BLASTX nr result

ID: Coptis21_contig00000631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000631
         (2446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517116.1| conserved hypothetical protein [Ricinus comm...   305   3e-80
ref|XP_002314686.1| predicted protein [Populus trichocarpa] gi|2...   301   7e-79
ref|XP_002282784.1| PREDICTED: uncharacterized protein LOC100245...   282   3e-73
ref|XP_004139816.1| PREDICTED: uncharacterized protein LOC101210...   267   9e-69
ref|XP_002337586.1| predicted protein [Populus trichocarpa] gi|2...   265   6e-68

>ref|XP_002517116.1| conserved hypothetical protein [Ricinus communis]
            gi|223543751|gb|EEF45279.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 319

 Score =  305 bits (782), Expect = 3e-80
 Identities = 183/330 (55%), Positives = 215/330 (65%), Gaps = 3/330 (0%)
 Frame = -3

Query: 1559 MLRKRSRGVNSKQDLMADSPYLXXXXXXXXXXXXXLFNSPMLFTGLPTKAFSET-EDLIS 1383
            M+RKRSR  +SKQ LMAD  Y               F  P LFTG   K FSET E ++S
Sbjct: 1    MIRKRSRVSSSKQVLMAD--YSSILSPTEKYRKPTSF--PRLFTGFSFKNFSETTESVMS 56

Query: 1382 PTSTLDAMLFSSLPNPFWTDKNSPIKSPQESLLDKKHPWVKKLDSRGVGLGIVDALN-DE 1206
            PTS LD+  FS   NPF  D+N   K+ QES  D K  W  KLDS+G+GL IVDALN D+
Sbjct: 57   PTSILDSKPFSGFRNPFLPDQNLTPKT-QES--DTKRTW-DKLDSKGIGLAIVDALNYDD 112

Query: 1205 GSDMKLSKPDSRMVLFGSQLKIQIPPLSQVPPPETEYLQSPADFGIKTRNTQLEMXXXXX 1026
             +D  LSKP+SRMVLFGSQLKIQ+PPL   P  ++   +SPADFGIKTR++QL       
Sbjct: 113  KTDSNLSKPESRMVLFGSQLKIQVPPLPVSPTDQSP--KSPADFGIKTRHSQLGSSSSGL 170

Query: 1025 XXXXXXXXXXXXXFEYFNSGIGGSPRVFSGRLSASVMESSEEYTCVITHGPNPKTTHIFD 846
                             ++    SP VF+G LSA  ME SE+YTCVI++GPNPKTTHIFD
Sbjct: 171  SHSPVKKSVCGSANSSIDTS--SSPGVFNGSLSAIEMEQSEDYTCVISYGPNPKTTHIFD 228

Query: 845  DCIVEDCCGVVG-SSSLGKENSFLSDQVSYPSDDFLSFCYTCKKNLGQGKDIYIYRGEKA 669
            D IVE CC VV  S+S  + N FL D  SYPSD+FLSFCY CKKNLGQGKDIY+YRGEKA
Sbjct: 229  DYIVESCCDVVEFSTSRTQTNGFLGDGSSYPSDNFLSFCYACKKNLGQGKDIYMYRGEKA 288

Query: 668  FCSHECRYQEILLEEGMEKSDLDDIAKNCS 579
            FCS ECRYQE+L EEG++K D +D    CS
Sbjct: 289  FCSSECRYQEMLSEEGIDKLDHEDGYGTCS 318


>ref|XP_002314686.1| predicted protein [Populus trichocarpa] gi|222863726|gb|EEF00857.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  301 bits (770), Expect = 7e-79
 Identities = 178/328 (54%), Positives = 212/328 (64%), Gaps = 8/328 (2%)
 Frame = -3

Query: 1559 MLRKRSRGVNSKQDLMADSPYLXXXXXXXXXXXXXLFNSPMLFTGLPTKAFSET-EDLIS 1383
            M++KRSR   SKQ LM+    +               + P L TGL  K FSET E ++S
Sbjct: 1    MMKKRSRTATSKQALMSQHSSIPSPTDKFRKPT----SFPKLLTGLTFKNFSETAEAIMS 56

Query: 1382 PTSTLDAMLFSSLPNPFWTDKNSPIKSPQESLLDKKHPWVKKLDSRGVGLGIVDALNDEG 1203
            PTS LD+  FS L NPFW D     K+P+    D +  W  KLDS+G+GLGIVDAL+DE 
Sbjct: 57   PTSILDSKPFSGLKNPFWHDACPSPKTPEP---DTRRHW-DKLDSKGIGLGIVDALDDEE 112

