BLASTX nr result

ID: Coptis21_contig00000548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000548
         (1118 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530870.1| conserved hypothetical protein [Ricinus comm...   290   4e-76
ref|XP_002285688.1| PREDICTED: uncharacterized protein LOC100250...   286   5e-75
ref|XP_002304872.1| predicted protein [Populus trichocarpa] gi|1...   280   4e-73
ref|XP_002875563.1| hypothetical protein ARALYDRAFT_484754 [Arab...   276   5e-72
ref|NP_566858.1| uncharacterized protein [Arabidopsis thaliana] ...   275   2e-71

>ref|XP_002530870.1| conserved hypothetical protein [Ricinus communis]
           gi|223529559|gb|EEF31510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score =  290 bits (742), Expect = 4e-76
 Identities = 149/202 (73%), Positives = 165/202 (81%), Gaps = 6/202 (2%)
 Frame = -3

Query: 999 RRSFPITTTTRKTFINASLIENPVVWASRLCIYYALLKAGLVGSPASPIFS--DSQGSIA 826
           +RSF    T   T  NASL+E PV+WA RLCI+YALLK+GL GS  +P+ S  D  G  A
Sbjct: 58  KRSFATRKTVTTT--NASLLETPVLWAGRLCIFYALLKSGLAGSKTNPLVSGLDGDGESA 115

Query: 825 ----DLGFSKWLEGLQGRSEEKEATDRRKLVRNWHPTTKGTLKRSYRVPSKSAGQRLLKG 658
               DLGFSKWLE +QG+ + KEA DRRKLV  WHPTTKGTL+R+YRVPSKS G+RLLK 
Sbjct: 116 VESGDLGFSKWLENIQGKPD-KEAADRRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKA 174

Query: 657 IASLLSDDDQFIDAATHKGCQIRRESAHGESVCCNNVRALFDELPTPHLVVEITAFPAGP 478
           IASLLSDDD FI+A +HKGCQIRRESAHGESVCCNNVRALFDELPTPHLVVEITAFPAGP
Sbjct: 175 IASLLSDDDHFIEATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLVVEITAFPAGP 234

Query: 477 LTEKDYAKAEKLEKVLRSGASI 412
           LTEKDY KAEKLE+VLRSG SI
Sbjct: 235 LTEKDYVKAEKLERVLRSGPSI 256


>ref|XP_002285688.1| PREDICTED: uncharacterized protein LOC100250156 [Vitis vinifera]
           gi|297746432|emb|CBI16488.3| unnamed protein product
           [Vitis vinifera]
          Length = 230

 Score =  286 bits (733), Expect = 5e-75
 Identities = 141/186 (75%), Positives = 159/186 (85%), Gaps = 5/186 (2%)
 Frame = -3

Query: 954 NASLIENPVVWASRLCIYYALLKAGLVGSPASPIFSDSQGS-----IADLGFSKWLEGLQ 790
           +ASL+E PV+WASR+C++YALLKAGL GS A+P  SD +         DLGFSKWLE LQ
Sbjct: 46  HASLLEAPVLWASRICVFYALLKAGLAGSQANPFVSDLESDGNGDGAGDLGFSKWLESLQ 105

Query: 789 GRSEEKEATDRRKLVRNWHPTTKGTLKRSYRVPSKSAGQRLLKGIASLLSDDDQFIDAAT 610
            R+ EKEA+D+RKLV  WHPTTKGTL+R+YRVPSKS G+RLLK IASLLSDDD FIDA++
Sbjct: 106 -RNPEKEASDKRKLVSKWHPTTKGTLRRNYRVPSKSEGRRLLKAIASLLSDDDHFIDASS 164

Query: 609 HKGCQIRRESAHGESVCCNNVRALFDELPTPHLVVEITAFPAGPLTEKDYAKAEKLEKVL 430
           HKGCQIRRESAHGESVCCNNVRALFDELPTPHL+VEIT FPAGPLTE DY KAEKLEKVL
Sbjct: 165 HKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLTENDYVKAEKLEKVL 224

Query: 429 RSGASI 412
           RSG S+
Sbjct: 225 RSGPSV 230


>ref|XP_002304872.1| predicted protein [Populus trichocarpa] gi|118488609|gb|ABK96117.1|
           unknown [Populus trichocarpa]
           gi|222842304|gb|EEE79851.1| predicted protein [Populus
           trichocarpa]
          Length = 256

 Score =  280 bits (717), Expect = 4e-73
 Identities = 138/189 (73%), Positives = 157/189 (83%), Gaps = 7/189 (3%)
 Frame = -3

Query: 957 INASLIENPVVWASRLCIYYALLKAGLVGSPASPIFSDSQGS-------IADLGFSKWLE 799
           ++ASLIE PV+W  RLCI+YALLKAGL GS A+P+ S   G          DLGFSKW+E
Sbjct: 69  VHASLIEAPVLWVGRLCIFYALLKAGLAGSEANPLVSGLDGGGVGGGAESGDLGFSKWIE 128

