BLASTX nr result

ID: Coptis21_contig00000595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000595
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268800.2| PREDICTED: COBW domain-containing protein 2-...   361   7e-98
ref|XP_004152183.1| PREDICTED: COBW domain-containing protein 2-...   360   2e-97
ref|XP_002327406.1| predicted protein [Populus trichocarpa] gi|2...   360   2e-97
ref|XP_003632769.1| PREDICTED: COBW domain-containing protein 2-...   355   5e-96
ref|NP_178163.1| plastid transcriptionally active 17 protein [Ar...   353   2e-95

>ref|XP_002268800.2| PREDICTED: COBW domain-containing protein 2-like isoform 1 [Vitis
           vinifera] gi|297743555|emb|CBI36422.3| unnamed protein
           product [Vitis vinifera]
          Length = 455

 Score =  361 bits (927), Expect = 7e-98
 Identities = 179/204 (87%), Positives = 191/204 (93%)
 Frame = -1

Query: 707 LNHILTADHGKRIAVIENEFGEVDIDGSLVASKTTGAEDIVMLNNGCLCCTVRGDLVRMI 528
           LNHILTADHGKRIAVIENE+GEVDIDGSLVA+KTTGAEDI+MLNNGCLCCTVRGDLVRMI
Sbjct: 111 LNHILTADHGKRIAVIENEYGEVDIDGSLVAAKTTGAEDIIMLNNGCLCCTVRGDLVRMI 170

Query: 527 AELVNKKKGKFDHIVIETTGLANPAPIIQTFYAEDQVFNDVKLDGVITLVDAKHATLHLD 348
           +ELVNKKKGKFDHIVIETTGLANPAPIIQTFYAEDQ+FNDVKLDGV+TLVDAKHA  HLD
Sbjct: 171 SELVNKKKGKFDHIVIETTGLANPAPIIQTFYAEDQIFNDVKLDGVVTLVDAKHADFHLD 230

Query: 347 EVKPKGIVNEAVEQIAYADRIIVNKTDLVGEREIDSLVQRIKSINQMASLKRAKFGNVDL 168
           EVKPKG+VNEAVEQIAYADRIIVNK DLVGE EI SLVQRIK+IN++A LKR +FG VDL
Sbjct: 231 EVKPKGVVNEAVEQIAYADRIIVNKIDLVGEPEIASLVQRIKNINRLAHLKRTEFGKVDL 290

Query: 167 DYVLGIGGFDLERIESVVTDESSK 96
           DYVLG+GGFDLERIES V  E  K
Sbjct: 291 DYVLGVGGFDLERIESAVNSEGVK 314


>ref|XP_004152183.1| PREDICTED: COBW domain-containing protein 2-like [Cucumis sativus]
           gi|449513465|ref|XP_004164332.1| PREDICTED: COBW
           domain-containing protein 2-like [Cucumis sativus]
          Length = 451

 Score =  360 bits (924), Expect = 2e-97
 Identities = 180/202 (89%), Positives = 190/202 (94%)
 Frame = -1

Query: 707 LNHILTADHGKRIAVIENEFGEVDIDGSLVASKTTGAEDIVMLNNGCLCCTVRGDLVRMI 528
           LNHILTADHGKRIAVIENEFGEVDIDGSLVA+KTTGAEDIVMLNNGCLCCTVRGDLVRMI
Sbjct: 106 LNHILTADHGKRIAVIENEFGEVDIDGSLVAAKTTGAEDIVMLNNGCLCCTVRGDLVRMI 165

Query: 527 AELVNKKKGKFDHIVIETTGLANPAPIIQTFYAEDQVFNDVKLDGVITLVDAKHATLHLD 348
           +ELVNKKKGKFDHIVIETTGLANP+PIIQTFYAED VFNDVKLDGV+TLVDAKHAT HLD
Sbjct: 166 SELVNKKKGKFDHIVIETTGLANPSPIIQTFYAEDSVFNDVKLDGVVTLVDAKHATFHLD 225

Query: 347 EVKPKGIVNEAVEQIAYADRIIVNKTDLVGEREIDSLVQRIKSINQMASLKRAKFGNVDL 168
           EVKP+G+VNEAVEQIAYADRIIVNKTDLVGE +I  LVQRIK IN+MA LKR K+G VDL
Sbjct: 226 EVKPEGVVNEAVEQIAYADRIIVNKTDLVGEPQIADLVQRIKKINRMAELKRTKYGKVDL 285

Query: 167 DYVLGIGGFDLERIESVVTDES 102
           DYVLGIGGFDLERI+S V  ES
Sbjct: 286 DYVLGIGGFDLERIDSSVDTES 307


>ref|XP_002327406.1| predicted protein [Populus trichocarpa] gi|222835960|gb|EEE74381.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  360 bits (924), Expect = 2e-97
 Identities = 177/204 (86%), Positives = 194/204 (95%)
 Frame = -1

Query: 707 LNHILTADHGKRIAVIENEFGEVDIDGSLVASKTTGAEDIVMLNNGCLCCTVRGDLVRMI 528
           LNHILTADHGKRIAVIENE+GEVDIDGSLVA+KT GAEDI+MLNNGCLCCTVRGDLVRMI
Sbjct: 49  LNHILTADHGKRIAVIENEYGEVDIDGSLVAAKTAGAEDIIMLNNGCLCCTVRGDLVRMI 108

