BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000542
         (1437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g...   293   1e-76
emb|CBI38318.3| unnamed protein product [Vitis vinifera]              289   1e-75
ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|2...   278   3e-72
ref|XP_002513763.1| conserved hypothetical protein [Ricinus comm...   273   8e-71
ref|XP_002513764.1| conserved hypothetical protein [Ricinus comm...   273   1e-70

>ref|XP_002308717.1| f-box family protein [Populus trichocarpa]
            gi|222854693|gb|EEE92240.1| f-box family protein [Populus
            trichocarpa]
          Length = 292

 Score =  293 bits (749), Expect = 1e-76
 Identities = 152/290 (52%), Positives = 192/290 (66%), Gaps = 18/290 (6%)
 Frame = -2

Query: 1007 VLPEGCVTSILSLTSPLDVCVLSLVSSMVKSAADSDVIWEKFLPSNYREIVSTSVSNLNL 828
            VLPEGC+ ++L+ T P D C LS+VSS+ KSA +SD +WE+FLP +Y+ I+ TS S + L
Sbjct: 5    VLPEGCIANVLAFTGPRDACRLSIVSSLFKSAGESDAVWERFLPRDYQSIIFTSDSYVLL 64

Query: 827  NDFTTKKELYFRLCDHPIILEGGTKSFQLEKRSGKKCFMLGAKELGITWGDTPQYWEWKS 648
            +  ++KKELY RLC+ PII++ G KSF L K+SGKKC+ML A++L I WGDTP YW W S
Sbjct: 65   SSLSSKKELYLRLCEKPIIIDDGKKSFSLVKKSGKKCYMLSARDLMIVWGDTPTYWRWNS 124

Query: 647  QPDSRFAEVAGLRSVCWLHIQGKIDTQMLSPNTNYAAYLVFKVTDESYGLHNPTTEGSVQ 468
               SRF EVA L  VCWL I GKI+  MLSP T YAAYLVFK  + +YGL     E  V 
Sbjct: 125  DSSSRFGEVAELIGVCWLEICGKINATMLSPATLYAAYLVFKPKEGAYGLDYQPVEVGVG 184

Query: 467  FVLGGGSASGYRTVYLDYDSNRAPHR---------RHRRSSV---------TQYVGQLPN 342
             V   GS +G R VYLD    RA HR          H RS +         ++  GQ P 
Sbjct: 185  LV---GSENGKRNVYLDSQRGRA-HRYHLVRRRIGLHNRSRIVGMQEPVPASENNGQHPK 240

Query: 341  ARGDGWMEIELGEFYNDQGEDGEVKMTLEEVKTLGWKSGLIVEGMELRPK 192
             RGDGW+EIELGEF+  +GEDGE++M ++EVK+  WK GL VEG+E+RPK
Sbjct: 241  ERGDGWLEIELGEFFCKEGEDGELEMRVQEVKSGDWKGGLTVEGIEIRPK 290


>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  289 bits (739), Expect = 1e-75
 Identities = 147/277 (53%), Positives = 194/277 (70%), Gaps = 1/277 (0%)
 Frame = -2

Query: 1013 FYVLPEGCVTSILSLTSPLDVCVLSLVSSMVKSAADSDVIWEKFLPSNYREIVSTSVSNL 834
            F  LPEGC+  +L+LTSP DVC +S V+S+  SAA+SD +WE+FLP++YREI++ S  + 
Sbjct: 20   FSSLPEGCIADVLALTSPRDVCRMSAVASVFLSAAESDALWERFLPADYREIIARSSESS 79

Query: 833  NLNDFTTKKELYFRLCDHPIILEGGTKSFQLEKRSGKKCFMLGAKELGITWGDTPQYWEW 654
            +   F++KKELYF LCD+P++++ G KSF LEKRSGKKC+ML ++EL I WGDTP YWEW
Sbjct: 80   SWRHFSSKKELYFTLCDYPLLIDEGKKSFWLEKRSGKKCYMLASRELTIIWGDTPGYWEW 139

