLLILEYWADAPEIQRSADLYEDLIKCCVADAMSE 280


>ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vitis vinifera]
          Length = 1440

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = +1

Query: 235 SLCLSKYWEDAPEIQQAADLYEDLIKCCVADAMRE 339
           SL + +YW DAPEIQ++ADLYEDLIKCCVADAM E
Sbjct: 431 SLLILEYWADAPEIQRSADLYEDLIKCCVADAMSE 465


>emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera]
          Length = 1135

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = +1

Query: 235 SLCLSKYWEDAPEIQQAADLYEDLIKCCVADAMRE 339
           SL + +YW DAPEIQ++ADLYEDLIKCCVADAM E
Sbjct: 130 SLLILEYWADAPEIQRSADLYEDLIKCCVADAMSE 164


>ref|XP_003580101.1| PREDICTED: CLIP-associating protein 1-B-like [Brachypodium
           distachyon]
          Length = 1439

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +1

Query: 235 SLCLSKYWEDAPEIQQAADLYEDLIKCCVADAMRE 339
           +L + +YW DAPEIQ++ADLYEDLIKCCVADAM E
Sbjct: 432 ALLILEYWADAPEIQRSADLYEDLIKCCVADAMSE 466


>dbj|BAK07648.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1156

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +1

Query: 235 SLCLSKYWEDAPEIQQAADLYEDLIKCCVADAMRE 339
           +L + +YW DAPEIQ++ADLYEDLIKCCVADAM E
Sbjct: 432 ALLILEYWADAPEIQRSADLYEDLIKCCVADAMSE 466


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