BLASTX nr result

ID: Coptis21_contig00000653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000653
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304957.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
ref|XP_002316618.1| predicted protein [Populus trichocarpa] gi|2...   137   8e-31
ref|XP_002518554.1| ATP binding protein, putative [Ricinus commu...   135   4e-30
ref|XP_003517662.1| PREDICTED: cysteine-rich receptor-like prote...   135   5e-30
ref|XP_003552420.1| PREDICTED: cysteine-rich receptor-like prote...   134   7e-30

>ref|XP_002304957.1| predicted protein [Populus trichocarpa] gi|222847921|gb|EEE85468.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score =  138 bits (348), Expect = 5e-31
 Identities = 76/184 (41%), Positives = 108/184 (58%), Gaps = 6/184 (3%)
 Frame = +1

Query: 10  QTQELLLEICPNDTASYTSNSQFQTNLNILLPSLLSDGTRD---GFFNTSIGTSPDIVYG 180
           Q    L   C N+T +YT NS +Q NLN+LL SL+S+ TR+   GF+N+S+G  PD VYG
Sbjct: 23  QDPSYLYRSCSNET-TYTRNSTYQANLNLLLSSLVSNATRNNLNGFYNSSLGLDPDDVYG 81

Query: 181 LVQCRGDISMEDCRSCLNNSAVEIIRRCPNRKDAALRYELCILRYSNTRFFSQVDGTYRE 360
           L  CRGD++   C++C+  +A E I+RCP  K   L Y+LC LRYSN  FF+ +D     
Sbjct: 82  LFLCRGDVNKNACQNCVALAAKEAIQRCPVEKVVVLWYDLCFLRYSNRAFFATMDQDPGV 141

Query: 361 RTPNPANVSDADANRYNRQLGNLLKDLSTTAASVVT---KFGAASTDYSDFSKIYGLVMC 531
              N  N++  +  R+NR +   + D +T A S  +   KF A    +++F  +Y LV C
Sbjct: 142 TLYNTQNIA-YEPERFNRLVATSMNDTATQATSATSGAKKFAAKEVYFNEFLNLYSLVQC 200

Query: 532 TRDL 543
           T DL
Sbjct: 201 TPDL 204


>ref|XP_002316618.1| predicted protein [Populus trichocarpa] gi|222859683|gb|EEE97230.1|
           predicted protein [Populus trichocarpa]
          Length = 674

 Score =  137 bits (346), Expect = 8e-31
 Identities = 75/184 (40%), Positives = 106/184 (57%), Gaps = 6/184 (3%)
 Frame = +1

Query: 10  QTQELLLEICPNDTASYTSNSQFQTNLNILLPSLLSDGTRD---GFFNTSIGTSPDIVYG 180
           Q    L   CPN T ++T NS +Q NLN+LL SL S+ TR+   GF+N S G  PD VYG
Sbjct: 23  QDPTFLYPYCPN-TTTFTRNSTYQANLNLLLSSLSSNATRNNINGFYNVSAGQDPDAVYG 81

Query: 181 LVQCRGDISMEDCRSCLNNSAVEIIRRCPNRKDAALRYELCILRYSNTRFFSQVDGTYRE 360
           +  CRGD+S   CR+C+N +A +++ RCP  K A + ++ C LRYSN   FS VD  +  
Sbjct: 82  MFLCRGDVSNSVCRNCVNFAAKDVLERCPIEKVAMIWFDECELRYSNRNIFSTVDQDFTL 141

Query: 361 RTPNPANVSDADANRYNRQLGNLLKDLSTTAASV---VTKFGAASTDYSDFSKIYGLVMC 531
              +P NV+    +R+N+ +   + D++  AAS      KF     +Y+   K+Y LV C
Sbjct: 142 FMMSPNNVT-VQPDRFNQLVETTINDIAARAASAPSGAKKFAVQQVNYTGIQKLYTLVQC 200

Query: 532 TRDL 543
           T DL
Sbjct: 201 TPDL 204


>ref|XP_002518554.1| ATP binding protein, putative [Ricinus communis]
           gi|223542399|gb|EEF43941.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 579

 Score =  135 bits (340), Expect = 4e-30
 Identities = 76/182 (41%), Positives = 104/182 (57%), Gaps = 4/182 (2%)
 Frame = +1

