BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000577
         (1567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAM58984.1| beta tubulin 6 [Hordeum vulgare subsp. vulgare]       680   0.0  
ref|XP_003568451.1| PREDICTED: tubulin beta-1 chain-like [Brachy...   679   0.0  
sp|Q9ZRB2.1|TBB1_WHEAT RecName: Full=Tubulin beta-1 chain; AltNa...   678   0.0  
sp|Q9ZRA8.1|TBB5_WHEAT RecName: Full=Tubulin beta-5 chain; AltNa...   677   0.0  
ref|XP_003567397.1| PREDICTED: tubulin beta-4 chain-like [Brachy...   677   0.0  

>emb|CAM58984.1| beta tubulin 6 [Hordeum vulgare subsp. vulgare]
          Length = 445

 Score =  680 bits (1755), Expect = 0.0
 Identities = 341/385 (88%), Positives = 343/385 (89%)
 Frame = -1

Query: 1567 DPTGKYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMXXXXXXXXXXXXXXXXX 1388
            DPTG+YVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTM                 
Sbjct: 31   DPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI------ 84

Query: 1387 XXXXXXXXXXXXFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 1208
                        FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG
Sbjct: 85   ------------FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132

Query: 1207 FQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 1028
            FQVCH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL
Sbjct: 133  FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192

Query: 1027 VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 848
            VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK
Sbjct: 193  VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252

Query: 847  LAVNLIPFPRLHFFMVGFAPLTSRGSQLYRSLTVPELTQQMWDSKNMMCAADPRHGRYLT 668
            LAVNLIPFPRLHFFMVGFAPLTSRGSQ+YRSLTVPELTQQMWDSKNMMCAADPRHGRYLT
Sbjct: 253  LAVNLIPFPRLHFFMVGFAPLTSRGSQMYRSLTVPELTQQMWDSKNMMCAADPRHGRYLT 312

Query: 667  ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNST 488
            ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNST
Sbjct: 313  ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNST 372

Query: 487  SIQEMFRRVSEQFTAMFRRKAFLHW 413
            SIQEMFRRVSEQFTAMFRRKAFLHW
Sbjct: 373  SIQEMFRRVSEQFTAMFRRKAFLHW 397


>ref|XP_003568451.1| PREDICTED: tubulin beta-1 chain-like [Brachypodium distachyon]
          Length = 444

 Score =  679 bits (1751), Expect = 0.0
 Identities = 340/385 (88%), Positives = 342/385 (88%)
 Frame = -1

Query: 1567 DPTGKYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMXXXXXXXXXXXXXXXXX 1388
            DPTG+YVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTM                 
Sbjct: 31   DPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI------ 84

Query: 1387 XXXXXXXXXXXXFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 1208
                        FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG
Sbjct: 85   ------------FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132

Query: 1207 FQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 1028
            FQVCH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL
Sbjct: 133  FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192

Query: 1027 VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 848
            VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK
Sbjct: 193  VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252

Query: 847  LAVNLIPFPRLHFFMVGFAPLTSRGSQLYRSLTVPELTQQMWDSKNMMCAADPRHGRYLT 668
            LAVNLIPFPRLHFFMVGFAPLTSRGSQ+YRSLTVPELTQQMWDSKNMMCAADPRHGRYLT
Sbjct: 253  LAVNLIPFPRLHFFMVGFAPLTSRGSQMYRSLTVPELTQQMWDSKNMMCAADPRHGRYLT 312

Query: 667  ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNST 488
            ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSM STFIGNST
Sbjct: 313  ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMGSTFIGNST 372

Query: 487  SIQEMFRRVSEQFTAMFRRKAFLHW 413
            SIQEMFRRVSEQFTAMFRRKAFLHW
Sbjct: 373  SIQEMFRRVSEQFTAMFRRKAFLHW 397


>sp|Q9ZRB2.1|TBB1_WHEAT RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin
            gi|4098319|gb|AAD10487.1| beta-tubulin 1 [Triticum
            aestivum]
          Length = 445

 Score =  678 bits (1750), Expect = 0.0
 Identities = 340/385 (88%), Positives = 342/385 (88%)
 Frame = -1

Query: 1567 DPTGKYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMXXXXXXXXXXXXXXXXX 1388
            DPTG+YVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTM                 
Sbjct: 31   DPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI------ 84

Query: 1387 XXXXXXXXXXXXFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 1208
                        FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG
Sbjct: 85   ------------FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132

Query: 1207 FQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 1028
            FQVCH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL
Sbjct: 133  FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192

