BLASTX nr result

ID: Coptis21_contig00000604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000604
         (1673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519518.1| hypothetical protein RCOM_1355450 [Ricinus c...   383   e-104
ref|XP_002326188.1| predicted protein [Populus trichocarpa] gi|2...   366   9e-99
ref|XP_002322887.1| predicted protein [Populus trichocarpa] gi|2...   361   3e-97
emb|CAN82586.1| hypothetical protein VITISV_033047 [Vitis vinifera]   346   1e-92
ref|XP_002281865.1| PREDICTED: uncharacterized protein LOC100258...   326   1e-86

>ref|XP_002519518.1| hypothetical protein RCOM_1355450 [Ricinus communis]
            gi|223541381|gb|EEF42932.1| hypothetical protein
            RCOM_1355450 [Ricinus communis]
          Length = 465

 Score =  383 bits (983), Expect = e-104
 Identities = 216/409 (52%), Positives = 266/409 (65%), Gaps = 40/409 (9%)
 Frame = -3

Query: 1497 DEDPSLKSLLTHLDLSGKNAKXXXXXXSNHHTRRGGRPFLQLSRVGTLXXXXXXXXXXXD 1318
            D DPSLKSLL+ LDL+G +         +   RR  RPFL L+RVGTL           D
Sbjct: 59   DRDPSLKSLLSRLDLAGNHHHHHHHPAHHLPPRRHRRPFLHLTRVGTLDDDFFSGDDDTD 118

Query: 1317 RQLLGIGKKLAVNGSTVNLSNFG-KLGFY------GFQFXXXXXXXXXXXXEG-----NE 1174
            R +    +KL+ NGS+V L NF  KLGF       G +             EG     ++
Sbjct: 119  RSIFNPNRKLSPNGSSVILYNFDPKLGFSDLVTDGGLKIHGMVRSGVQLKIEGLPNNYSD 178

Query: 1173 DRLSE---------------------------GVELGRRDAAMLMFLVSFLSAVYGWVIL 1075
            D  SE                           G+E+GRRDAA L FLVSFLSA YGWVIL
Sbjct: 179  DNESENNEIEEEESVEKDEDLDRIVDFEFFIKGLEIGRRDAAALFFLVSFLSAAYGWVIL 238

Query: 1074 GFVVVNTCIVGVVFYSVVSNSYLGRYDNSFVGTVWAGCRLGARRLSGFILMRWAIRDAMT 895
            GF V+ + I+GVVF +VV N  LG++ NSFVG +W G +LG +RL+GFILMRWA+RDA+T
Sbjct: 239  GFTVIYSWILGVVFVAVVYN-LLGKF-NSFVGVIWDGSKLGLKRLTGFILMRWAVRDALT 296

Query: 894  QIIGVCFFGEIEDQHSFFKIFVRLKLMPFSITFPWIRGYELEISRFLFTWILSDTVVGLV 715
            Q+IG+ +FGEIEDQ+SFFK+FVRLKLMPFSI  PWIRG+E EIS FLFTW L D VV  +
Sbjct: 297  QLIGLWYFGEIEDQYSFFKLFVRLKLMPFSIMSPWIRGFEKEISGFLFTWFLLDAVVAFI 356

Query: 714  FAVDYWVAIMDARR-GREILKEGFYLLSTMMSQAISLKGYEAFFCSSYVRWVLTRIFGNL 538
            FAVD WV I+D+RR GREI++EG YL+STM +QAI LK  E+  C S  RWVLTR+FG  
Sbjct: 357  FAVDAWVTIVDSRRTGREIVREGCYLISTMFNQAIQLKSMESILCGSAARWVLTRVFGKF 416

Query: 537  FASMFQSVVEVYFMVVWLIYYFSAKSKDASADGRRFERKDLEDYIDGLR 391
             A+  QS +EVYFMVVWLI+YF+A+ KDA ++GRRF R++LE  IDGLR
Sbjct: 417  LAAFLQSTLEVYFMVVWLIFYFAARCKDAHSEGRRFGRRELEGLIDGLR 465


>ref|XP_002326188.1| predicted protein [Populus trichocarpa] gi|222833381|gb|EEE71858.1|
            predicted protein [Populus trichocarpa]
          Length = 467

