BLASTX nr result

ID: Coptis21_contig00000536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00000536
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194452.1| NB-ARC domain-containing disease resistance pro...   115   5e-24
ref|XP_003539578.1| PREDICTED: probable disease resistance prote...   115   5e-24
gb|ACP30592.1| disease resistance protein [Brassica rapa subsp. ...   112   3e-23
ref|XP_003634660.1| PREDICTED: disease resistance protein At4g27...   110   2e-22
emb|CBI20507.3| unnamed protein product [Vitis vinifera]              110   2e-22

>ref|NP_194452.1| NB-ARC domain-containing disease resistance protein [Arabidopsis
           thaliana] gi|46395628|sp|O81825.1|DRL28_ARATH RecName:
           Full=Probable disease resistance protein At4g27220
           gi|3269283|emb|CAA19716.1| putative protein [Arabidopsis
           thaliana] gi|7269575|emb|CAB79577.1| putative protein
           [Arabidopsis thaliana] gi|91806732|gb|ABE66093.1|
           disease resistance protein [Arabidopsis thaliana]
           gi|332659912|gb|AEE85312.1| NB-ARC domain-containing
           disease resistance protein [Arabidopsis thaliana]
          Length = 919

 Score =  115 bits (287), Expect = 5e-24
 Identities = 65/149 (43%), Positives = 86/149 (57%), Gaps = 3/149 (2%)
 Frame = +2

Query: 2   IVLTTRSLAVCEGMCQKE-VKVELLSKDEAWELFEKNVEEVG--PXXXXXXXXXXXXXXX 172
           +VLT+R L VC+ M   E +KV  L + EAWELF  NV EV                   
Sbjct: 248 VVLTSRRLEVCQQMMTNENIKVACLQEKEAWELFCHNVGEVANSDNVKPIAKDVSHECCG 307

Query: 173 LPLAIITVGKAMRRKTNVKEWQLALIDLQERSLNMAMEEKVIQRLRFSYDQLSENHQKCF 352
           LPLAIIT+G+ +R K  V+ W+  L  L+  + ++  EEK+   L+ SYD L +N + CF
Sbjct: 308 LPLAIITIGRTLRGKPQVEVWKHTLNLLKRSAPSIDTEEKIFGTLKLSYDFLQDNMKSCF 367

Query: 353 LYCALYPEDSKINTSRLIEYWVLEGLVKG 439
           L+CAL+PED  I  S LI YWV EGL+ G
Sbjct: 368 LFCALFPEDYSIKVSELIMYWVAEGLLDG 396


>ref|XP_003539578.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Glycine max]
          Length = 962

 Score =  115 bits (287), Expect = 5e-24
 Identities = 70/152 (46%), Positives = 95/152 (62%), Gaps = 6/152 (3%)
 Frame = +2

Query: 2   IVLTTRSLAVCEGM-CQKEVKVELLSKDEAWELFEKNVEE---VGPXXXXXXXXXXXXXX 169
           +VLT+RSL VC  M CQ  VKVE L+K+EAW LF  N+ +   + P              
Sbjct: 272 LVLTSRSLEVCRRMNCQNNVKVEPLAKEEAWTLFLDNLGQQTTLSPEVTKVARSVAKECA 331

Query: 170 XLPLAIITVGKAMRRKTNVKEWQLALIDLQERSLNMA-MEEKVIQRLRFSYDQLSENH-Q 343
            LPLAIIT+ ++MR    + EW+ AL +L+   + +  ME +V++ L+FSYD L++N  Q
Sbjct: 332 GLPLAIITMARSMRGVEEICEWRHALEELRNTEIRLEEMEMEVLRVLQFSYDHLNDNMLQ 391

Query: 344 KCFLYCALYPEDSKINTSRLIEYWVLEGLVKG 439
           KCFL CALYPED +I+   LIE +V EGLV G
Sbjct: 392 KCFLCCALYPEDFEIDRDVLIESFVDEGLVNG 423


>gb|ACP30592.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 852

 Score =  112 bits (280), Expect = 3e-23
 Identities = 66/153 (43%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
 Frame = +2

