BLASTX nr result

ID: Coptis21_contig00000573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000573
         (1074 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526147.1| PREDICTED: uncharacterized protein LOC100795...   216   8e-54
gb|ACU19282.1| unknown [Glycine max]                                  212   1e-52
ref|XP_004145496.1| PREDICTED: nuclear nucleic acid-binding prot...   209   7e-52
ref|XP_002324916.1| predicted protein [Populus trichocarpa] gi|2...   207   4e-51
ref|XP_002309677.1| predicted protein [Populus trichocarpa] gi|2...   204   2e-50

>ref|XP_003526147.1| PREDICTED: uncharacterized protein LOC100795174 [Glycine max]
          Length = 211

 Score =  216 bits (550), Expect = 8e-54
 Identities = 113/208 (54%), Positives = 149/208 (71%)
 Frame = +1

Query: 28  GEESGALIIPESVIEAANKSLSNTEDLKLHLQAFLSSISEPDVXXXXXXXXXXXXXXXFA 207
           G ESGA  +PE V+++ N +LSN + L+ H   FLS +S+P                  A
Sbjct: 4   GSESGA--VPEPVMDSVNTTLSNLQQLRTHFNEFLS-LSDPQTLSQMPPLQRAHSLFILA 60

Query: 208 KATSTLVALRLRCNGVHPNDHPVKTELERLNLYEDKLERFMAISKAPLRRSTTLNYQAAT 387
           K TSTL+AL LRC GVHP+DHP+K+EL+R++LYEDKLER + +SKAPLR STTLNYQAAT
Sbjct: 61  KVTSTLLALNLRCTGVHPDDHPIKSELDRVSLYEDKLERLLDLSKAPLRPSTTLNYQAAT 120

Query: 388 RFIEHSLPDLTSVQRQSMRDISRGETVRSRAHLNAKKKRKVQLSEKKSVRTAAQEFLEKA 567
           RFIEHSLPDLT+ QR++MR+ISRGE  ++     A +KRK Q SEK SV+ AA+EFL+KA
Sbjct: 121 RFIEHSLPDLTTEQRENMRNISRGERPKTNRLGQAGQKRKYQSSEKPSVQAAAKEFLQKA 180

Query: 568 RQEILGANNGDNKGPLRHETSDGEDEPM 651
            +E+LG N+G  KGPL+ +  D +D+ +
Sbjct: 181 ARELLGDNSGGIKGPLQVDILDNDDDEL 208


>gb|ACU19282.1| unknown [Glycine max]
          Length = 211

 Score =  212 bits (539), Expect = 1e-52
 Identities = 111/208 (53%), Positives = 146/208 (70%)
 Frame = +1

Query: 28  GEESGALIIPESVIEAANKSLSNTEDLKLHLQAFLSSISEPDVXXXXXXXXXXXXXXXFA 207
           G ESGA  +PE V+++ N +LSN + L+ H   FLS +S+P                  A
Sbjct: 4   GSESGA--VPEPVMDSVNTTLSNLQQLRTHFNEFLS-LSDPQTLSQMPPLHRAHSLFILA 60

Query: 208 KATSTLVALRLRCNGVHPNDHPVKTELERLNLYEDKLERFMAISKAPLRRSTTLNYQAAT 387
           K TSTL+AL LRC GVHP+DHP+K+EL+R++LYEDKLER + +SKAPLR STTLNYQAAT
Sbjct: 61  KVTSTLLALNLRCTGVHPDDHPIKSELDRVSLYEDKLERLLDLSKAPLRPSTTLNYQAAT 120

Query: 388 RFIEHSLPDLTSVQRQSMRDISRGETVRSRAHLNAKKKRKVQLSEKKSVRTAAQEFLEKA 567
           RFIEH LPDLT+ QR++MR+ISRGE  ++     A +KRK Q SEK SV+ AA EF +KA
Sbjct: 121 RFIEHFLPDLTTEQRENMRNISRGERPKTNRLGQAGQKRKYQSSEKPSVQAAAMEFFQKA 180

Query: 568 RQEILGANNGDNKGPLRHETSDGEDEPM 651
            +E+LG N+G  KGPL+ +  D +D+ +
Sbjct: 181 ARELLGDNSGGIKGPLQVDILDNDDDEL 208


>ref|XP_004145496.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Cucumis
           sativus] gi|449485203|ref|XP_004157098.1| PREDICTED:
           nuclear nucleic acid-binding protein C1D-like [Cucumis
           sativus]
          Length = 211

 Score =  209 bits (533), Expect = 7e-52
 Identities = 110/198 (55%), Positives = 145/198 (73%), Gaps = 1/198 (0%)
 Frame = +1

Query: 49  IIPESVIEAANKSLSNTEDLKLHLQAFLSSISEPDVXXXXXXXXXXXXXXXFAKATSTLV 228
           ++PE V+++   +L N E ++ HL +FLS I+EPDV                A+ T+TL 
Sbjct: 10  VVPEKVMDSVKTTLDNVEQVQTHLISFLS-IAEPDVLAQMQPLQRAQSMLLLARVTTTLF 68

