BLASTX nr result

ID: Coptis21_contig00000566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000566
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263263.1| PREDICTED: glyceraldehyde-3-phosphate dehydr...   247   2e-63
emb|CAN71286.1| hypothetical protein VITISV_007003 [Vitis vinifera]   247   2e-63
ref|XP_003570206.1| PREDICTED: glyceraldehyde-3-phosphate dehydr...   246   7e-63
ref|XP_004154566.1| PREDICTED: glyceraldehyde-3-phosphate dehydr...   244   3e-62
ref|XP_004140018.1| PREDICTED: glyceraldehyde-3-phosphate dehydr...   244   3e-62

>ref|XP_002263263.1| PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, cytosolic
           [Vitis vinifera] gi|297736130|emb|CBI24168.3| unnamed
           protein product [Vitis vinifera]
          Length = 429

 Score =  247 bits (631), Expect = 2e-63
 Identities = 118/140 (84%), Positives = 130/140 (92%)
 Frame = +3

Query: 507 VIDASTLEINGKKVVVTSKRDPAEIPWGEYGADYVVESSGVFTTLEKGSLHIKGGAKKVI 686
           V+D STLEINGK++ VTSKRDP+EIPWG+YG DYVVESSGVFTT EK S HIKGGAKKV+
Sbjct: 152 VLDESTLEINGKQIKVTSKRDPSEIPWGDYGIDYVVESSGVFTTTEKASAHIKGGAKKVV 211

Query: 687 ISAPSADAPMFVVGVNERTYKPSINIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS 866
           ISAPSADAPMFVVGVNE +YKPS+NIVSNASCTTNCLAPLAKV+++ FGIVEGLMTTVH+
Sbjct: 212 ISAPSADAPMFVVGVNETSYKPSMNIVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHA 271

Query: 867 LTATQKTVDGPSSKDWRGGR 926
            TATQKTVDGPS KDWRGGR
Sbjct: 272 TTATQKTVDGPSMKDWRGGR 291



 Score =  129 bits (323), Expect = 1e-27
 Identities = 71/123 (57%), Positives = 87/123 (70%), Gaps = 10/123 (8%)
 Frame = +1

Query: 34  MAFSTMIRST---VAASPPSFIESPKQS-------FSGNHSLKSAKVQTSVFGNSIQVDS 183
           MA  ++ RS     AA+  + ++S + S          N +  S KVQT++FG     +S
Sbjct: 1   MALYSLFRSAPSAAAAAAATVVDSSRPSDRCKVSCIGFNSNADSLKVQTTIFGTPCIGNS 60

Query: 184 LSLQRCSGRSIQPIKATATETPPTIPKSWSSGKTKIGINGFGRIGRLVLRIATSRDDIDV 363
            SLQ+CS RS+QPIKATATE PPT+ KSWSSG+TKIGINGFGRIGRLVLR+ATSRDDIDV
Sbjct: 61  SSLQKCSARSLQPIKATATELPPTVQKSWSSGQTKIGINGFGRIGRLVLRVATSRDDIDV 120

Query: 364 VAV 372
           VAV
Sbjct: 121 VAV 123


>emb|CAN71286.1| hypothetical protein VITISV_007003 [Vitis vinifera]
          Length = 367

 Score =  247 bits (631), Expect = 2e-63
 Identities = 118/140 (84%), Positives = 130/140 (92%)
 Frame = +3

Query: 507 VIDASTLEINGKKVVVTSKRDPAEIPWGEYGADYVVESSGVFTTLEKGSLHIKGGAKKVI 686
           V+D STLEINGK++ VTSKRDP+EIPWG+YG DYVVESSGVFTT EK S HIKGGAKKV+
Sbjct: 90  VLDESTLEINGKQIKVTSKRDPSEIPWGDYGIDYVVESSGVFTTTEKASAHIKGGAKKVV 149

Query: 687 ISAPSADAPMFVVGVNERTYKPSINIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS 866
           ISAPSADAPMFVVGVNE +YKPS+NIVSNASCTTNCLAPLAKV+++ FGIVEGLMTTVH+
Sbjct: 150 ISAPSADAPMFVVGVNETSYKPSMNIVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHA 209

Query: 867 LTATQKTVDGPSSKDWRGGR 926
            TATQKTVDGPS KDWRGGR
Sbjct: 210 TTATQKTVDGPSMKDWRGGR 229


>ref|XP_003570206.1| PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like
           [Brachypodium distachyon]
          Length = 417

 Score =  246 bits (627), Expect = 7e-63
 Identities = 113/140 (80%), Positives = 130/140 (92%)
 Frame = +3

Query: 507 VIDASTLEINGKKVVVTSKRDPAEIPWGEYGADYVVESSGVFTTLEKGSLHIKGGAKKVI 686
           V+D STLEINGKK+ +TSKRDPAEIPWG +GADYVVESSG+FTT+EK S+H+KGGAKKV+
Sbjct: 140 VVDDSTLEINGKKITITSKRDPAEIPWGNFGADYVVESSGIFTTIEKASVHLKGGAKKVV 199

Query: 687 ISAPSADAPMFVVGVNERTYKPSINIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS 866
           ISAPSADAPMFVVGVNE +Y P +N+VSNASCTTNCLAPLAKV+++ FGI+EGLMTTVH+
Sbjct: 200 ISAPSADAPMFVVGVNENSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHA 259

