BLASTX nr result

ID: Coptis21_contig00000640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000640
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ...   238   1e-60
ref|XP_002319087.1| predicted protein [Populus trichocarpa] gi|2...   230   4e-58
emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]   229   7e-58
ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g...   229   9e-58
emb|CBI35182.3| unnamed protein product [Vitis vinifera]              229   9e-58

>ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 548

 Score =  238 bits (607), Expect = 1e-60
 Identities = 127/205 (61%), Positives = 146/205 (71%), Gaps = 4/205 (1%)
 Frame = +1

Query: 13  PQNAGRGPGFGPNPQYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTN 189
           P NAG GPG+G NPQYMP PRQ +NYYPP+DLP  MEKQ HQG+S YGR+A MGVH S+N
Sbjct: 357 PPNAGGGPGYG-NPQYMPPPRQIENYYPPADLPPPMEKQPHQGISAYGREAPMGVHGSSN 415

Query: 190 AQPPQAVLTQVTQHMQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEI 369
           +Q   +++TQ+TQ MQIPLSYADAVIG AG++ISYIRR SGAT+TIQETRGVPGEMTVEI
Sbjct: 416 SQAAPSMITQITQQMQIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEI 475

Query: 370 NGSASQVQTAQQLIQNFMXXXXXXXXXXXXXXXXXXXXXXXQNFMAEAASAQQNPANGPT 549
           +G+ASQVQTAQQLI                           QNFMAEA +  Q    G T
Sbjct: 476 SGTASQVQTAQQLI---------------------------QNFMAEAGAPTQAQTGGST 508

Query: 550 D---NSYGSHGSVYSSPPSNTGRAG 615
           D   N Y +HGSVY+SPPSN G AG
Sbjct: 509 DQGYNPYAAHGSVYASPPSNPGHAG 533


>ref|XP_002319087.1| predicted protein [Populus trichocarpa] gi|222857463|gb|EEE95010.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score =  230 bits (586), Expect = 4e-58
 Identities = 124/207 (59%), Positives = 142/207 (68%), Gaps = 6/207 (2%)
 Frame = +1

Query: 13  PQNAGRGPGFGPNPQYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTN 189
           P N G GPG+G NPQYMP PRQ DNYYPP+D+P  MEKQ HQG+S YGR+A MG H+S+N
Sbjct: 201 PPNHGGGPGYGQNPQYMPPPRQLDNYYPPADMPPLMEKQPHQGISAYGREAPMGSHASSN 260

Query: 190 AQPPQAVLTQVTQHMQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEI 369
           AQ   +++TQ+TQ MQIPLSYADAVIG AG++ISYIRR SGAT+TIQETRGVPG MTVEI
Sbjct: 261 AQAAPSMITQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGAMTVEI 320

Query: 370 NGSASQVQTAQQLIQNFMXXXXXXXXXXXXXXXXXXXXXXXQNFMAEAASAQQNPANGPT 549
           +G+ASQVQTAQQLI                           QNFMAEA +  Q    G  
Sbjct: 321 SGTASQVQTAQQLI---------------------------QNFMAEAGAPAQPQTGGAA 353

Query: 550 DNSYG--SHGSVYSSPPSN---TGRAG 615
           D  Y   SH SVY+SPPSN   TG AG
Sbjct: 354 DQGYNPYSHSSVYASPPSNPEHTGHAG 380


>emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]
          Length = 534

 Score =  229 bits (584), Expect = 7e-58
 Identities = 122/204 (59%), Positives = 141/204 (69%), Gaps = 4/204 (1%)
 Frame = +1

Query: 13  PQNAGRGPGFGPNPQYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTN 189
           P NA  GPGFGPNP YMP PRQ D+YYPP +LP  +EKQ HQG+S YGR+  MG H+ ++
Sbjct: 330 PPNASGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSS 389

Query: 190 AQPPQAVLTQVTQHMQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEI 369
           AQP  +++TQVTQ MQIPLSYADAVIG AG++ISYIRR SGAT+TIQETRGVPGEMTVEI
Sbjct: 390 AQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEI 449

Query: 370 NGSASQVQTAQQLIQNFMXXXXXXXXXXXXXXXXXXXXXXXQNFMAEAASAQQNPANGPT 549
           NG+ASQVQ AQQLIQ                           NFMAEAA+  Q  A G  
Sbjct: 450 NGTASQVQAAQQLIQALFLPVFDTKLL---------------NFMAEAAAPAQAQAGGSA 494

Query: 550 D---NSYGSHGSVYSSPPSNTGRA 612
           D   NSY +HGS+Y+SP SN   A
Sbjct: 495 DQGYNSYAAHGSMYASPASNPAHA 518


>ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 443

 Score =  229 bits (583), Expect = 9e-58
 Identities = 122/210 (58%), Positives = 145/210 (69%), Gaps = 9/210 (4%)
 Frame = +1

Query: 13  PQNAGRGPGFGPNPQYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTN 189
           P N G GPGFGP  QYMP PRQ D+YYP +++P  +++Q HQG+S YGRDAS+GVH+S+N
Sbjct: 249 PPNVGGGPGFGPPSQYMPPPRQLDSYYPSAEMPPPVDRQPHQGISAYGRDASIGVHASSN 308

Query: 190 AQPPQAVLTQVTQHMQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEI 369
            Q   +++TQ+TQ MQIPLSYADAVIG AG++ISYIRR SGAT+TIQE RGVPGEMTVEI
Sbjct: 309 TQSAPSIVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEI 368

Query: 370 NGSASQVQTAQQLIQNFMXXXXXXXXXXXXXXXXXXXXXXXQNFMAEAASAQQNPANGPT 549
           +G+ASQVQTAQQLI                           QNFMAEAA+A   PA   T
Sbjct: 369 SGTASQVQTAQQLI---------------------------QNFMAEAAAAAAAPAQPQT 401

Query: 550 D--------NSYGSHGSVYSSPPSNTGRAG 615
                    NSY +HGSVY+SPPSN G AG
Sbjct: 402 TVPAADQGYNSYPAHGSVYASPPSNPGHAG 431


>emb|CBI35182.3| unnamed protein product [Vitis vinifera]
          Length = 511

 Score =  229 bits (583), Expect = 9e-58
 Identities = 122/204 (59%), Positives = 141/204 (69%), Gaps = 4/204 (1%)
 Frame = +1

Query: 13  PQNAGRGPGFGPNPQYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTN 189
           P NA  GPGFGPNP YMP PRQ D+YYPP +LP  +EKQ HQG+S YGR+  MG H+ ++
Sbjct: 319 PPNASGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSS 378

Query: 190 AQPPQAVLTQVTQHMQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEI 369
           AQP  +++TQVTQ MQIPLSYADAVIG AG++ISYIRR SGAT+TIQETRGVPGEMTVEI
Sbjct: 379 AQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEI 438

Query: 370 NGSASQVQTAQQLIQNFMXXXXXXXXXXXXXXXXXXXXXXXQNFMAEAASAQQNPANGPT 549
           NG+ASQVQ AQQLI                           QNFMAEAA+  Q  A G  
Sbjct: 439 NGTASQVQAAQQLI---------------------------QNFMAEAAAPAQAQAGGSA 471

Query: 550 D---NSYGSHGSVYSSPPSNTGRA 612
           D   NSY +HGS+Y+SP SN   A
Sbjct: 472 DQGYNSYAAHGSMYASPASNPAHA 495


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