Query: 798 GLQGRSEEKEATDRRKLVRNWHPTTKGTLKRSYRVPSKSAGQRLLKGIASLLSDDDQFID 619
            +QG+ + KEA D+RKLV  WHPTTKGTL+R+YRVPSKS GQR LK IA+LLS+DD F+D
Sbjct: 129 AIQGKPD-KEAADKRKLVSKWHPTTKGTLRRNYRVPSKSEGQRRLKAIAALLSEDDYFVD 187

Query: 618 AATHKGCQIRRESAHGESVCCNNVRALFDELPTPHLVVEITAFPAGPLTEKDYAKAEKLE 439
           A +HKGCQIRRESAHGESVCCNNVRALFDELPTPHL+VEITAFPAGPLTEKDY KAEKLE
Sbjct: 188 ATSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLLVEITAFPAGPLTEKDYVKAEKLE 247

Query: 438 KVLRSGASI 412
           +VLRSG SI
Sbjct: 248 RVLRSGPSI 256


>ref|XP_002875563.1| hypothetical protein ARALYDRAFT_484754 [Arabidopsis lyrata subsp.
            lyrata] gi|297321401|gb|EFH51822.1| hypothetical protein
            ARALYDRAFT_484754 [Arabidopsis lyrata subsp. lyrata]
          Length = 248

 Score =  276 bits (707), Expect = 5e-72
 Identities = 135/211 (63%), Positives = 159/211 (75%), Gaps = 7/211 (3%)
 Frame = -3

Query: 1023 FPAFEGALRRSFPITTTTRKTFINASLIENPVVWASRLCIYYALLKAGLVGSPASPIFS- 847
            FP  +  L R F            ASL+E PV+WA R+C++YAL+KAG  GS ++PI S 
Sbjct: 38   FPGSKLTLHRFFRYPKKISNGSARASLLETPVLWAGRICVFYALVKAGFAGSKSNPIVSG 97

Query: 846  ------DSQGSIADLGFSKWLEGLQGRSEEKEATDRRKLVRNWHPTTKGTLKRSYRVPSK 685
                  D +   ADLGFSKWL+ ++G   +K+A D+RKLV  WHPTTKGTL+R+YR+PSK
Sbjct: 98   LDSGGVDVEDDGADLGFSKWLQNIKGNKPDKDAADKRKLVSKWHPTTKGTLRRNYRIPSK 157

Query: 684  SAGQRLLKGIASLLSDDDQFIDAATHKGCQIRRESAHGESVCCNNVRALFDELPTPHLVV 505
            S G RLLK IASLLSDDD F DA +HKGCQIRRESAHG+SVCCNNVRALFDELPTPHLVV
Sbjct: 158  SEGNRLLKAIASLLSDDDHFRDATSHKGCQIRRESAHGQSVCCNNVRALFDELPTPHLVV 217

Query: 504  EITAFPAGPLTEKDYAKAEKLEKVLRSGASI 412
            EIT FPAGPLTE DY KAEKLE++LRSG +I
Sbjct: 218  EITPFPAGPLTENDYLKAEKLERILRSGPNI 248


>ref|NP_566858.1| uncharacterized protein [Arabidopsis thaliana]
            gi|9294365|dbj|BAB02262.1| unnamed protein product
            [Arabidopsis thaliana] gi|15292709|gb|AAK92723.1| unknown
            protein [Arabidopsis thaliana] gi|21281097|gb|AAM45104.1|
            unknown protein [Arabidopsis thaliana]
            gi|332644183|gb|AEE77704.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 249

 Score =  275 bits (702), Expect = 2e-71
 Identities = 134/212 (63%), Positives = 160/212 (75%), Gaps = 8/212 (3%)
 Frame = -3

Query: 1023 FPAFEGALRRSFPITTTTRKTFINASLIENPVVWASRLCIYYALLKAGLVGSPASPIFSD 844
            FP  +  L R F            ASL+E P++WA R+C++YAL+KAG  GS ++PI S 
Sbjct: 38   FPGSKLTLHRIFRYPKKISNGSTRASLLETPILWAGRICVFYALVKAGFAGSKSNPIVSG 97

Query: 843  -SQGSI-------ADLGFSKWLEGLQGRSEEKEATDRRKLVRNWHPTTKGTLKRSYRVPS 688
               G +       ADLGFSKWL+ ++G   +K+A D+RKLV  WHPTTKGTL+R+YR+PS
Sbjct: 98   LDTGGVDVEYDDGADLGFSKWLQNIKGNKPDKDAADKRKLVSKWHPTTKGTLRRNYRIPS 157

Query: 687  KSAGQRLLKGIASLLSDDDQFIDAATHKGCQIRRESAHGESVCCNNVRALFDELPTPHLV 508
            K+ G RLLK IASLLSDDD F DA +HKGCQIRRESAHG+SVCCNNVRALFDELPTPHLV
Sbjct: 158  KAEGNRLLKAIASLLSDDDHFRDATSHKGCQIRRESAHGQSVCCNNVRALFDELPTPHLV 217

Query: 507  VEITAFPAGPLTEKDYAKAEKLEKVLRSGASI 412
            VEIT FPAGPLTE DY KAEKLE++LRSGA+I
Sbjct: 218  VEITPFPAGPLTENDYLKAEKLERILRSGANI 249


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