BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000554
         (1793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32444.3| unnamed protein product [Vitis vinifera]              448   e-123
ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding prote...   443   e-122
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...   436   e-119
ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...   436   e-119
ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional ...   427   e-117

>emb|CBI32444.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  448 bits (1152), Expect = e-123
 Identities = 226/314 (71%), Positives = 254/314 (80%)
 Frame = -3

Query: 1401 SEENNKSIWIGDLQYWMDENYLNTCFGQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAA 1222
            S +  K++W+GDL  WMD+NYL TCFG TGEVSSIK+IRNKQTGQSEGYGFV F+SRA A
Sbjct: 4    STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATA 63

Query: 1221 EKILQAYNGTLMPNSEQPFRLNWASFSTGERRGTDVGSDHSIFVGDLAPDVTDILLHETF 1042
            EKIL +YNGTLMPN+EQPFRLNWA+FSTG+RR TD GSD SIFVGDLA DVTD LL ETF
Sbjct: 64   EKILHSYNGTLMPNTEQPFRLNWATFSTGDRR-TDAGSDLSIFVGDLASDVTDALLQETF 122

Query: 1041 ATRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPR 862
            ATRY SVKGAKVV D+NTGRSKGYGFVRF D+NE+SRA++EMNG +CSSRPMRIGVATP+
Sbjct: 123  ATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPK 182

Query: 861  KATGHQQQYSSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQTDDDSANTTIFVGGLD 682
            KA+G+QQQYSSQ                              +Q + DS NTTIFVGGLD
Sbjct: 183  KASGYQQQYSSQ-------------ALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLD 229

Query: 681  PTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEALQNLSGTVIGKQTVRLS 502
              +TDEDLRQ FSQ+GEVVSVKIPVGKGCGFVQFA+RN AE+ALQ L+GTVIGKQTVRLS
Sbjct: 230  SEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLS 289

Query: 501  WGRNPANKQSRTDS 460
            WGRNPA+KQ R DS
Sbjct: 290  WGRNPASKQWRNDS 303


>ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 416

 Score =  443 bits (1139), Expect = e-122
 Identities = 226/316 (71%), Positives = 254/316 (80%), Gaps = 2/316 (0%)
 Frame = -3

Query: 1401 SEENNKSIWIGDLQYWMDENYLNTCFGQTGEV--SSIKVIRNKQTGQSEGYGFVVFYSRA 1228
            S +  K++W+GDL  WMD+NYL TCFG TGEV  SSIK+IRNKQTGQSEGYGFV F+SRA
Sbjct: 76   STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGFVEFFSRA 135

Query: 1227 AAEKILQAYNGTLMPNSEQPFRLNWASFSTGERRGTDVGSDHSIFVGDLAPDVTDILLHE 1048
             AEKIL +YNGTLMPN+EQPFRLNWA+FSTG+RR TD GSD SIFVGDLA DVTD LL E
Sbjct: 136  TAEKILHSYNGTLMPNTEQPFRLNWATFSTGDRR-TDAGSDLSIFVGDLASDVTDALLQE 194

Query: 1047 TFATRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVAT 868
            TFATRY SVKGAKVV D+NTGRSKGYGFVRF D+NE+SRA++EMNG +CSSRPMRIGVAT
Sbjct: 195  TFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVAT 254

Query: 867  PRKATGHQQQYSSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQTDDDSANTTIFVGG 688
            P+KA+G+QQQYSSQ                              +Q + DS NTTIFVGG
Sbjct: 255  PKKASGYQQQYSSQ-------------ALVLAGGNASNGAVAQGSQANGDSTNTTIFVGG 301

Query: 687  LDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEALQNLSGTVIGKQTVR 508
            LD  +TDEDLRQ FSQ+GEVVSVKIPVGKGCGFVQFA+RN AE+ALQ L+GTVIGKQTVR
Sbjct: 302  LDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVR 361

Query: 507  LSWGRNPANKQSRTDS 460
            LSWGRNPA+KQ R DS
Sbjct: 362  LSWGRNPASKQWRNDS 377


>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 409

 Score =  436 bits (1121), Expect = e-119
 Identities = 228/364 (62%), Positives = 262/364 (71%)
 Frame = -3

Query: 1401 SEENNKSIWIGDLQYWMDENYLNTCFGQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAA 1222
            S  +N++IW+GDL  WMDENYL++CF  TGE++S+KVIRNKQTG SEGYGFV F+S AAA
Sbjct: 79   SNADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAA 138