Query: 1202 SDMKLSKPDSRMVLFGSQLKIQIPPLSQVPPPETEYLQSP---ADFGIKTRNTQLEMXXX 1032
            +D  LSKP+SRMVLFGSQLKIQIPPL   PP  +   QSP    DFGIKTRN+Q      
Sbjct: 113  TDSNLSKPESRMVLFGSQLKIQIPPLP--PPFLSPTDQSPKLNGDFGIKTRNSQFGSFSS 170

Query: 1031 XXXXXXXXXXXXXXXFEYFNSGIG--GSPRVFSGRLSASVMESSEEYTCVITHGPNPKTT 858
                               NSG+    SPRVF+G LSAS ME SE+YTCVITHGP PKTT
Sbjct: 171  GLSPSPVKKSLFGSA----NSGMDTPNSPRVFTGCLSASEMELSEDYTCVITHGPVPKTT 226

Query: 857  HIFDDCIVEDCCGVVGSSSLGKE--NSFLSDQVSYPSDDFLSFCYTCKKNLGQGKDIYIY 684
            HIFD+CIVE CCG VG S+  ++  N FL D ++Y SD FLSFC +CKKNL QGKDIYIY
Sbjct: 227  HIFDNCIVESCCGAVGFSASSRKDNNRFLGDGLTYRSDSFLSFCSSCKKNLEQGKDIYIY 286

Query: 683  RGEKAFCSHECRYQEILLEEGMEKSDLD 600
            RGE+AFCS+ECRYQ +LLEEG+++ D D
Sbjct: 287  RGERAFCSNECRYQVMLLEEGIDEVDPD 314


>ref|XP_002282784.1| PREDICTED: uncharacterized protein LOC100245904 [Vitis vinifera]
          Length = 307

 Score =  282 bits (722), Expect = 3e-73
 Identities = 173/330 (52%), Positives = 205/330 (62%), Gaps = 3/330 (0%)
 Frame = -3

Query: 1559 MLRKRSRGVNSKQDLMADSPYLXXXXXXXXXXXXXLF-NSPMLFTGLPTKAFSETEDLIS 1383
            MLRKRSR   SKQ LMAD   L              F +SP LFTG  +K FSETE ++S
Sbjct: 1    MLRKRSRASTSKQALMADCGSLPSPTDKYRRPPSSSFFSSPRLFTGFSSKVFSETETMMS 60

Query: 1382 PTSTLDAMLFSSLPNPFWTDKNSPIKSPQESLLDKKHPWVKKLDSRGVGLGIVDALNDEG 1203
            PTS LD+  FS   NPF T+  S IK P E   + +  W  KLDSR +GLGIVDAL  + 
Sbjct: 61   PTSILDSKPFSGFRNPF-TNTTSTIK-PSEP--EPRRHW-DKLDSRMIGLGIVDALTHDE 115

Query: 1202 SDMKLSKPDSRMVLFGSQLKIQIPPLSQVPPPETEYLQSPADFGIKTRNTQLEMXXXXXX 1023
            SD KLSKP+SRMVLFGSQLKIQIPPL        E  +SPADFGIKTRN+QL        
Sbjct: 116  SDPKLSKPESRMVLFGSQLKIQIPPLPSSVLSPAESPKSPADFGIKTRNSQLGPFSPCLS 175

Query: 1022 XXXXXXXXXXXXFEYFNSGI--GGSPRVFSGRLSASVMESSEEYTCVITHGPNPKTTHIF 849
                            NSG+    SPR+F+G LSA+ ME SE+YTCVI+HGPNP+TTHIF
Sbjct: 176  QSPAKKSGFGSA----NSGLEAPNSPRIFTGCLSATEMELSEDYTCVISHGPNPRTTHIF 231

Query: 848  DDCIVEDCCGVVGSSSLGKENSFLSDQVSYPSDDFLSFCYTCKKNLGQGKDIYIYRGEKA 669
            D+CI       VG S+  KEN           + FL+FC++C+KN+GQGKDIYIYRGEKA
Sbjct: 232  DNCI-------VGFSASRKENDVF-------PESFLNFCHSCRKNIGQGKDIYIYRGEKA 277

Query: 668  FCSHECRYQEILLEEGMEKSDLDDIAKNCS 579
            FCS ECR +EI+LEE ME  +  D+   CS
Sbjct: 278  FCSSECRQREIMLEERMEILEGGDVYGTCS 307


>ref|XP_004139816.1| PREDICTED: uncharacterized protein LOC101210425 [Cucumis sativus]
            gi|449492592|ref|XP_004159042.1| PREDICTED:
            uncharacterized LOC101210425 [Cucumis sativus]
          Length = 294