Query: 527 AELVNKKKGKFDHIVIETTGLANPAPIIQTFYAEDQVFNDVKLDGVITLVDAKHATLHLD 348
           A+LV +KK KFDHIVIETTGLANPAPIIQTFYAEDQVFNDVKLDGV+TLVDAKHA LHLD
Sbjct: 109 ADLVKRKKDKFDHIVIETTGLANPAPIIQTFYAEDQVFNDVKLDGVVTLVDAKHAPLHLD 168

Query: 347 EVKPKGIVNEAVEQIAYADRIIVNKTDLVGEREIDSLVQRIKSINQMASLKRAKFGNVDL 168
           EVKPKG+VNEAVEQIAYADR+I+NKTDLVGE+EI SLVQRI++IN+MA+LKR ++G VDL
Sbjct: 169 EVKPKGVVNEAVEQIAYADRVILNKTDLVGEQEIASLVQRIRNINRMANLKRTQYGKVDL 228

Query: 167 DYVLGIGGFDLERIESVVTDESSK 96
           DYVLGIGGFDLERIES V+DE  K
Sbjct: 229 DYVLGIGGFDLERIESAVSDEDRK 252


>ref|XP_003632769.1| PREDICTED: COBW domain-containing protein 2-like isoform 2 [Vitis
           vinifera]
          Length = 437

 Score =  355 bits (911), Expect = 5e-96
 Identities = 175/196 (89%), Positives = 188/196 (95%)
 Frame = -1

Query: 707 LNHILTADHGKRIAVIENEFGEVDIDGSLVASKTTGAEDIVMLNNGCLCCTVRGDLVRMI 528
           LNHILTADHGKRIAVIENE+GEVDIDGSLVA+KTTGAEDI+MLNNGCLCCTVRGDLVRMI
Sbjct: 111 LNHILTADHGKRIAVIENEYGEVDIDGSLVAAKTTGAEDIIMLNNGCLCCTVRGDLVRMI 170

Query: 527 AELVNKKKGKFDHIVIETTGLANPAPIIQTFYAEDQVFNDVKLDGVITLVDAKHATLHLD 348
           +ELVNKKKGKFDHIVIETTGLANPAPIIQTFYAEDQ+FNDVKLDGV+TLVDAKHA  HLD
Sbjct: 171 SELVNKKKGKFDHIVIETTGLANPAPIIQTFYAEDQIFNDVKLDGVVTLVDAKHADFHLD 230

Query: 347 EVKPKGIVNEAVEQIAYADRIIVNKTDLVGEREIDSLVQRIKSINQMASLKRAKFGNVDL 168
           EVKPKG+VNEAVEQIAYADRIIVNK DLVGE EI SLVQRIK+IN++A LKR +FG VDL
Sbjct: 231 EVKPKGVVNEAVEQIAYADRIIVNKIDLVGEPEIASLVQRIKNINRLAHLKRTEFGKVDL 290

Query: 167 DYVLGIGGFDLERIES 120
           DYVLG+GGFDLERI+S
Sbjct: 291 DYVLGVGGFDLERIKS 306


>ref|NP_178163.1| plastid transcriptionally active 17 protein [Arabidopsis thaliana]
           gi|6730739|gb|AAF27129.1|AC018849_17 hypothetical
           protein; 58060-60358 [Arabidopsis thaliana]
           gi|48958493|gb|AAT47799.1| At1g80480 [Arabidopsis
           thaliana] gi|51536562|gb|AAU05519.1| At1g80480
           [Arabidopsis thaliana] gi|332198289|gb|AEE36410.1|
           plastid transcriptionally active 17 protein [Arabidopsis
           thaliana]
          Length = 444

 Score =  353 bits (905), Expect = 2e-95
 Identities = 174/201 (86%), Positives = 188/201 (93%)
 Frame = -1

Query: 707 LNHILTADHGKRIAVIENEFGEVDIDGSLVASKTTGAEDIVMLNNGCLCCTVRGDLVRMI 528
           LNHILT DHGKRIAVIENEFGEVDIDGSLVASK+ GAEDIVMLNNGCLCCTVRGDLVRMI
Sbjct: 106 LNHILTRDHGKRIAVIENEFGEVDIDGSLVASKSIGAEDIVMLNNGCLCCTVRGDLVRMI 165

Query: 527 AELVNKKKGKFDHIVIETTGLANPAPIIQTFYAEDQVFNDVKLDGVITLVDAKHATLHLD 348
            ELVN KKGKFDHIVIETTGLANPAPIIQTFYAE+++FNDVKLDGV+TLVDAKHA LHLD
Sbjct: 166 GELVNTKKGKFDHIVIETTGLANPAPIIQTFYAEEEIFNDVKLDGVVTLVDAKHARLHLD 225

Query: 347 EVKPKGIVNEAVEQIAYADRIIVNKTDLVGEREIDSLVQRIKSINQMASLKRAKFGNVDL 168
           EVKP+G+VNEAVEQIAYADRIIVNKTDLVGE E+ S+VQRIK+IN MA + R K+GNVDL
Sbjct: 226 EVKPEGVVNEAVEQIAYADRIIVNKTDLVGEAELGSVVQRIKTINSMAQMTRTKYGNVDL 285

Query: 167 DYVLGIGGFDLERIESVVTDE 105
           DYVLGIGGFDLERIES V ++
Sbjct: 286 DYVLGIGGFDLERIESSVNED 306


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