BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000602
         (1092 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   213   9e-53
ref|XP_002509838.1| zinc finger protein, putative [Ricinus commu...   204   2e-50
ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   199   1e-48
gb|AFK38566.1| unknown [Medicago truncatula]                          192   1e-46
gb|AFK46654.1| unknown [Lotus japonicus]                              191   3e-46

>ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Vitis vinifera]
          Length = 168

 Score =  213 bits (541), Expect = 9e-53
 Identities = 108/169 (63%), Positives = 122/169 (72%), Gaps = 1/169 (0%)
 Frame = -1

Query: 960 MGFPVGYTEXXXXXXXXXXXXXLGYVRKLISWLFQTLGLGDFLESDIAWXXXXXXXXSTT 781
           MGFPVGYTE             LG++RKLIS+ F+ LGL DFLE DI W           
Sbjct: 1   MGFPVGYTELLLPKLLLHTLSLLGFIRKLISYFFRFLGLTDFLEPDIVWTE--------- 51

Query: 780 YGNNSHVSEFNSVSAVLIREFLPVVKFQDLDCCDTLIP-DSCAVCLYEFEGKEEIRRLTN 604
              ++ V EF SVSAVLIRE LPV+KF++L       P D CAVCLYEFEG+EEIRRLTN
Sbjct: 52  --GSTQVPEFQSVSAVLIREILPVMKFEELVGAGAGDPPDQCAVCLYEFEGQEEIRRLTN 109

Query: 603 CRHIFHRICLDRWMDHDQRTCPLCRTPFIPDDMQESFNERLWAASSVPD 457
           CRHIFHR CLDRWMD DQ+TCPLCRTPFIPDDMQE+FNERLWAAS++PD
Sbjct: 110 CRHIFHRSCLDRWMDCDQKTCPLCRTPFIPDDMQEAFNERLWAASALPD 158


>ref|XP_002509838.1| zinc finger protein, putative [Ricinus communis]
           gi|223549737|gb|EEF51225.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 164

 Score =  204 bits (520), Expect = 2e-50
 Identities = 105/168 (62%), Positives = 117/168 (69%)
 Frame = -1

Query: 960 MGFPVGYTEXXXXXXXXXXXXXLGYVRKLISWLFQTLGLGDFLESDIAWXXXXXXXXSTT 781
           MGFPVGYTE             LG++RKLI+ LF+ LGL DFLE DI+W           
Sbjct: 1   MGFPVGYTELLLPKLLIHTLSILGFIRKLINTLFRYLGLPDFLEPDISWPETP------- 53

Query: 780 YGNNSHVSEFNSVSAVLIREFLPVVKFQDLDCCDTLIPDSCAVCLYEFEGKEEIRRLTNC 601
               S V EF S SAVLIRE LPVVKF DL       PDSCAVCLYEFE  +EIRRLTNC
Sbjct: 54  ----SRVPEFYSASAVLIREILPVVKFSDL----VDPPDSCAVCLYEFEDHDEIRRLTNC 105

Query: 600 RHIFHRICLDRWMDHDQRTCPLCRTPFIPDDMQESFNERLWAASSVPD 457
           RHIFH+ CLDRW+ +DQ+TCPLCRTP IPDDMQE+FNERLWAAS +PD
Sbjct: 106 RHIFHKACLDRWVGYDQKTCPLCRTPVIPDDMQEAFNERLWAASGIPD 153


>ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 167

 Score =  199 bits (505), Expect = 1e-48
 Identities = 98/168 (58%), Positives = 116/168 (69%)
 Frame = -1

Query: 960 MGFPVGYTEXXXXXXXXXXXXXLGYVRKLISWLFQTLGLGDFLESDIAWXXXXXXXXSTT 781
           MGFPVGYTE             LG++RKLI  LF  LGL DFLE+D++W           
Sbjct: 1   MGFPVGYTEVFLPKLFLHTLSFLGFIRKLIFSLFHFLGLSDFLETDVSWSE--------- 51