Query: 1221 EKILQAYNGTLMPNSEQPFRLNWASFSTGERRGTDVGSDHSIFVGDLAPDVTDILLHETF 1042
            EK+LQ Y G LMPN++QPFRLNWA+FS G++R +D G D SIFVGDLA DV+D LLHETF
Sbjct: 139  EKVLQGYAGVLMPNTDQPFRLNWATFSMGDKR-SDNGPDLSIFVGDLASDVSDSLLHETF 197

Query: 1041 ATRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPR 862
            A +Y SVK AKVV DANTGRSKGYGFVRF D+NE+S+A+ EMNG +CSSRPMRIG ATPR
Sbjct: 198  AGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPR 257

Query: 861  KATGHQQQYSSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQTDDDSANTTIFVGGLD 682
            K++G+QQQYSS                                Q+D DS NTTIFVGGLD
Sbjct: 258  KSSGYQQQYSSH------------------------------VQSDGDSMNTTIFVGGLD 287

Query: 681  PTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEALQNLSGTVIGKQTVRLS 502
            P ++DEDLRQPFSQYGE+VSVKIPVGKGCGFVQFA+RN AE+ALQ L+GTVIGKQTVRLS
Sbjct: 288  PNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLS 347

Query: 501  WGRNPANKQSRTDSXXXXXXXXXXXXXXXXXXYAPATSQDPNXXXXXXXXXXYPVYGNPQ 322
            WGRNPANKQ R D                   YA     DP           YPVYGN Q
Sbjct: 348  WGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPT--MYAAAYGAYPVYGNHQ 405

Query: 321  QQVS 310
            QQVS
Sbjct: 406  QQVS 409



 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 11/191 (5%)
 Frame = -3

Query: 1419 SIGGSASEEN-NKSIWIGDLQYWMDENYLNTCF-GQTGEVSSIKVIRNKQTGQSEGYGFV 1246
            S+G   S+   + SI++GDL   + ++ L+  F G+   V + KV+ +  TG+S+GYGFV
Sbjct: 165  SMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFV 224

Query: 1245 VFYSRAAAEKILQAYNGTLMPNSEQPFRLNWAS--FSTG--ERRGTDVGSDH-----SIF 1093
             F       + +   NG     S +P R+  A+   S+G  ++  + V SD      +IF
Sbjct: 225  RFGDENERSQAMTEMNGVYC--SSRPMRIGAATPRKSSGYQQQYSSHVQSDGDSMNTTIF 282

Query: 1092 VGDLAPDVTDILLHETFATRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMN 913
            VG L P+V+D  L + F+ +Y  +   K+ +       KG GFV+FA+ N    A+ ++N
Sbjct: 283  VGGLDPNVSDEDLRQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLN 335

Query: 912  GQFCSSRPMRI 880
            G     + +R+
Sbjct: 336  GTVIGKQTVRL 346


>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            2 [Vitis vinifera]
          Length = 418

 Score =  436 bits (1121), Expect = e-119
 Identities = 228/364 (62%), Positives = 262/364 (71%)
 Frame = -3

Query: 1401 SEENNKSIWIGDLQYWMDENYLNTCFGQTGEVSSIKVIRNKQTGQSEGYGFVVFYSRAAA 1222
            S  +N++IW+GDL  WMDENYL++CF  TGE++S+KVIRNKQTG SEGYGFV F+S AAA
Sbjct: 79   SNADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAA 138

Query: 1221 EKILQAYNGTLMPNSEQPFRLNWASFSTGERRGTDVGSDHSIFVGDLAPDVTDILLHETF 1042
            EK+LQ Y G LMPN++QPFRLNWA+FS G++R +D G D SIFVGDLA DV+D LLHETF
Sbjct: 139  EKVLQGYAGVLMPNTDQPFRLNWATFSMGDKR-SDNGPDLSIFVGDLASDVSDSLLHETF 197

Query: 1041 ATRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVATPR 862
            A +Y SVK AKVV DANTGRSKGYGFVRF D+NE+S+A+ EMNG +CSSRPMRIG ATPR
Sbjct: 198  AGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPR 257

Query: 861  KATGHQQQYSSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQTDDDSANTTIFVGGLD 682
            K++G+QQQYSS                                Q+D DS NTTIFVGGLD
Sbjct: 258  KSSGYQQQYSSH---------------------GGYASNGASVQSDGDSMNTTIFVGGLD 296