Query: 653  KSQPDSRFAEVAGLRSVCWLHIQGKIDTQMLSPNTNYAAYLVFKVTDESYGLHNPTTEGS 474
             S P+SRF EVA L++VCW  I+GKI+T MLSP TNYAAYLVF     S+G  +   E S
Sbjct: 140  TSLPESRFPEVAYLQAVCWFEIRGKINTCMLSPRTNYAAYLVFH-AGRSHGFEDVPVESS 198

Query: 473  VQFVLGGGSASGYRTVYL-DYDSNRAPHRRHRRSSVTQYVGQLPNARGDGWMEIELGEFY 297
            ++ V   G+ +  R +YL  Y  N  P      SS+   +   P  R D W EIELGEF+
Sbjct: 199  IEIV---GNETTTRVIYLARYRKNEEP-----TSSIRSDL-PYPKKREDSWFEIELGEFF 249

Query: 296  NDQGEDGEVKMTLEEVKTLGWKSGLIVEGMELRPKGN 186
             + GED E+++TL EVK   WK GLIVEG+E+RPKG+
Sbjct: 250  IEGGEDTELEITLMEVKAGHWKDGLIVEGIEIRPKGD 286


>ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|222865782|gb|EEF02913.1|
            predicted protein [Populus trichocarpa]
          Length = 304

 Score =  278 bits (711), Expect = 3e-72
 Identities = 147/300 (49%), Positives = 189/300 (63%), Gaps = 18/300 (6%)
 Frame = -2

Query: 1037 SGKMQEADFYVLPEGCVTSILSLTSPLDVCVLSLVSSMVKSAADSDVIWEKFLPSNYREI 858
            S + ++    VLPE C+ ++LS T P D C LS+V S+ K+A +SD +WE+FLP +Y+ I
Sbjct: 5    SSREEDMSLDVLPEACIANVLSFTCPRDACRLSMVCSLFKAAEESDFVWERFLPRDYQSI 64

Query: 857  VSTS-VSNLNLNDFTTKKELYFRLCDHPIILEGGTKSFQLEKRSGKKCFMLGAKELGITW 681
            +S S  S++ L   ++KK LY  LC+ P+I+EGG KS  LEK+SGKKC+ML A++L I W
Sbjct: 65   ISKSDASSMLLASASSKKHLYLMLCEKPLIIEGGKKSISLEKKSGKKCYMLSARDLIIVW 124

Query: 680  GDTPQYWEWKSQPDSRFAEVAGLRSVCWLHIQGKIDTQMLSPNTNYAAYLVFKVTDESYG 501
            GDTP YW+W S P SRF EVA L SVCWL I+GKI+  MLSP T Y AYLVF+ T   YG
Sbjct: 125  GDTPTYWKWNSDPSSRFGEVAELISVCWLEIRGKINATMLSPATLYTAYLVFRPTRGLYG 184

Query: 500  LHNPTTEGSVQFVLGGGSASGYRTVYLDYDSNRAP--HRRHRR---------------SS 372
            L     E  V  V   GS  G R VYLD +  R    H   RR                 
Sbjct: 185  LDYQPVEVGVGLV---GSECGMRNVYLDSERGRRQQYHFVSRRIGLFNRCRIVGMPASEP 241

Query: 371  VTQYVGQLPNARGDGWMEIELGEFYNDQGEDGEVKMTLEEVKTLGWKSGLIVEGMELRPK 192
              +  GQ P  R DGW+EIELGEF+  +GED E++M+++EVK   WK GLIVEG+E+RPK
Sbjct: 242  ARENNGQYPKKREDGWLEIELGEFFCKEGEDRELEMSVQEVKGGDWKGGLIVEGIEIRPK 301


>ref|XP_002513763.1| conserved hypothetical protein [Ricinus communis]
            gi|223546849|gb|EEF48346.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 301

 Score =  273 bits (698), Expect = 8e-71
 Identities = 141/292 (48%), Positives = 180/292 (61%), Gaps = 21/292 (7%)
 Frame = -2

Query: 1004 LPEGCVTSILSLTSPLDVCVLSLVSSMVKSAADSDVIWEKFLPSNYREIVSTSVSNLNLN 825
            LPEGC+  ++S T P D C LS VSS  + AA+SD +WEKFLP +Y  I+S S  +  L+
Sbjct: 15   LPEGCIADVVSFTGPFDACRLSTVSSTFRDAANSDTVWEKFLPQDYHSIISRSSDSFLLD 74