Query: 2   IVLTTRSLAVCEGM-CQKEVKVELLSKDEAWELFEKNVEEVG----PXXXXXXXXXXXXX 166
           IV TTRS  VC  M    E+K++ L+++EAWELF+  V EV     P             
Sbjct: 282 IVFTTRSKEVCRDMRADDELKMDCLTRNEAWELFQNAVGEVRLKGHPDIPTLAKQICEKC 341

Query: 167 XXLPLAIITVGKAMRRKTNVKEWQLALIDLQERSLNM-AMEEKVIQRLRFSYDQLSENHQ 343
             LPLA+  +GKAM  K +V EW+ A+  L+  S     ME+K++  L+FSYD L +   
Sbjct: 342 YGLPLALNVIGKAMSCKEDVHEWRDAIDVLKTSSDKFPGMEKKILSILKFSYDGLEDEKV 401

Query: 344 K-CFLYCALYPEDSKINTSRLIEYWVLEGLVKG 439
           K CFLYC+L+PED +I    LIEYW+ EG +KG
Sbjct: 402 KSCFLYCSLFPEDYEITKEELIEYWISEGFIKG 434


>ref|XP_003634660.1| PREDICTED: disease resistance protein At4g27190-like [Vitis
           vinifera]
          Length = 1003

 Score =  110 bits (274), Expect = 2e-22
 Identities = 62/149 (41%), Positives = 88/149 (59%), Gaps = 5/149 (3%)
 Frame = +2

Query: 2   IVLTTRSLAVCEGM-CQKEVKVELLSKDEAWELFEKNVEEVG--PXXXXXXXXXXXXXXX 172
           I+LTTR L VC GM   +E+ + +L+ DEAW+LF KN  E                    
Sbjct: 282 IILTTRFLNVCRGMKTDREIPIHVLNDDEAWKLFCKNAGEAAILEDVEPVARAITKECGG 341

Query: 173 LPLAIITVGKAMRRKTNVKEWQLALIDLQERSLN--MAMEEKVIQRLRFSYDQLSENHQK 346
           LPLAI  +G +MR+KT+  +W+ AL +LQ    +    +E++V + L++SYD L  N Q 
Sbjct: 342 LPLAINMMGTSMRKKTSKHQWEHALKELQRSVPHNIYGVEDRVYKPLKWSYDSLQGNIQS 401

Query: 347 CFLYCALYPEDSKINTSRLIEYWVLEGLV 433
           CFLYC+LYPED  I  S L++ W+ EGL+
Sbjct: 402 CFLYCSLYPEDFSIKISELVQCWLGEGLL 430


>emb|CBI20507.3| unnamed protein product [Vitis vinifera]
          Length = 737

 Score =  110 bits (274), Expect = 2e-22
 Identities = 62/149 (41%), Positives = 88/149 (59%), Gaps = 5/149 (3%)
 Frame = +2

Query: 2   IVLTTRSLAVCEGM-CQKEVKVELLSKDEAWELFEKNVEEVG--PXXXXXXXXXXXXXXX 172
           I+LTTR L VC GM   +E+ + +L+ DEAW+LF KN  E                    
Sbjct: 282 IILTTRFLNVCRGMKTDREIPIHVLNDDEAWKLFCKNAGEAAILEDVEPVARAITKECGG 341

Query: 173 LPLAIITVGKAMRRKTNVKEWQLALIDLQERSLN--MAMEEKVIQRLRFSYDQLSENHQK 346
           LPLAI  +G +MR+KT+  +W+ AL +LQ    +    +E++V + L++SYD L  N Q 
Sbjct: 342 LPLAINMMGTSMRKKTSKHQWEHALKELQRSVPHNIYGVEDRVYKPLKWSYDSLQGNIQS 401

Query: 347 CFLYCALYPEDSKINTSRLIEYWVLEGLV 433
           CFLYC+LYPED  I  S L++ W+ EGL+
Sbjct: 402 CFLYCSLYPEDFSIKISELVQCWLGEGLL 430


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