BLASTX nr result

ID: Coptis21_contig00000601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000601
         (887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309990.1| predicted protein [Populus trichocarpa] gi|2...   145   1e-32
ref|XP_002528969.1| chaperone protein DNAj, putative [Ricinus co...   140   5e-31
ref|XP_002337037.1| predicted protein [Populus trichocarpa] gi|2...   134   4e-29
ref|XP_002306321.1| predicted protein [Populus trichocarpa] gi|2...   117   3e-24
ref|XP_003531554.1| PREDICTED: dnaJ-like protein R260-like [Glyc...   103   7e-20

>ref|XP_002309990.1| predicted protein [Populus trichocarpa] gi|222852893|gb|EEE90440.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  145 bits (366), Expect = 1e-32
 Identities = 76/151 (50%), Positives = 104/151 (68%), Gaps = 4/151 (2%)
 Frame = +3

Query: 255 SKQVPMFSTRRSMHRTSRPNLISCRASTLETK-RVGTNFYEVLSLDSENVSFEEVKKAYR 431
           + ++P+   + S  ++ +   I C+ +T E   R   NFYEVLSL S+NV F+E+KKAYR
Sbjct: 12  ANKLPIMMKKWSRQKSYKHRTILCKTATNEVAFRKKMNFYEVLSLGSQNVGFDEIKKAYR 71

Query: 432 SMARQYHPDVVPASRKEESTKKFVELQRAYETLSNPNSRQKYDYEIGLSYRSGFGMTGIR 611
           SMA QYHPDV P S KEESTK+FVELQ+AYETLS+P +R+ YD E+G+    GF   G+ 
Sbjct: 72  SMALQYHPDVCPPSAKEESTKRFVELQKAYETLSDPIARRMYDLELGMVNSVGFAFEGLP 131

Query: 612 SE---ANFHRDVWEDQLQGLESRSHFKMGRK 695
           SE   ++F R+VWE QL GL  RS+ ++ R+
Sbjct: 132 SEDRKSSFPREVWERQLHGLYQRSYARVERR 162


>ref|XP_002528969.1| chaperone protein DNAj, putative [Ricinus communis]
           gi|223531559|gb|EEF33388.1| chaperone protein DNAj,
           putative [Ricinus communis]
          Length = 165

 Score =  140 bits (352), Expect = 5e-31
 Identities = 76/146 (52%), Positives = 101/146 (69%), Gaps = 3/146 (2%)
 Frame = +3

Query: 276 STRRSMHRTSRPNLISCRASTLETKRVGTNFYEVLSLDSENVSFEEVKKAYRSMARQYHP 455
           S ++  H  +R   I+C    ++ K+  TNFYEVLSL S+NV F+E++KAYRSMA Q+HP
Sbjct: 23  SRQKGFHNKART--ITCSYRIMQEKK--TNFYEVLSLQSKNVGFDEIRKAYRSMALQFHP 78

Query: 456 DVVPASRKEESTKKFVELQRAYETLSNPNSRQKYDYEIGLSYRSGFGMTGIRSEA---NF 626
           DV   S KEESTK+FVELQ+AYETLS+P SR+ YDYE+ L    G G+  IR E    +F
Sbjct: 79  DVCRLSAKEESTKRFVELQKAYETLSDPVSRRLYDYELNLVASIGLGLE-IRMEERKNSF 137

Query: 627 HRDVWEDQLQGLESRSHFKMGRKQRR 704
            ++VWE QL GL  RSH ++ RK ++
Sbjct: 138 PKEVWEMQLYGLSQRSHIRLQRKNKK 163


>ref|XP_002337037.1| predicted protein [Populus trichocarpa] gi|222837896|gb|EEE76261.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  134 bits (336), Expect = 4e-29
 Identities = 72/147 (48%), Positives = 97/147 (65%), Gaps = 1/147 (0%)
 Frame = +3

Query: 255 SKQVPMFSTRRSMHRTSRPNLISCRASTLETK-RVGTNFYEVLSLDSENVSFEEVKKAYR 431
           + ++P+   + S  ++ +   I C+ +T E   R   NFYEVLSL S+NV F+E+KKAYR
Sbjct: 12  ANKLPIMMKKWSRQKSYKHRTILCKTATNEVAFRKKMNFYEVLSLGSQNVGFDEIKKAYR 71

Query: 432 SMARQYHPDVVPASRKEESTKKFVELQRAYETLSNPNSRQKYDYEIGLSYRSGFGMTGIR 611
           SMA QYHPDV P S KEESTK+FVELQ+AYETLS+P +R+ YD E+GL            
Sbjct: 72  SMALQYHPDVCPPSAKEESTKRFVELQKAYETLSDPIARRMYDLELGLPSED-------- 123

Query: 612 SEANFHRDVWEDQLQGLESRSHFKMGR 692
            + +F R+VWE QL GL  RS+ ++ R
Sbjct: 124 RKNSFPREVWERQLHGLYQRSYARVER 150


>ref|XP_002306321.1| predicted protein [Populus trichocarpa] gi|222855770|gb|EEE93317.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score =  117 bits (294), Expect = 3e-24
 Identities = 59/112 (52%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
 Frame = +3

Query: 378 LSLDSENVSFEEVKKAYRSMARQYHPDVVPASRKEESTKKFVELQRAYETLSNPNSRQKY 557
           L ++     F+E+KKAYRSMA QYHPDV   S +EESTK+FVELQ+AYETLS+P SR+ +
Sbjct: 5   LQVNLNTARFDEIKKAYRSMALQYHPDVCTPSAREESTKRFVELQKAYETLSDPVSRRMH 64

Query: 558 DYEIGLSYRSGFGMTGIRSE---ANFHRDVWEDQLQGLESRSHFKMGRKQRR 704
           DYE+GL    GF   G+  E     F R+VWE QL GL+ RS+ +M R+  +
Sbjct: 65  DYELGLVNSGGFAFEGLPLEDRKNRFPREVWERQLHGLQQRSYARMERRNNK 116


>ref|XP_003531554.1| PREDICTED: dnaJ-like protein R260-like [Glycine max]
          Length = 171

 Score =  103 bits (256), Expect = 7e-20
 Identities = 63/161 (39%), Positives = 90/161 (55%), Gaps = 5/161 (3%)
 Frame = +3

Query: 231 MMISCQLN-SKQVPMFSTRRSMHRTSRPNL---ISCRASTLETKRVGTNFYEVLSLDSEN 398
           + +S  +N SK     +  +   R   P     +SCR        V  N Y+VLSL  ++
Sbjct: 4   LTLSSSVNISKPFHFLTLSKKQQRERHPRTQFGVSCRGRKELGGGVEDNLYKVLSLSPKS 63

Query: 399 VSFEEVKKAYRSMARQYHPDVV-PASRKEESTKKFVELQRAYETLSNPNSRQKYDYEIGL 575
            + +++KKAYRSMA +YHPDV    S+KEEST+ FV+L  AY+TLSNP  R +YD E+GL
Sbjct: 64  ATTDDIKKAYRSMALRYHPDVCQDCSKKEESTRMFVQLNAAYQTLSNPRLRAEYDCELGL 123

Query: 576 SYRSGFGMTGIRSEANFHRDVWEDQLQGLESRSHFKMGRKQ 698
                    G+  E    R +W++QL  L+ RSH +M + Q
Sbjct: 124 RSEK----IGVGDET--WRYIWQNQLAELKRRSHIRMAQNQ 158


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