Query: 867 LTATQKTVDGPSSKDWRGGR 926
            TATQKTVDGPS KDWRGGR
Sbjct: 260 TTATQKTVDGPSMKDWRGGR 279



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 46/75 (61%), Positives = 57/75 (76%)
 Frame = +1

Query: 148 TSVFGNSIQVDSLSLQRCSGRSIQPIKATATETPPTIPKSWSSGKTKIGINGFGRIGRLV 327
           +S FG S    S++    S R+IQP++A AT+ PP +P+  S  KTK+GINGFGRIGRLV
Sbjct: 39  SSHFGCSFP--SIAASSSSARNIQPLRAIATQAPPVVPQYSSGEKTKVGINGFGRIGRLV 96

Query: 328 LRIATSRDDIDVVAV 372
           LRIATSRDDI+VVAV
Sbjct: 97  LRIATSRDDIEVVAV 111


>ref|XP_004154566.1| PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like
           [Cucumis sativus]
          Length = 425

 Score =  244 bits (622), Expect = 3e-62
 Identities = 115/140 (82%), Positives = 131/140 (93%)
 Frame = +3

Query: 507 VIDASTLEINGKKVVVTSKRDPAEIPWGEYGADYVVESSGVFTTLEKGSLHIKGGAKKVI 686
           V+D STLEINGK++ V SKRDPA+IPWG+YGA+YVVESSGVFTT EK S H+KGGAKKV+
Sbjct: 148 VLDDSTLEINGKQIKVVSKRDPADIPWGDYGAEYVVESSGVFTTKEKASAHLKGGAKKVV 207

Query: 687 ISAPSADAPMFVVGVNERTYKPSINIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS 866
           ISAPSADAPMFVVGVNE+TYKP+++IVSNASCTTNCLAPLAKV+++ FGIVEGLMTTVH+
Sbjct: 208 ISAPSADAPMFVVGVNEKTYKPAMDIVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHA 267

Query: 867 LTATQKTVDGPSSKDWRGGR 926
            TATQKTVDGPS KDWRGGR
Sbjct: 268 TTATQKTVDGPSMKDWRGGR 287



 Score =  112 bits (281), Expect = 9e-23
 Identities = 67/116 (57%), Positives = 80/116 (68%), Gaps = 4/116 (3%)
 Frame = +1

Query: 37  AFSTMIRSTVAASPPSFIESP--KQSFSGNHSLKSAKVQTSVFGNSIQ--VDSLSLQRCS 204
           A ST+  S + AS   F  S   K SF GN    S K+Q+ +FG ++     SL L+  +
Sbjct: 8   ARSTVSSSLIEASRSDFSPSDFRKASFIGN----SLKLQSGLFGTTVSSGASSLQLRSSN 63

Query: 205 GRSIQPIKATATETPPTIPKSWSSGKTKIGINGFGRIGRLVLRIATSRDDIDVVAV 372
            R++QPIKATATE PP I K+  SGKTKIGINGFGRIGRLVLR+ATSRDDIDVVAV
Sbjct: 64  NRTVQPIKATATEAPPAIQKTPRSGKTKIGINGFGRIGRLVLRVATSRDDIDVVAV 119


>ref|XP_004140018.1| PREDICTED: glyceraldehyde-3-phosphate dehydrogenase-like [Cucumis
           sativus]
          Length = 415

 Score =  244 bits (622), Expect = 3e-62
 Identities = 115/140 (82%), Positives = 131/140 (93%)
 Frame = +3

Query: 507 VIDASTLEINGKKVVVTSKRDPAEIPWGEYGADYVVESSGVFTTLEKGSLHIKGGAKKVI 686
           V+D STLEINGK++ V SKRDPA+IPWG+YGA+YVVESSGVFTT EK S H+KGGAKKV+
Sbjct: 148 VLDDSTLEINGKQIKVVSKRDPADIPWGDYGAEYVVESSGVFTTKEKASAHLKGGAKKVV 207

Query: 687 ISAPSADAPMFVVGVNERTYKPSINIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHS 866
           ISAPSADAPMFVVGVNE+TYKP+++IVSNASCTTNCLAPLAKV+++ FGIVEGLMTTVH+
Sbjct: 208 ISAPSADAPMFVVGVNEKTYKPAMDIVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHA 267

Query: 867 LTATQKTVDGPSSKDWRGGR 926
            TATQKTVDGPS KDWRGGR
Sbjct: 268 TTATQKTVDGPSMKDWRGGR 287



 Score =  112 bits (281), Expect = 9e-23
 Identities = 67/116 (57%), Positives = 80/116 (68%), Gaps = 4/116 (3%)
 Frame = +1

Query: 37  AFSTMIRSTVAASPPSFIESP--KQSFSGNHSLKSAKVQTSVFGNSIQ--VDSLSLQRCS 204
           A ST+  S + AS   F  S   K SF GN    S K+Q+ +FG ++     SL L+  +
Sbjct: 8   ARSTVSSSLIEASRSDFSPSDFRKASFVGN----SLKLQSGLFGTTVSSGASSLQLRSSN 63

Query: 205 GRSIQPIKATATETPPTIPKSWSSGKTKIGINGFGRIGRLVLRIATSRDDIDVVAV 372
            R++QPIKATATE PP I K+  SGKTKIGINGFGRIGRLVLR+ATSRDDIDVVAV
Sbjct: 64  NRTVQPIKATATEAPPAIQKTPRSGKTKIGINGFGRIGRLVLRVATSRDDIDVVAV 119


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