Query: 780 YGNNSHVSEFNSVSAVLIREFLPVVKFQDLDCCDTLIPDSCAVCLYEFEGKEEIRRLTNC 601
               + V E+  VSAVLIRE LPV+KF +  C     P+SCAVCLY+FE  EEIRRLTNC
Sbjct: 52  --TQAQVPEYPPVSAVLIREILPVMKFGEAVCGGDA-PESCAVCLYDFEVGEEIRRLTNC 108

Query: 600 RHIFHRICLDRWMDHDQRTCPLCRTPFIPDDMQESFNERLWAASSVPD 457
           +HIFHR CLDRWMDHDQ+TCPLCRTPF+PD+MQ+ FN+RLWAAS + D
Sbjct: 109 KHIFHRSCLDRWMDHDQKTCPLCRTPFVPDEMQDEFNQRLWAASGITD 156


>gb|AFK38566.1| unknown [Medicago truncatula]
          Length = 163

 Score =  192 bits (488), Expect = 1e-46
 Identities = 95/168 (56%), Positives = 115/168 (68%)
 Frame = -1

Query: 960 MGFPVGYTEXXXXXXXXXXXXXLGYVRKLISWLFQTLGLGDFLESDIAWXXXXXXXXSTT 781
           MGFPVGYTE               ++RKLI+ +F+ +GL DF+E DI W           
Sbjct: 1   MGFPVGYTELLFPKLVLHLLSIFTFIRKLINTIFRYMGLPDFIEPDIIWPE--------- 51

Query: 780 YGNNSHVSEFNSVSAVLIREFLPVVKFQDLDCCDTLIPDSCAVCLYEFEGKEEIRRLTNC 601
             N++ + EF SVSA+LIRE LPVVKF +L       P+SCAVCL EFE  +EIRRL NC
Sbjct: 52  --NSTRIPEFESVSALLIREILPVVKFMEL----VDPPESCAVCLTEFEENDEIRRLANC 105

Query: 600 RHIFHRICLDRWMDHDQRTCPLCRTPFIPDDMQESFNERLWAASSVPD 457
           RHIFHR CLDRWM +DQRTCPLCRTPFIPD++Q +FNERLWAAS +P+
Sbjct: 106 RHIFHRGCLDRWMGYDQRTCPLCRTPFIPDELQSAFNERLWAASGIPE 153


>gb|AFK46654.1| unknown [Lotus japonicus]
          Length = 167

 Score =  191 bits (485), Expect = 3e-46
 Identities = 96/168 (57%), Positives = 114/168 (67%)
 Frame = -1

Query: 960 MGFPVGYTEXXXXXXXXXXXXXLGYVRKLISWLFQTLGLGDFLESDIAWXXXXXXXXSTT 781
           MGFPVGYTE             LG++RKL+  LF+ LGL DFLE DI W           
Sbjct: 1   MGFPVGYTEFLFPKLVLQILSLLGFIRKLVCTLFRYLGLPDFLEPDIVWPD--------- 51

Query: 780 YGNNSHVSEFNSVSAVLIREFLPVVKFQDLDCCDTLIPDSCAVCLYEFEGKEEIRRLTNC 601
             N++ + EF SVSA+LIRE LPVVKF++L       P+SC VCL EFE  +EIRRL NC
Sbjct: 52  --NSTRIPEFESVSALLIREILPVVKFREL----VDPPESCVVCLSEFEESDEIRRLANC 105

Query: 600 RHIFHRICLDRWMDHDQRTCPLCRTPFIPDDMQESFNERLWAASSVPD 457
           RHIFHR CLDRW+ +DQ TCPLCRTP IPD+MQ +FNERLWAAS +P+
Sbjct: 106 RHIFHRACLDRWVGYDQSTCPLCRTPLIPDEMQGAFNERLWAASGIPE 153