Query: 229 ALRLRCNGVHPNDHPVKTELERLNLYEDKLERFMAISKAPLRRSTTLNYQAATRFIEHSL 408
           AL+LRC+GVH +DHP+K+ELERL+LY+DKLERF+ +SKAPL+RSTTLNYQAATRFIEHSL
Sbjct: 69  ALKLRCSGVHLDDHPIKSELERLSLYQDKLERFIGLSKAPLKRSTTLNYQAATRFIEHSL 128

Query: 409 PDLTSVQRQSMRDISRGETVR-SRAHLNAKKKRKVQLSEKKSVRTAAQEFLEKARQEILG 585
           PDLT  Q+ SMRDISRG+  +  +   N +KKRK Q SEK+SV+TAA+EFLEKA +E+LG
Sbjct: 129 PDLTQEQKLSMRDISRGKGQKMKQLERNVQKKRKYQSSEKQSVQTAAKEFLEKAARELLG 188

Query: 586 ANNGDNKGPLRHETSDGE 639
             NG  +GPL  +  D +
Sbjct: 189 DCNGGLQGPLCGDALDDD 206


>ref|XP_002324916.1| predicted protein [Populus trichocarpa] gi|222866350|gb|EEF03481.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  207 bits (527), Expect = 4e-51
 Identities = 111/202 (54%), Positives = 141/202 (69%), Gaps = 1/202 (0%)
 Frame = +1

Query: 52  IPESVIEAANKSLSNTEDLKLHLQAFLSSISEPDVXXXXXXXXXXXXXXXFAKATSTLVA 231
           +PES IEA  ++++N + ++ HL  FLS ++ PDV                AKATST+ A
Sbjct: 11  VPESTIEAVERTVANLKLVETHLLEFLS-LANPDVLDEMPPLQRAQSLFMLAKATSTIFA 69

Query: 232 LRLRCNGVHPNDHPVKTELERLNLYEDKLERFMAISKAPLRRSTTLNYQAATRFIEHSLP 411
           LRLR  G+HP++HP+KTELERL+LY+DKLE+F+ ISK P +RSTTLNYQAATRFIEHSLP
Sbjct: 70  LRLRTTGIHPDEHPIKTELERLSLYQDKLEQFINISKEPSQRSTTLNYQAATRFIEHSLP 129

Query: 412 DLTSVQRQSMRDISRGETVRSR-AHLNAKKKRKVQLSEKKSVRTAAQEFLEKARQEILGA 588
           DLT  QR+SMRDISRGE  + +    +  KKRK   SEK+SV+ AAQEFLEKA +E+ G 
Sbjct: 130 DLTPEQRKSMRDISRGEGSKIKYVERSTHKKRKYDTSEKQSVKAAAQEFLEKAARELFGG 189

Query: 589 NNGDNKGPLRHETSDGEDEPMD 654
           N    KGPL    S  +D P+D
Sbjct: 190 NTDGFKGPLVKVDSASDDNPVD 211


>ref|XP_002309677.1| predicted protein [Populus trichocarpa] gi|222855653|gb|EEE93200.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  204 bits (520), Expect = 2e-50
 Identities = 111/208 (53%), Positives = 144/208 (69%), Gaps = 2/208 (0%)
 Frame = +1

Query: 37  SGALIIPESVIEAANKSLSNTEDLKLHLQAFLSSISEPDVXXXXXXXXXXXXXXXFAKAT 216
           S + ++PES +EA  ++L+N + ++ HL  FLS ++ PDV                AKAT
Sbjct: 6   SNSDVVPESAMEAVERTLANVKQVETHLLEFLS-LANPDVLDEMPPLQRAQSLFMLAKAT 64

Query: 217 STLVALRLRCNGVHPNDHPVKTELERLNLYEDKLERFMAISKAPLRRSTTLNYQAATRFI 396
           STL ALRLR  G+HP++HP+KTELERL+LY+DKLE+F+ ISK PL RSTTLNYQAATRFI
Sbjct: 65  STLFALRLRTTGIHPDEHPIKTELERLSLYQDKLEQFVDISKEPLHRSTTLNYQAATRFI 124

Query: 397 EHSLPDLTSVQRQSMRDISRGETVRSR-AHLNAKKKRKVQLSEKKSVRTAAQEFLEKARQ 573
           EHSLPDLT  QR+SMR+IS+GE  + +    + +KKRK   SE +SV+ AAQEFLEKA +
Sbjct: 125 EHSLPDLTPEQRKSMRNISKGEGPKIKYTERSTRKKRKCDTSETQSVQAAAQEFLEKAAR 184

Query: 574 EILGANNGDNKGPLRHETSDGEDE-PMD 654
           E+ G +    KGPL    S  ED  P+D
Sbjct: 185 ELFGGSTDGFKGPLIKTDSSSEDNLPVD 212


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