Query: 1027 VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 848
            VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK
Sbjct: 193  VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252

Query: 847  LAVNLIPFPRLHFFMVGFAPLTSRGSQLYRSLTVPELTQQMWDSKNMMCAADPRHGRYLT 668
            LAVNLIPFPRLHFFMVGFAPLTSRGSQ+YR LTVPELTQQMWDSKNMMCAADPRHGRYLT
Sbjct: 253  LAVNLIPFPRLHFFMVGFAPLTSRGSQMYRPLTVPELTQQMWDSKNMMCAADPRHGRYLT 312

Query: 667  ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNST 488
            ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNST
Sbjct: 313  ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNST 372

Query: 487  SIQEMFRRVSEQFTAMFRRKAFLHW 413
            SIQEMFRRVSEQFTAMFRRKAFLHW
Sbjct: 373  SIQEMFRRVSEQFTAMFRRKAFLHW 397


>sp|Q9ZRA8.1|TBB5_WHEAT RecName: Full=Tubulin beta-5 chain; AltName: Full=Beta-5-tubulin
            gi|4098331|gb|AAD10492.1| beta-tubulin 5 [Triticum
            aestivum] gi|146760213|emb|CAM58982.1| beta tubulin 4
            [Hordeum vulgare subsp. vulgare]
          Length = 447

 Score =  677 bits (1747), Expect = 0.0
 Identities = 340/385 (88%), Positives = 342/385 (88%)
 Frame = -1

Query: 1567 DPTGKYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMXXXXXXXXXXXXXXXXX 1388
            DPTG+YVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTM                 
Sbjct: 31   DPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI------ 84

Query: 1387 XXXXXXXXXXXXFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 1208
                        FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG
Sbjct: 85   ------------FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132

Query: 1207 FQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 1028
            FQVCH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL
Sbjct: 133  FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192

Query: 1027 VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 848
            VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK
Sbjct: 193  VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252

Query: 847  LAVNLIPFPRLHFFMVGFAPLTSRGSQLYRSLTVPELTQQMWDSKNMMCAADPRHGRYLT 668
            LAVNLIPFPRLHFFMVGFAPLTSRGSQ+YRSLTVPELTQQMWDSKNMMCAADPRHGRYLT
Sbjct: 253  LAVNLIPFPRLHFFMVGFAPLTSRGSQMYRSLTVPELTQQMWDSKNMMCAADPRHGRYLT 312

Query: 667  ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNST 488
            ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI PRGLSMASTFIGNST
Sbjct: 313  ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRGLSMASTFIGNST 372

Query: 487  SIQEMFRRVSEQFTAMFRRKAFLHW 413
            SIQEMFRRVSEQFTAMFRRKAFLHW
Sbjct: 373  SIQEMFRRVSEQFTAMFRRKAFLHW 397


>ref|XP_003567397.1| PREDICTED: tubulin beta-4 chain-like [Brachypodium distachyon]
          Length = 446

 Score =  677 bits (1746), Expect = 0.0
 Identities = 338/385 (87%), Positives = 343/385 (89%)
 Frame = -1

Query: 1567 DPTGKYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMXXXXXXXXXXXXXXXXX 1388
            DPTG+YVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTM                 
Sbjct: 31   DPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQI------ 84

Query: 1387 XXXXXXXXXXXXFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 1208
                        FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG
Sbjct: 85   ------------FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132

Query: 1207 FQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 1028
            FQVCH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL
Sbjct: 133  FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192

Query: 1027 VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 848
            VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK
Sbjct: 193  VENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRK 252

Query: 847  LAVNLIPFPRLHFFMVGFAPLTSRGSQLYRSLTVPELTQQMWDSKNMMCAADPRHGRYLT 668
            LAVNLIPFPRLHFFMVGFAPLTSRGSQ+YR+LTVPELTQQMWDSKNMMCAADPRHGRYLT
Sbjct: 253  LAVNLIPFPRLHFFMVGFAPLTSRGSQMYRALTVPELTQQMWDSKNMMCAADPRHGRYLT 312

Query: 667  ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNST 488
            ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIP+NVKSSVCDIPPRGLSMASTF+GNST
Sbjct: 313  ASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSSVCDIPPRGLSMASTFVGNST 372

Query: 487  SIQEMFRRVSEQFTAMFRRKAFLHW 413
            SIQEMFRRVSEQFTAMFRRKAFLHW
Sbjct: 373  SIQEMFRRVSEQFTAMFRRKAFLHW 397