BLASTX nr result
ID: Coptis21_contig00000640
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00000640 (894 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ... 238 1e-60 ref|XP_002319087.1| predicted protein [Populus trichocarpa] gi|2... 230 4e-58 emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera] 229 7e-58 ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g... 229 9e-58 emb|CBI35182.3| unnamed protein product [Vitis vinifera] 229 9e-58 >ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis] gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis] Length = 548 Score = 238 bits (607), Expect = 1e-60 Identities = 127/205 (61%), Positives = 146/205 (71%), Gaps = 4/205 (1%) Frame = +1 Query: 13 PQNAGRGPGFGPNPQYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTN 189 P NAG GPG+G NPQYMP PRQ +NYYPP+DLP MEKQ HQG+S YGR+A MGVH S+N Sbjct: 357 PPNAGGGPGYG-NPQYMPPPRQIENYYPPADLPPPMEKQPHQGISAYGREAPMGVHGSSN 415 Query: 190 AQPPQAVLTQVTQHMQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEI 369 +Q +++TQ+TQ MQIPLSYADAVIG AG++ISYIRR SGAT+TIQETRGVPGEMTVEI Sbjct: 416 SQAAPSMITQITQQMQIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEI 475 Query: 370 NGSASQVQTAQQLIQNFMXXXXXXXXXXXXXXXXXXXXXXXQNFMAEAASAQQNPANGPT 549 +G+ASQVQTAQQLI QNFMAEA + Q G T Sbjct: 476 SGTASQVQTAQQLI---------------------------QNFMAEAGAPTQAQTGGST 508 Query: 550 D---NSYGSHGSVYSSPPSNTGRAG 615 D N Y +HGSVY+SPPSN G AG Sbjct: 509 DQGYNPYAAHGSVYASPPSNPGHAG 533 >ref|XP_002319087.1| predicted protein [Populus trichocarpa] gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa] Length = 392 Score = 230 bits (586), Expect = 4e-58 Identities = 124/207 (59%), Positives = 142/207 (68%), Gaps = 6/207 (2%) Frame = +1 Query: 13 PQNAGRGPGFGPNPQYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTN 189 P N G GPG+G NPQYMP PRQ DNYYPP+D+P MEKQ HQG+S YGR+A MG H+S+N Sbjct: 201 PPNHGGGPGYGQNPQYMPPPRQLDNYYPPADMPPLMEKQPHQGISAYGREAPMGSHASSN 260 Query: 190 AQPPQAVLTQVTQHMQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEI 369 AQ +++TQ+TQ MQIPLSYADAVIG AG++ISYIRR SGAT+TIQETRGVPG MTVEI Sbjct: 261 AQAAPSMITQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGAMTVEI 320 Query: 370 NGSASQVQTAQQLIQNFMXXXXXXXXXXXXXXXXXXXXXXXQNFMAEAASAQQNPANGPT 549 +G+ASQVQTAQQLI QNFMAEA + Q G Sbjct: 321 SGTASQVQTAQQLI---------------------------QNFMAEAGAPAQPQTGGAA 353 Query: 550 DNSYG--SHGSVYSSPPSN---TGRAG 615 D Y SH SVY+SPPSN TG AG Sbjct: 354 DQGYNPYSHSSVYASPPSNPEHTGHAG 380 >emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera] Length = 534 Score = 229 bits (584), Expect = 7e-58 Identities = 122/204 (59%), Positives = 141/204 (69%), Gaps = 4/204 (1%) Frame = +1 Query: 13 PQNAGRGPGFGPNPQYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTN 189 P NA GPGFGPNP YMP PRQ D+YYPP +LP +EKQ HQG+S YGR+ MG H+ ++ Sbjct: 330 PPNASGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSS 389 Query: 190 AQPPQAVLTQVTQHMQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEI 369 AQP +++TQVTQ MQIPLSYADAVIG AG++ISYIRR SGAT+TIQETRGVPGEMTVEI Sbjct: 390 AQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEI 449 Query: 370 NGSASQVQTAQQLIQNFMXXXXXXXXXXXXXXXXXXXXXXXQNFMAEAASAQQNPANGPT 549 NG+ASQVQ AQQLIQ NFMAEAA+ Q A G Sbjct: 450 NGTASQVQAAQQLIQALFLPVFDTKLL---------------NFMAEAAAPAQAQAGGSA 494 Query: 550 D---NSYGSHGSVYSSPPSNTGRA 612 D NSY +HGS+Y+SP SN A Sbjct: 495 DQGYNSYAAHGSMYASPASNPAHA 518 >ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] Length = 443 Score = 229 bits (583), Expect = 9e-58 Identities = 122/210 (58%), Positives = 145/210 (69%), Gaps = 9/210 (4%) Frame = +1 Query: 13 PQNAGRGPGFGPNPQYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTN 189 P N G GPGFGP QYMP PRQ D+YYP +++P +++Q HQG+S YGRDAS+GVH+S+N Sbjct: 249 PPNVGGGPGFGPPSQYMPPPRQLDSYYPSAEMPPPVDRQPHQGISAYGRDASIGVHASSN 308 Query: 190 AQPPQAVLTQVTQHMQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEI 369 Q +++TQ+TQ MQIPLSYADAVIG AG++ISYIRR SGAT+TIQE RGVPGEMTVEI Sbjct: 309 TQSAPSIVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEI 368 Query: 370 NGSASQVQTAQQLIQNFMXXXXXXXXXXXXXXXXXXXXXXXQNFMAEAASAQQNPANGPT 549 +G+ASQVQTAQQLI QNFMAEAA+A PA T Sbjct: 369 SGTASQVQTAQQLI---------------------------QNFMAEAAAAAAAPAQPQT 401 Query: 550 D--------NSYGSHGSVYSSPPSNTGRAG 615 NSY +HGSVY+SPPSN G AG Sbjct: 402 TVPAADQGYNSYPAHGSVYASPPSNPGHAG 431 >emb|CBI35182.3| unnamed protein product [Vitis vinifera] Length = 511 Score = 229 bits (583), Expect = 9e-58 Identities = 122/204 (59%), Positives = 141/204 (69%), Gaps = 4/204 (1%) Frame = +1 Query: 13 PQNAGRGPGFGPNPQYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTN 189 P NA GPGFGPNP YMP PRQ D+YYPP +LP +EKQ HQG+S YGR+ MG H+ ++ Sbjct: 319 PPNASGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSS 378 Query: 190 AQPPQAVLTQVTQHMQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEI 369 AQP +++TQVTQ MQIPLSYADAVIG AG++ISYIRR SGAT+TIQETRGVPGEMTVEI Sbjct: 379 AQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEI 438 Query: 370 NGSASQVQTAQQLIQNFMXXXXXXXXXXXXXXXXXXXXXXXQNFMAEAASAQQNPANGPT 549 NG+ASQVQ AQQLI QNFMAEAA+ Q A G Sbjct: 439 NGTASQVQAAQQLI---------------------------QNFMAEAAAPAQAQAGGSA 471 Query: 550 D---NSYGSHGSVYSSPPSNTGRA 612 D NSY +HGS+Y+SP SN A Sbjct: 472 DQGYNSYAAHGSMYASPASNPAHA 495