Query: 10  QTQELLLEICPNDTASYTSNSQFQTNLNILLPSLLSDGTRD-GFFNTSIGTSPDIVYGLV 186
           Q +E L  +C N TA +T NS +QTNLN LL SL ++     GFFN   G  PD VYG  
Sbjct: 25  QPREPLYYVCSNTTA-FTPNSTYQTNLNKLLSSLSNNANNSIGFFNIPSGQQPDDVYGSF 83

Query: 187 QCRGDISMEDCRSCLNNSAVEIIRRCPNRKDAALRYELCILRYSNTRFFSQVDGTYRERT 366
            CRGD+S + C+ C+  +  +I++RCP  K A + Y+ C+LRY N  F S +D T     
Sbjct: 84  LCRGDVSTDVCQDCVTFATQDIVKRCPIEKVAIVWYDECLLRYENQSFISTMDQTPGLYM 143

Query: 367 PNPANVSDADANRYNRQLGNLLKDLST---TAASVVTKFGAASTDYSDFSKIYGLVMCTR 537
            N  N+S +D  R+N  L + + +L+T   TAAS   KF      ++ F K+Y LV CT 
Sbjct: 144 WNTQNISTSDQVRFNALLASTMNNLATEASTAASGEKKFAVKEDSFTSFQKLYSLVQCTP 203

Query: 538 DL 543
           DL
Sbjct: 204 DL 205


>ref|XP_003517662.1| PREDICTED: cysteine-rich receptor-like protein kinase 29-like
           [Glycine max]
          Length = 674

 Score =  135 bits (339), Expect = 5e-30
 Identities = 75/172 (43%), Positives = 103/172 (59%), Gaps = 3/172 (1%)
 Frame = +1

Query: 37  CPNDTASYTSNSQFQTNLNILLPSLLSDGTRD-GFFNTSIGTSPDIVYGLVQCRGDISME 213
           C N   +YT+NS +QTNLN LL +L S    D GF+N S G + D VY +  CRGD+  +
Sbjct: 47  CNNSNGNYTANSIYQTNLNTLLSTLTSHTEIDYGFYNFSHGQNSDKVYAIGLCRGDVKPD 106

Query: 214 DCRSCLNNSAVEIIRRCPNRKDAALRYELCILRYSNTRFFSQVDGTYRERTPNPANVSDA 393
           +CRSCLNNS V + R CP + +A    E C+LRYSN   F  +D ++     N  N +DA
Sbjct: 107 ECRSCLNNSRVSLTRLCPKQLEAINWEEKCMLRYSNRAIFHTMDASFSYHMNNVNNATDA 166

Query: 394 DANRYNRQLGNLLKDLSTTAAS--VVTKFGAASTDYSDFSKIYGLVMCTRDL 543
           +   +N+ LG LL++LS  AAS     K+ A +  +++   IYGLV CT DL
Sbjct: 167 E--EFNKVLGELLRNLSDKAASGDPRRKYAADTAVFANLQTIYGLVQCTPDL 216


>ref|XP_003552420.1| PREDICTED: cysteine-rich receptor-like protein kinase 29-like
           [Glycine max]
          Length = 659

 Score =  134 bits (338), Expect = 7e-30
 Identities = 75/172 (43%), Positives = 104/172 (60%), Gaps = 3/172 (1%)
 Frame = +1

Query: 37  CPNDTASYTSNSQFQTNLNILLPSLLSDGTRD-GFFNTSIGTSPDIVYGLVQCRGDISME 213
           C N   +YT+NS +QTNLN LL +L S    D GF+N S G + D VY +  CRGD+  +
Sbjct: 36  CNNSNGNYTANSIYQTNLNTLLSTLTSHTEIDYGFYNFSHGQNSDKVYAIGLCRGDVKPD 95

Query: 214 DCRSCLNNSAVEIIRRCPNRKDAALRYELCILRYSNTRFFSQVDGTYRERTPNPANVSDA 393
           +CRSCLNNS V + R CP + +A    E C+LRYSN   F  +D ++     N  N +DA
Sbjct: 96  ECRSCLNNSRVSLTRLCPKQFEAIKWEEKCMLRYSNRAIFHTMDASFSYPMSNINNATDA 155

Query: 394 DANRYNRQLGNLLKDLSTTAASVVT--KFGAASTDYSDFSKIYGLVMCTRDL 543
           +   +N+ LG LL++LS  AAS  +  K+ A +  +++   IYGLV CT DL
Sbjct: 156 E--EFNKVLGELLRNLSDKAASGDSRRKYAADTAVFANLQTIYGLVQCTPDL 205


Top