 Score =  267 bits (683), Expect = 9e-69
 Identities = 148/285 (51%), Positives = 178/285 (62%), Gaps = 5/285 (1%)
 Frame = -3

Query: 1451 FNSPMLFTGLPTKAFSETEDLISPTSTLDAMLFSSLPNPFWTDKNSPIKSPQESLLDKKH 1272
            F SP LFT   +K  SETE ++SPTS L+  L   L N FW + NSP    +  L + K 
Sbjct: 28   FGSPRLFTSSSSKGLSETEAVMSPTSILEPFL--GLRNSFWGESNSP----RTQLTESKR 81

Query: 1271 PWVKKLDSRGVGLGIVDALNDEGSDMKLSKPDSRMVLFGSQLKIQIPPLSQVPPPETEYL 1092
            PW    DS+G+GL IVD L +E SD K SKPD+RMV+ GSQLKIQIPPL     P  +  
Sbjct: 82   PW----DSKGIGLAIVDGLTEENSDPKPSKPDTRMVVLGSQLKIQIPPLPPFVSPTDDSP 137

Query: 1091 QSPADFGIKTRNTQLEMXXXXXXXXXXXXXXXXXXFEYFNSGIGG-----SPRVFSGRLS 927
             SP +FGIKTRN+ L                       F S   G     SP VF+G LS
Sbjct: 138  VSPIEFGIKTRNSHL-------GSLSPVSSLSPAKKSAFGSSSSGQETPNSPLVFTGCLS 190

Query: 926  ASVMESSEEYTCVITHGPNPKTTHIFDDCIVEDCCGVVGSSSLGKENSFLSDQVSYPSDD 747
            A  +E SE+YTCVI+HGPNPKTTHIF DC++E  CGV   S + KEN F  D+ S+  ++
Sbjct: 191  AGEIEQSEDYTCVISHGPNPKTTHIFGDCVIESGCGVY--SPVRKENGFFRDRTSFSPEN 248

Query: 746  FLSFCYTCKKNLGQGKDIYIYRGEKAFCSHECRYQEILLEEGMEK 612
            FLSFC  CKKNL QGKDIY+YRGEKAFCS ECRYQE++LEE  E+
Sbjct: 249  FLSFCNNCKKNLEQGKDIYMYRGEKAFCSDECRYQEMMLEEEEEE 293


>ref|XP_002337586.1| predicted protein [Populus trichocarpa] gi|222839623|gb|EEE77946.1|
            predicted protein [Populus trichocarpa]
          Length = 260

 Score =  265 bits (676), Expect = 6e-68
 Identities = 149/277 (53%), Positives = 180/277 (64%), Gaps = 4/277 (1%)
 Frame = -3

Query: 1442 PMLFTGLPTKAFSET-EDLISPTSTLDAMLFSSLPNPFWTDKNSPIKSPQESLLDKKHPW 1266
            P L T    K FSET E ++SPTS LD+  FS L NPFW D N   K+P+    + +  W
Sbjct: 21   PKLLTAFTFKNFSETSEAIMSPTSILDSKPFSGLKNPFWPDPNPSPKTPEP---ETRRHW 77

Query: 1265 VKKLDSRGVGLGIVDALNDEGSDMKLSKPDSRMVLFGSQLKIQIPPLSQVPPPETEYL-Q 1089
              KLD++G+GLGIVDAL+DE +D  LSKP+SR VLFGSQLKIQIPP        T+   +
Sbjct: 78   -DKLDAKGIGLGIVDALDDEKTDSNLSKPESRTVLFGSQLKIQIPPFPPSFLSTTDQSPK 136

Query: 1088 SPADFGIKTRNTQLEMXXXXXXXXXXXXXXXXXXFEYFNSGIGGSPRVFSGRLSASVMES 909
            SPA+ G++T N                                 SPRVF+G LSAS ME 
Sbjct: 137  SPANSGMETPN---------------------------------SPRVFAGCLSASEMEL 163

Query: 908  SEEYTCVITHGPNPKTTHIFDDCIVEDCCGVVGSSSLGKE--NSFLSDQVSYPSDDFLSF 735
            SE+YTCVITHGP P+TTHIFD+CIVE CCG VG S+  ++  N FL D ++Y SD FLSF
Sbjct: 164  SEDYTCVITHGPVPRTTHIFDNCIVESCCGAVGFSASSRKDNNRFLGDGLTYRSDSFLSF 223

Query: 734  CYTCKKNLGQGKDIYIYRGEKAFCSHECRYQEILLEE 624
            C +CKKNL QGKDIYIYRGE+AFCS+ECRYQ +LLEE
Sbjct: 224  CSSCKKNLEQGKDIYIYRGERAFCSNECRYQVMLLEE 260


Top