Query: 824  DFTTKKELYFRLCDHPIILEGGTKSFQLEKRSGKKCFMLGAKELGITWGDTPQYWEWKSQ 645
             F++KK+LYF LCD+PI+++ G KSF LEK SGKKC+ML A++L I W DTP YW W   
Sbjct: 75   RFSSKKQLYFSLCDNPILIDDGKKSFALEKWSGKKCYMLSARDLKIVWSDTPTYWRWICL 134

Query: 644  PDSRFAEVAGLRSVCWLHIQGKIDTQMLSPNTNYAAYLVFKVTDESYGLHNPTTEGSVQF 465
            PDSRF EVA L SVCWL I  +I+  MLSP+T Y AY VFK T  +YG      E  V  
Sbjct: 135  PDSRFPEVAELISVCWLEISARINISMLSPSTLYTAYFVFKSTTGAYGFEYQPAEAVVGL 194

Query: 464  VLGGGSASGYRTVYLDYDSNRAPHRRHRRSSVTQYVGQL--------------------- 348
            V   GS +    VYLD +      RR R   V + +G L                     
Sbjct: 195  V---GSETCKHNVYLDAERG----RRRRSQIVRRRIGLLNRGRIFGLQASLRNGESDCKY 247

Query: 347  PNARGDGWMEIELGEFYNDQGEDGEVKMTLEEVKTLGWKSGLIVEGMELRPK 192
            P  RGDGW+EIELGEF+  +GEDGE+++++ EVK   WK GL V+G+E+RPK
Sbjct: 248  PKERGDGWLEIELGEFFKKKGEDGELELSVLEVKGGHWKGGLAVQGIEIRPK 299


>ref|XP_002513764.1| conserved hypothetical protein [Ricinus communis]
            gi|223546850|gb|EEF48347.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 301

 Score =  273 bits (697), Expect = 1e-70
 Identities = 142/297 (47%), Positives = 184/297 (61%), Gaps = 22/297 (7%)
 Frame = -2

Query: 1016 DFYVLPEGCVTSILSLTSPLDVCVLSLVSSMVKSAADSDVIWEKFLPSNYREIVSTSVSN 837
            D   LPEGC+  I S T+P D C LS VSS  K+A+ SD +WE FLP +Y  I+S S   
Sbjct: 7    DIQELPEGCIADIFSFTTPRDACNLSTVSSKFKNASLSDTVWESFLPQDYNSIISQSSHP 66

Query: 836  LNLNDFTTKKELYFRLCDHPIILEGGTKSFQLEKRSGKKCFMLGAKELGITWGDTPQYWE 657
              L+  ++KK L+  LC  PII++ G KSF L+KR+GKKC+ML A++L I+WG TP YW 
Sbjct: 67   SLLSSCSSKKHLFLSLCQKPIIIDNGKKSFSLDKRNGKKCYMLSARDLKISWGGTPTYWR 126

Query: 656  WKSQPDSRFAEVAGLRSVCWLHIQGKIDTQMLSPNTNYAAYLVFKVTDESYGLHNPTTEG 477
            W S PDSRF EVA L SVCWL I G I T +LSP+T Y+AYLVFK+ + +YGLH+P  E 
Sbjct: 127  WISDPDSRFGEVAELISVCWLEISGTISTSLLSPSTMYSAYLVFKLNERAYGLHDPPVEA 186

Query: 476  SVQFVLGGGSASGYRTVYLDYDSN-----------RAPHRRHRRSSVTQYV--------- 357
             V+   G GS    R +YLD D+N           R  H     S + +           
Sbjct: 187  IVR--AGDGSEINKRIIYLDADTNLRGVRQEPLLLRTRHGLFGPSDIAEESETPEHSGND 244

Query: 356  GQLPNA--RGDGWMEIELGEFYNDQGEDGEVKMTLEEVKTLGWKSGLIVEGMELRPK 192
            GQ   +  RGDGW+E+ELGEF+N  G   E++M++ EVK   WK GLIV+G+E+RPK
Sbjct: 245  GQQSGSKERGDGWLEVELGEFFNRDGNGEELEMSVLEVKGGKWKGGLIVQGIEIRPK 301