BLASTX nr result

ID: Coptis21_contig00000617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000617
         (1901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277195.2| PREDICTED: uncharacterized protein LOC100262...   271   6e-70
emb|CBI27136.3| unnamed protein product [Vitis vinifera]              271   6e-70
ref|XP_002527136.1| nucleic acid binding protein, putative [Rici...   243   2e-61
ref|XP_003540672.1| PREDICTED: uncharacterized protein LOC100779...   242   3e-61
ref|XP_003537777.1| PREDICTED: uncharacterized protein LOC100786...   239   2e-60

>ref|XP_002277195.2| PREDICTED: uncharacterized protein LOC100262769 [Vitis vinifera]
          Length = 664

 Score =  271 bits (692), Expect = 6e-70
 Identities = 140/232 (60%), Positives = 185/232 (79%), Gaps = 6/232 (2%)
 Frame = -2

Query: 757  EDEQPAKTVKKNDTDVEMKDAQSP--KTNNKQAKLDNKTPATPQVPSNVTNTLFVGNLPF 584
            ++E+P+KT KKN TDVEM DA++P  +T++K  K   KTPATPQV S  + TLFVGNL F
Sbjct: 352  DEEEPSKTPKKNGTDVEMVDAETPAKQTDSKSGKKAPKTPATPQVESTGSKTLFVGNLSF 411

Query: 583  SAQKEDVEAFFKDAGEVVDVRFTLNEEGRPKGYAHAEFASEEDAQKAMELNGQELYGREL 404
            S QKEDVE FFKDAGEVVDVRF+ + +GR KG+ H EFA+ E AQKA+++NG++L GR +
Sbjct: 412  SVQKEDVEHFFKDAGEVVDVRFSSDADGRFKGFGHVEFATPEAAQKALKMNGKDLLGRAV 471

Query: 403  RLDYSKPRGSFNTPQSGK-TNSYQKGG-QSFTVFVRGFDTSGEPHKVESTLQEHFASCGE 230
            RLD ++ RG++ TP SGK +NS+QKGG Q+ T+FVRGFD SG+  +V STL+E+F SCG+
Sbjct: 472  RLDLARERGAY-TPYSGKESNSFQKGGSQAQTIFVRGFDKSGDEDQVRSTLEEYFGSCGD 530

Query: 229  ISRVSLPKDYESGALKGFAYVEFADRASLSKALELDGS--GDYPLSVEEARP 80
            ISR+S+PKDYESG++KG AY++F D  S +KALEL+G+  G Y L+VEEA+P
Sbjct: 531  ISRISIPKDYESGSVKGIAYMDFTDGDSFNKALELNGTELGGYTLNVEEAKP 582


>emb|CBI27136.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score =  271 bits (692), Expect = 6e-70
 Identities = 140/232 (60%), Positives = 185/232 (79%), Gaps = 6/232 (2%)
 Frame = -2

Query: 757  EDEQPAKTVKKNDTDVEMKDAQSP--KTNNKQAKLDNKTPATPQVPSNVTNTLFVGNLPF 584
            ++E+P+KT KKN TDVEM DA++P  +T++K  K   KTPATPQV S  + TLFVGNL F
Sbjct: 398  DEEEPSKTPKKNGTDVEMVDAETPAKQTDSKSGKKAPKTPATPQVESTGSKTLFVGNLSF 457

Query: 583  SAQKEDVEAFFKDAGEVVDVRFTLNEEGRPKGYAHAEFASEEDAQKAMELNGQELYGREL 404
            S QKEDVE FFKDAGEVVDVRF+ + +GR KG+ H EFA+ E AQKA+++NG++L GR +
Sbjct: 458  SVQKEDVEHFFKDAGEVVDVRFSSDADGRFKGFGHVEFATPEAAQKALKMNGKDLLGRAV 517

Query: 403  RLDYSKPRGSFNTPQSGK-TNSYQKGG-QSFTVFVRGFDTSGEPHKVESTLQEHFASCGE 230
            RLD ++ RG++ TP SGK +NS+QKGG Q+ T+FVRGFD SG+  +V STL+E+F SCG+
Sbjct: 518  RLDLARERGAY-TPYSGKESNSFQKGGSQAQTIFVRGFDKSGDEDQVRSTLEEYFGSCGD 576

Query: 229  ISRVSLPKDYESGALKGFAYVEFADRASLSKALELDGS--GDYPLSVEEARP 80
            ISR+S+PKDYESG++KG AY++F D  S +KALEL+G+  G Y L+VEEA+P
Sbjct: 577  ISRISIPKDYESGSVKGIAYMDFTDGDSFNKALELNGTELGGYTLNVEEAKP 628


>ref|XP_002527136.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223533496|gb|EEF35238.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 642

 Score =  243 bits (619), Expect = 2e-61
 Identities = 131/232 (56%), Positives = 165/232 (71%), Gaps = 6/232 (2%)
 Frame = -2

Query: 757  EDEQPAKTVKKNDTDVEMKDAQSPKTNNKQAKLDNKTPATPQVPSNVTNTLFVGNLPFSA 578
            EDE+P+KT KK DTDV+M DA    T  K      KTP TPQV S  + TLFVGNLPF  
Sbjct: 344  EDEKPSKTPKKKDTDVKMVDATPQATTKKP-----KTPVTPQVQSTGSKTLFVGNLPFQV 398