 Score =  366 bits (940), Expect = 9e-99
 Identities = 211/413 (51%), Positives = 251/413 (60%), Gaps = 44/413 (10%)
 Frame = -3

Query: 1497 DEDPSLKSLLTHLDLSGKNAKXXXXXXSNHHTRRGGRPFLQLSRVGTLXXXXXXXXXXXD 1318
            D DPSLKSLL+ LDL+G+          +    R  RPFL L+RVGTL           D
Sbjct: 60   DRDPSLKSLLSRLDLAGQPHPSHPHHRIHTRLPRRRRPFLHLTRVGTLDDDFFSADDEAD 119

Query: 1317 RQLLGIGKKLAVNGSTVNLSNFG-KLGFY----------------GFQFXXXXXXXXXXX 1189
              L     K   NGS V L NF  K GF                 G QF           
Sbjct: 120  SSLF---PKFPPNGSFVILHNFDPKFGFSDLVIDNGIKVPEIVRSGIQFKAAEENHSFLD 176

Query: 1188 XEGN--------------------EDR------LSEGVELGRRDAAMLMFLVSFLSAVYG 1087
             + N                    ED+      L +G+ELGRRD A L FLVSFLSA YG
Sbjct: 177  SKNNNNEIESSSEDFNNNESGKEGEDKILDLQFLVKGLELGRRDTAALFFLVSFLSAAYG 236

Query: 1086 WVILGFVVVNTCIVGVVFYSVVSNSYLGRYDNSFVGTVWAGCRLGARRLSGFILMRWAIR 907
            WVILGF  + + I+GVVF  VV N  LGRY  SF+G VW G RLG++RL+GFILMRWA+R
Sbjct: 237  WVILGFTAIYSWILGVVFIVVV-NDLLGRY-GSFIGVVWNGSRLGSKRLAGFILMRWAVR 294

Query: 906  DAMTQIIGVCFFGEIEDQHSFFKIFVRLKLMPFSITFPWIRGYELEISRFLFTWILSDTV 727
            DA+TQ++G+ FFGEIEDQ+SFFK+FVRLKLMPFS+ FPWI G++ EIS F  TW+L D V
Sbjct: 295  DALTQLVGLWFFGEIEDQYSFFKLFVRLKLMPFSVMFPWINGFDKEISGFFVTWMLVDVV 354

Query: 726  VGLVFAVDYWVAIMDARR-GREILKEGFYLLSTMMSQAISLKGYEAFFCSSYVRWVLTRI 550
            VG +FAVD WV ++D RR GREILKEG YL+STM  QA+ LK YE   C S  RWV  R+
Sbjct: 355  VGFIFAVDAWVTVVDTRRTGREILKEGCYLISTMFHQAVQLKCYEEILCGSAARWVFARV 414

Query: 549  FGNLFASMFQSVVEVYFMVVWLIYYFSAKSKDASADGRRFERKDLEDYIDGLR 391
            FG  FA + QS  EVYFMV WLI+YF A+ K+A +DGRRF R++LE  IDGLR
Sbjct: 415  FGKFFAILLQSAFEVYFMVAWLIFYFVARCKEADSDGRRFGRRELEVLIDGLR 467


>ref|XP_002322887.1| predicted protein [Populus trichocarpa] gi|222867517|gb|EEF04648.1|
            predicted protein [Populus trichocarpa]
          Length = 461

 Score =  361 bits (927), Expect = 3e-97
 Identities = 205/412 (49%), Positives = 252/412 (61%), Gaps = 43/412 (10%)
 Frame = -3

Query: 1497 DEDPSLKSLLTHLDLSGKNAKXXXXXXSNHHTRRGGRPFLQLSRVGTLXXXXXXXXXXXD 1318
            D DPSLKSLL+ LDL+G++         +H   R  RPFL L+RVGTL           D
Sbjct: 60   DRDPSLKSLLSRLDLAGRH-----HHRIHHPLPRRRRPFLHLTRVGTLDDDFFSADEESD 114

Query: 1317 RQLLGIGKKLAVNGSTVNLSNFG-KLGFY----------------GFQFXXXXXXXXXXX 1189
              L     K   N S V L NF  K GF                 G QF           
Sbjct: 115  SPLF---PKFPPNRSFVILHNFDPKFGFSDAVIDNGIKVPEIVRSGIQFKAAEEIHSYVD 171