Query: 681  PTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEALQNLSGTVIGKQTVRLS 502
            P ++DEDLRQPFSQYGE+VSVKIPVGKGCGFVQFA+RN AE+ALQ L+GTVIGKQTVRLS
Sbjct: 297  PNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLS 356

Query: 501  WGRNPANKQSRTDSXXXXXXXXXXXXXXXXXXYAPATSQDPNXXXXXXXXXXYPVYGNPQ 322
            WGRNPANKQ R D                   YA     DP           YPVYGN Q
Sbjct: 357  WGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHDPT--MYAAAYGAYPVYGNHQ 414

Query: 321  QQVS 310
            QQVS
Sbjct: 415  QQVS 418



 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 18/198 (9%)
 Frame = -3

Query: 1419 SIGGSASEEN-NKSIWIGDLQYWMDENYLNTCF-GQTGEVSSIKVIRNKQTGQSEGYGFV 1246
            S+G   S+   + SI++GDL   + ++ L+  F G+   V + KV+ +  TG+S+GYGFV
Sbjct: 165  SMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFV 224

Query: 1245 VFYSRAAAEKILQAYNGTLM-----------PNSEQPFRLNWASFSTGERRGTDVGSDH- 1102
             F       + +   NG              P     ++  ++S       G  V SD  
Sbjct: 225  RFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGD 284

Query: 1101 ----SIFVGDLAPDVTDILLHETFATRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKS 934
                +IFVG L P+V+D  L + F+ +Y  +   K+ +       KG GFV+FA+ N   
Sbjct: 285  SMNTTIFVGGLDPNVSDEDLRQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAE 337

Query: 933  RAIDEMNGQFCSSRPMRI 880
             A+ ++NG     + +R+
Sbjct: 338  DALQKLNGTVIGKQTVRL 355


>ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
            [Glycine max]
          Length = 401

 Score =  427 bits (1098), Expect = e-117
 Identities = 230/367 (62%), Positives = 258/367 (70%)
 Frame = -3

Query: 1410 GSASEENNKSIWIGDLQYWMDENYLNTCFGQTGEVSSIKVIRNKQTGQSEGYGFVVFYSR 1231
            GS  E  NK+IWIGDL +WMDENYL+ CF  TGE+SSIKVIRNKQTG SEGYGFV FYS 
Sbjct: 67   GSGGE--NKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSH 124

Query: 1230 AAAEKILQAYNGTLMPNSEQPFRLNWASFSTGERRGTDVGSDHSIFVGDLAPDVTDILLH 1051
            A AEK+LQ Y G LMPN+EQPFRLNWA+FSTG+ +G+D   D SIFVGDLA DVTD LLH
Sbjct: 125  ATAEKVLQNYAGILMPNAEQPFRLNWATFSTGD-KGSDNVPDLSIFVGDLAADVTDSLLH 183

Query: 1050 ETFATRYQSVKGAKVVIDANTGRSKGYGFVRFADDNEKSRAIDEMNGQFCSSRPMRIGVA 871
            ETFA+ Y SVK AKVV DANTGRSKGYGFVRF DDNE+++A+ +MNG +CSSRPMRIG A
Sbjct: 184  ETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIGAA 243

Query: 870  TPRKATGHQQQYSSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQTDDDSANTTIFVG 691
            TPRK++GHQQ   S                                Q++ DS NTTIFVG
Sbjct: 244  TPRKSSGHQQGGLSN---------------------------GTANQSEADSTNTTIFVG 276

Query: 690  GLDPTITDEDLRQPFSQYGEVVSVKIPVGKGCGFVQFADRNCAEEALQNLSGTVIGKQTV 511
            GLDP ++DEDLRQPFSQYGE+VSVKIPVGKGCGFVQFA+RN AEEALQ L+GT IGKQTV
Sbjct: 277  GLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTV 336

Query: 510  RLSWGRNPANKQSRTDSXXXXXXXXXXXXXXXXXXYAPATSQDPNXXXXXXXXXXYPVYG 331
            RLSWGRNPANKQ R D                   YA     DP+          YP+YG
Sbjct: 337  RLSWGRNPANKQFRMDFGSPWTGAYYGAPMYDGYGYALPPRHDPS--IYAAAYGAYPLYG 394

Query: 330  NPQQQVS 310
              QQQVS
Sbjct: 395  GHQQQVS 401