Query: 577  QKEDVEAFFKDAGEVVDVRFTLNEEGRPKGYAHAEFASEEDAQKAMELNGQELYGRELRL 398
            ++ DVE FFK AGEVVDVRF L+++ R KG+ H EFA+ E A +A++LNGQ L GRE+RL
Sbjct: 399  ERADVEDFFKGAGEVVDVRFALDQDQRFKGFGHVEFATIEAAHEALKLNGQSLNGREVRL 458

Query: 397  DYSKPRG--SFNTPQSGKTNSYQKGGQSFT--VFVRGFDTSGEPHKVESTLQEHFASCGE 230
            D ++ RG  +  TP SGK NS+QKGG+S T  +FVRGFD      ++ ++L EHF +CGE
Sbjct: 459  DLARERGERAPYTPYSGKDNSFQKGGRSQTQKIFVRGFDKFLGEDEIRNSLGEHFKTCGE 518

Query: 229  ISRVSLPKDYESGALKGFAYVEFADRASLSKALELDGS--GDYPLSVEEARP 80
            I+R+SLP DYE+GA+KG AYVEF D    +KALE +GS  GD  L+VEEA+P
Sbjct: 519  ITRISLPTDYETGAIKGMAYVEFQDATGFNKALEFNGSQLGDQYLTVEEAKP 570


>ref|XP_003540672.1| PREDICTED: uncharacterized protein LOC100779929 [Glycine max]
          Length = 744

 Score =  242 bits (617), Expect = 3e-61
 Identities = 128/229 (55%), Positives = 163/229 (71%), Gaps = 4/229 (1%)
 Frame = -2

Query: 754  DEQPAKTVKKNDTDVEMKDAQSPKTNNKQAKLDNKTPATPQVPSNVTNTLFVGNLPFSAQ 575
            +E+P+KT +K D DVEM DA S        K   KTP TP+  +  + TLFVGNLPFS +
Sbjct: 433  EEEPSKTPQKRDRDVEMVDAAS------SGKKAPKTPVTPKEETGASKTLFVGNLPFSVE 486

Query: 574  KEDVEAFFKDAGEVVDVRFTLNEEGRPKGYAHAEFASEEDAQKAMELNGQELYGRELRLD 395
            + DVE FFKDAGEVVDVRF  ++ G+ KG+ H EFA+   AQKA+ LNGQ+L+ RELRLD
Sbjct: 487  RADVEDFFKDAGEVVDVRFATDDTGKFKGFGHVEFATAAAAQKALGLNGQQLFNRELRLD 546

Query: 394  YSKPRGSFNTPQSGKTNSYQKG--GQSFTVFVRGFDTSGEPHKVESTLQEHFASCGEISR 221
             ++ RG++    S   NS QK   GQS TVFVRGFDTS    ++  +LQEHF SCG+I+R
Sbjct: 547  LARERGAYTPNSSNWNNSSQKSGRGQSQTVFVRGFDTSLGEDEIRGSLQEHFGSCGDITR 606

Query: 220  VSLPKDYESGALKGFAYVEFADRASLSKALELDGS--GDYPLSVEEARP 80
            VS+PKDYESGA+KGFAYV+F+D  S+ KALEL  +  G Y L+V+EA+P
Sbjct: 607  VSIPKDYESGAVKGFAYVDFSDVDSMGKALELHETELGGYTLTVDEAKP 655


>ref|XP_003537777.1| PREDICTED: uncharacterized protein LOC100786132 [Glycine max]
          Length = 748

 Score =  239 bits (610), Expect = 2e-60
 Identities = 127/229 (55%), Positives = 163/229 (71%), Gaps = 4/229 (1%)
 Frame = -2

Query: 754  DEQPAKTVKKNDTDVEMKDAQSPKTNNKQAKLDNKTPATPQVPSNVTNTLFVGNLPFSAQ 575
            +E+P+KT +K   DVEM DA     + K+A    KTP TP+  S  + TLFVGNLPFS +
Sbjct: 438  EEKPSKTPQKRGRDVEMVDAA---LSEKKAP---KTPVTPREESGTSKTLFVGNLPFSVE 491

Query: 574  KEDVEAFFKDAGEVVDVRFTLNEEGRPKGYAHAEFASEEDAQKAMELNGQELYGRELRLD 395
            + DVE FFKDAGEVVDVRF  ++ G+ KG+ H EFA+ E AQ A+ LNGQ+L+ RELRLD
Sbjct: 492  RADVEGFFKDAGEVVDVRFATDDTGKFKGFGHVEFATAEAAQNALGLNGQQLFNRELRLD 551

Query: 394  YSKPRGSFNTPQSGKTNSYQKG--GQSFTVFVRGFDTSGEPHKVESTLQEHFASCGEISR 221
             ++ RG++    S   NS QK   GQS T+FVRGFDTS    ++  +LQEHF SCG+I+R
Sbjct: 552  LARERGAYTPNSSNWNNSSQKSERGQSQTIFVRGFDTSLGEDEIRGSLQEHFGSCGDITR 611

Query: 220  VSLPKDYESGALKGFAYVEFADRASLSKALELDGS--GDYPLSVEEARP 80
            VS+PKDYESGA+KGFAYV+F D  S+ KALEL  +  G Y L+V+EA+P
Sbjct: 612  VSIPKDYESGAVKGFAYVDFGDADSMGKALELHETELGGYTLTVDEAKP 660


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