Query: 1188 XEGNEDR-------------------------LSEGVELGRRDAAMLMFLVSFLSAVYGW 1084
               +++                          L +G+ELGRRDA  L FLVSFLSA YGW
Sbjct: 172  NTNHDNDEDSERSREDFNSKENGEEKIVGLQFLVKGLELGRRDATALFFLVSFLSAAYGW 231

Query: 1083 VILGFVVVNTCIVGVVFYSVVSNSYLGRYDNSFVGTVWAGCRLGARRLSGFILMRWAIRD 904
            VILGF  + + ++G+VF  VV N  LGRY  SF+G VW G RLG++RL+GFILMRWA+RD
Sbjct: 232  VILGFTAIYSWVLGIVFVVVV-NDLLGRY-GSFIGVVWDGSRLGSKRLAGFILMRWAVRD 289

Query: 903  AMTQIIGVCFFGEIEDQHSFFKIFVRLKLMPFSITFPWIRGYELEISRFLFTWILSDTVV 724
            A+TQ++G+ FFGEIEDQ+SFFK+F+RLKLMPFSI  PWI G+E EISRFL  W+L D VV
Sbjct: 290  ALTQLVGLWFFGEIEDQYSFFKLFIRLKLMPFSIMLPWINGFEKEISRFLVIWMLLDLVV 349

Query: 723  GLVFAVDYWVAIMDARR-GREILKEGFYLLSTMMSQAISLKGYEAFFCSSYVRWVLTRIF 547
            G +FAVD WV ++D RR GREILKEG YL+STM +QA+ +K YE   C S  RWV +R+F
Sbjct: 350  GFIFAVDAWVTVVDTRRTGREILKEGCYLISTMFNQAVQIKCYEEILCGSAARWVFSRVF 409

Query: 546  GNLFASMFQSVVEVYFMVVWLIYYFSAKSKDASADGRRFERKDLEDYIDGLR 391
            G   A++ QS  EVYFMV WLI+YF A+ K+A +DGRRF R++LE  IDGLR
Sbjct: 410  GKFLATLLQSTFEVYFMVAWLIFYFVARCKEADSDGRRFGRRELEGLIDGLR 461


>emb|CAN82586.1| hypothetical protein VITISV_033047 [Vitis vinifera]
          Length = 471

 Score =  346 bits (887), Expect = 1e-92
 Identities = 191/370 (51%), Positives = 239/370 (64%), Gaps = 1/370 (0%)
 Frame = -3

Query: 1497 DEDPSLKSLLTHLDLSGKNAKXXXXXXSNHHTRRGGRPFLQLSRVGTLXXXXXXXXXXXD 1318
            D DPSL++LL+ LD++G +              R G  F      G L            
Sbjct: 140  DRDPSLRALLSRLDIAGFSGSVEDNGIRASEIVRSGFSF---KGEGLLFTDGNDDDGDEG 196

Query: 1317 RQLLGIGKKLAVNGSTVNLSNFGKLGFYGFQFXXXXXXXXXXXXEGNEDRLSEGVELGRR 1138
             Q             TV L N  + G + F                      +G++LG R
Sbjct: 197  NQ-------------TVVLENKEERGDFPF--------------------FIKGMDLGSR 223

Query: 1137 DAAMLMFLVSFLSAVYGWVILGFVVVNTCIVGVVFYSVVSNSYLGRYDNSFVGTVWAGCR 958
            D+A L FLV FLSA YGWVILGF+V  + ++G+VF SVV N +L R   SF+GTVW G R
Sbjct: 224  DSAALFFLVCFLSAAYGWVILGFLVTYSWVLGIVFISVV-NDHLRR-TTSFIGTVWDGSR 281

Query: 957  LGARRLSGFILMRWAIRDAMTQIIGVCFFGEIEDQHSFFKIFVRLKLMPFSITFPWIRGY 778
            LG RRLSGFILMRWA+RD MTQ++G+ FFGEIEDQ+SFFK+FVRLKLMPFS+  PWIRG+
Sbjct: 282  LGLRRLSGFILMRWAVRDGMTQLLGLWFFGEIEDQYSFFKLFVRLKLMPFSVMLPWIRGF 341

