BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000600
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like...   172   5e-41
ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloro...   169   8e-40
emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]   169   8e-40
ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|2...   164   1e-38
ref|XP_002868977.1| ribosomal protein L12 family protein [Arabid...   147   2e-33

>ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like [Cucumis sativus]
           gi|449499867|ref|XP_004160938.1| PREDICTED: 50S
           ribosomal protein L7/L12-like [Cucumis sativus]
          Length = 168

 Score =  172 bits (437), Expect = 5e-41
 Identities = 98/146 (67%), Positives = 108/146 (73%), Gaps = 18/146 (12%)
 Frame = +1

Query: 4   LQRSLCTATSTETQTQKLERIADEILHLNKLERHDYQILFGHKLGLNHYGPAISG----- 168
           L RSL T    E +TQKLERIADE+L L K+ERHDY ILF +K+GLN YGPA+SG     
Sbjct: 25  LVRSLSTVA--EERTQKLERIADELLDLTKIERHDYAILFRYKMGLNKYGPAVSGLSAPG 82

Query: 169 --------REESKAEKTDF-----KFDAAVKIKIIKEVRNFTDLGFEEAKDLVEKVPVVL 309
                    E  +AEKT F     KFDAA KIKIIKEVR FTDLG +EAKDLVEKVPVVL
Sbjct: 83  SAAAGSAAAETKEAEKTVFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKVPVVL 142

Query: 310 KKGVTKEDGNPVIEKLKELGATAVLE 387
           KKGVTK+ GNP+IEKLKELGATAVLE
Sbjct: 143 KKGVTKDQGNPIIEKLKELGATAVLE 168


>ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
           vinifera]
          Length = 165

 Score =  169 bits (427), Expect = 8e-40
 Identities = 95/146 (65%), Positives = 107/146 (73%), Gaps = 20/146 (13%)
 Frame = +1

Query: 10  RSLCTATSTETQTQKLERIADEILHLNKLERHDYQILFGHKLGLNHYGPAISG------- 168
           R+LC+A++T   TQKLERIADE+L L KLER+DY ILF  KLGLN YGPA+SG       
Sbjct: 23  RNLCSASAT---TQKLERIADELLDLTKLERYDYSILFRLKLGLNKYGPAVSGLASADSA 79

Query: 169 --------REESKAEKTDF-----KFDAAVKIKIIKEVRNFTDLGFEEAKDLVEKVPVVL 309
                    +   AEKT F     KFDAA KIKIIKEVR FTDLG +EAKDLVEK PVVL
Sbjct: 80  SAGSGSAPADAKAAEKTAFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKAPVVL 139

Query: 310 KKGVTKEDGNPVIEKLKELGATAVLE 387
           KKGVTKE+GNP++EKLKELGAT VLE
Sbjct: 140 KKGVTKEEGNPIVEKLKELGATVVLE 165


>emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]
          Length = 615

 Score =  169 bits (427), Expect = 8e-40
 Identities = 95/146 (65%), Positives = 107/146 (73%), Gaps = 20/146 (13%)
 Frame = +1

Query: 10  RSLCTATSTETQTQKLERIADEILHLNKLERHDYQILFGHKLGLNHYGPAISG------- 168
           R+LC+A++T   TQKLERIADE+L L KLER+DY ILF  KLGLN YGPA+SG       
Sbjct: 473 RNLCSASAT---TQKLERIADELLDLTKLERYDYSILFRLKLGLNKYGPAVSGLASADSA 529

Query: 169 --------REESKAEKTDF-----KFDAAVKIKIIKEVRNFTDLGFEEAKDLVEKVPVVL 309
                    +   AEKT F     KFDAA KIKIIKEVR FTDLG +EAKDLVEK PVVL
Sbjct: 530 SAGSGSAPADAKAAEKTAFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKAPVVL 589

Query: 310 KKGVTKEDGNPVIEKLKELGATAVLE 387
           KKGVTKE+GNP++EKLKELGAT VLE
Sbjct: 590 KKGVTKEEGNPIVEKLKELGATVVLE 615


>ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|222839078|gb|EEE77429.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  164 bits (416), Expect = 1e-38
 Identities = 89/143 (62%), Positives = 104/143 (72%), Gaps = 21/143 (14%)
 Frame = +1

Query: 22  TATSTETQTQKLERIADEILHLNKLERHDYQILFGHKLGLNHYGPAISG----------- 168
           +++S+ETQTQKLERIAD +L L K+ERHDY ILF HK+GL  YGPA+SG           
Sbjct: 31  SSSSSETQTQKLERIADVLLDLTKIERHDYAILFRHKMGLGRYGPAVSGAILSGPAAPGS 90

Query: 169 -----REESKAEKTDF-----KFDAAVKIKIIKEVRNFTDLGFEEAKDLVEKVPVVLKKG 318
                +  + AEKT F     KFDAA KIK+IKEVR FTDLG +EAKDLVEKVPVVLKKG
Sbjct: 91  ASGDVKTAAAAEKTAFDIKLEKFDAAAKIKVIKEVRTFTDLGLKEAKDLVEKVPVVLKKG 150

Query: 319 VTKEDGNPVIEKLKELGATAVLE 387
           +TKE+  P+IEKLK LGAT VLE
Sbjct: 151 LTKEEAGPIIEKLKALGATVVLE 173


>ref|XP_002868977.1| ribosomal protein L12 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297314813|gb|EFH45236.1| ribosomal protein
           L12 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 167

 Score =  147 bits (372), Expect = 2e-33
 Identities = 79/144 (54%), Positives = 101/144 (70%), Gaps = 15/144 (10%)
 Frame = +1

Query: 1   TLQRSLCTATSTETQTQKLERIADEILHLNKLERHDYQILFGHKLGLNHYGPAI------ 162
           T  R LC   S E +T+KLERIAD++L+LN++E +DY ILF HKLGLN YG A+      
Sbjct: 24  TATRHLCAVASPEARTKKLERIADDLLNLNRIELYDYSILFSHKLGLNRYGSAVAVAGSD 83

Query: 163 ---SGREESK-AEKTDF-----KFDAAVKIKIIKEVRNFTDLGFEEAKDLVEKVPVVLKK 315
              SG  E+K AEKT F     KF+ A KIK+IKE+R FTDLG +EAK+LVEK PV++KK
Sbjct: 84  GEASGSTETKTAEKTAFDVKLEKFETASKIKVIKEIRAFTDLGLKEAKELVEKAPVIVKK 143

Query: 316 GVTKEDGNPVIEKLKELGATAVLE 387
           G+TKE+   ++EKLK +GA   LE
Sbjct: 144 GLTKEEAEKIMEKLKAVGAIVALE 167