Query: 777  ELEISRFLFTWILSDTVVGLVFAVDYWVAIMDARR-GREILKEGFYLLSTMMSQAISLKG 601
            E EIS FLF W L DT+V  +FAVD WVAI+D RR GR+I++EG YLLSTM++QAI +K 
Sbjct: 342  EKEISGFLFIWFLWDTLVSFIFAVDAWVAIVDTRRSGRDIVREGVYLLSTMLNQAIQIKC 401

Query: 600  YEAFFCSSYVRWVLTRIFGNLFASMFQSVVEVYFMVVWLIYYFSAKSKDASADGRRFERK 421
             EA FC S+VRW L R  G LFA++FQSVVEVYFMV WLI+YF+A+ + AS +GRRF R+
Sbjct: 402  LEAIFCGSFVRWALARFCGKLFAAVFQSVVEVYFMVAWLIFYFAARCRVASTEGRRFGRR 461

Query: 420  DLEDYIDGLR 391
            +LE +I+GLR
Sbjct: 462  ELEGFIEGLR 471


>ref|XP_002281865.1| PREDICTED: uncharacterized protein LOC100258485 [Vitis vinifera]
          Length = 426

 Score =  326 bits (836), Expect = 1e-86
 Identities = 191/404 (47%), Positives = 241/404 (59%), Gaps = 35/404 (8%)
 Frame = -3

Query: 1497 DEDPSLKSLLTHLDLSGKNAKXXXXXXSNHHTRRGGRPFLQLSRVGTLXXXXXXXXXXXD 1318
            D DPSL++LL+ LD++GKN           + R   RPFL L+RVGTL           D
Sbjct: 60   DRDPSLRALLSRLDIAGKNIPATLSSPPTVNPRHRRRPFLHLTRVGTLDDDFFSGDEYDD 119

Query: 1317 RQLLGIGKKLAVNGSTVNLSNFG-KLGFYG------------FQFXXXXXXXXXXXXEGN 1177
            R L G G++  +NGS ++LS F  KLGF G             +             +GN
Sbjct: 120  RTLFGGGRRTQINGSFLSLSRFDPKLGFSGSVEDNGIRASEIVRSGFSFKGEGLLFTDGN 179

Query: 1176 EDRLSEG---------------------VELGRRDAAMLMFLVSFLSAVYGWVILGFVVV 1060
            +D   EG                     ++LG RD+A L FLV FLSA YGWVILGF+V 
Sbjct: 180  DDDGDEGNQTVVLENKEERGDFPFFIKGMDLGSRDSAALFFLVCFLSAAYGWVILGFLVT 239

Query: 1059 NTCIVGVVFYSVVSNSYLGRYDNSFVGTVWAGCRLGARRLSGFILMRWAIRDAMTQIIGV 880
             + ++G+VF SVV N +L R   SF+GTVW G RLG RRLSGFILMRWA+RD MTQ++G+
Sbjct: 240  YSWVLGIVFISVV-NDHLRR-TTSFIGTVWDGSRLGLRRLSGFILMRWAVRDGMTQLLGL 297

Query: 879  CFFGEIEDQHSFFKIFVRLKLMPFSITFPWIRGYELEISRFLFTWILSDTVVGLVFAVDY 700
             FFGEIEDQ+SFFK+FVRLKLMPFS+  PWIRG+E EIS FLF W L DT+V  +FAVD 
Sbjct: 298  WFFGEIEDQYSFFKLFVRLKLMPFSVMLPWIRGFEKEISGFLFIWFLWDTLVSFIFAVDA 357

Query: 699  WVAIMDARR-GREILKEGFYLLSTMMSQAISLKGYEAFFCSSYVRWVLTRIFGNLFASMF 523
            WVAI+D RR GR+I++E                                   G LFA++F
Sbjct: 358  WVAIVDTRRSGRDIVRE-----------------------------------GKLFAAVF 382

Query: 522  QSVVEVYFMVVWLIYYFSAKSKDASADGRRFERKDLEDYIDGLR 391
            QSVVEVYFMV WLI+YF+A+ + AS +GRRF R++LE +I+GLR
Sbjct: 383  QSVVEVYFMVAWLIFYFAARCRVASTEGRRFGRRELEGFIEGLR 426


Top